RNA–Protein interactions for RNA: YLR058C

SHM2, Transcript of Cytosolic serine hydroxymethyltransferase, yeastyeast

Gene SHM2, Length 1,410 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHM2YLR058C MET13P53128 600 aa10.99□□□□□ -0.65
SHM2YLR058C SXM1Q04175 944 aaKnown RBP10.99□□□□□ -0.65
SHM2YLR058C MRI1Q06489 411 aaKnown RBP10.99□□□□□ -0.65
SHM2YLR058C GPM2Q12008 311 aa10.99□□□□□ -0.65
SHM2YLR058C APM4Q99186 491 aa10.99□□□□□ -0.65
SHM2YLR058C ATP1P07251 545 aaKnown RBP10.98□□□□□ -0.65
SHM2YLR058C PUT4P15380 627 aa10.98□□□□□ -0.65
SHM2YLR058C VPH1P32563 840 aaKnown RBP10.98□□□□□ -0.65
SHM2YLR058C SEG2P34250 1132 aa10.98□□□□□ -0.65
SHM2YLR058C FMP10P40098 244 aa10.98□□□□□ -0.65
SHM2YLR058C PFD1P46988 109 aa10.98□□□□□ -0.65
SHM2YLR058C ADA2Q02336 434 aa10.98□□□□□ -0.65
SHM2YLR058C YML083CQ04526 418 aa10.98□□□□□ -0.65
SHM2YLR058C MRN1Q08925 612 aaKnown RBP RIP-Chip data10.98□□□□□ -0.65not detected
SHM2YLR058C TAF10Q12030 206 aa10.98□□□□□ -0.65
SHM2YLR058C SPO21Q12411 609 aa10.98□□□□□ -0.65
SHM2YLR058C AHC1Q12433 566 aa10.98□□□□□ -0.65
SHM2YLR058C SEC1P30619 724 aaKnown RBP10.97□□□□□ -0.65
SHM2YLR058C PEP7P32609 515 aa10.97□□□□□ -0.65
SHM2YLR058C YBL055CP34220 418 aaPredicted RBP10.97□□□□□ -0.65
SHM2YLR058C MAL13P53338 473 aa10.97□□□□□ -0.65
SHM2YLR058C PRM6Q04705 352 aa10.97□□□□□ -0.65
SHM2YLR058C AIM39Q08223 395 aa10.97□□□□□ -0.65
SHM2YLR058C KGD2P19262 463 aaPredicted RBP10.96□□□□□ -0.65
SHM2YLR058C CAP1P28495 268 aaKnown RBP10.96□□□□□ -0.65
SHM2YLR058C SRB2P34162 210 aa10.96□□□□□ -0.65
SHM2YLR058C PCM1P38628 557 aaKnown RBP10.96□□□□□ -0.65
SHM2YLR058C APM2P38700 605 aa10.96□□□□□ -0.65
SHM2YLR058C PMC1P38929 1173 aaPredicted RBP10.96□□□□□ -0.65
SHM2YLR058C TGL3P40308 642 aa10.96□□□□□ -0.65
SHM2YLR058C FAF1P40546 346 aaPredicted RBP10.96□□□□□ -0.65
SHM2YLR058C TAF9Q05027 157 aa10.96□□□□□ -0.65
SHM2YLR058C RCL1Q08096 367 aaPredicted RBP10.96□□□□□ -0.65
SHM2YLR058C HRT3Q12347 344 aa10.96□□□□□ -0.65
SHM2YLR058C ZRT2Q12436 422 aa10.96□□□□□ -0.65
SHM2YLR058C NOP14Q99207 810 aaKnown RBP10.96□□□□□ -0.65
SHM2YLR058C TRX1P22217 103 aaKnown RBP10.95□□□□□ -0.66
SHM2YLR058C BYE1P36106 594 aa10.95□□□□□ -0.66
SHM2YLR058C YBR056WP38081 501 aa10.95□□□□□ -0.66
SHM2YLR058C MAD1P40957 749 aa10.95□□□□□ -0.66
SHM2YLR058C NOG2P53742 486 aaKnown RBP10.95□□□□□ -0.66
SHM2YLR058C EAR1Q03212 550 aa10.95□□□□□ -0.66
SHM2YLR058C HEH2Q03281 663 aa10.95□□□□□ -0.66
SHM2YLR058C URH1Q04179 340 aa10.95□□□□□ -0.66
SHM2YLR058C UFO1Q04511 668 aa10.95□□□□□ -0.66
SHM2YLR058C IVY1Q04934 453 aa10.95□□□□□ -0.66
SHM2YLR058C DDC1Q08949 612 aa10.95□□□□□ -0.66
SHM2YLR058C LEA1Q08963 238 aaPredicted RBP10.95□□□□□ -0.66
SHM2YLR058C YRR1Q12172 810 aa10.95□□□□□ -0.66
SHM2YLR058C AEP2P22136 580 aa10.94□□□□□ -0.66
SHM2YLR058C SIF2P38262 535 aa10.94□□□□□ -0.66
SHM2YLR058C SWC5P38326 303 aa10.94□□□□□ -0.66
SHM2YLR058C RAD55P38953 406 aa10.94□□□□□ -0.66
SHM2YLR058C YIR016WP40572 265 aa10.94□□□□□ -0.66
SHM2YLR058C TAF1P46677 1066 aa10.94□□□□□ -0.66
SHM2YLR058C RPC17P47076 161 aa10.94□□□□□ -0.66
SHM2YLR058C INP52P50942 1183 aa10.94□□□□□ -0.66
SHM2YLR058C YPL062WQ02781 134 aa10.94□□□□□ -0.66
SHM2YLR058C RRB1Q04225 511 aaKnown RBP10.94□□□□□ -0.66
SHM2YLR058C ECI1Q05871 280 aa10.94□□□□□ -0.66
SHM2YLR058C NBP2Q12163 236 aa10.94□□□□□ -0.66
SHM2YLR058C SFI1Q12369 946 aa10.94□□□□□ -0.66
SHM2YLR058C PDR1P12383 1068 aa10.93□□□□□ -0.66
SHM2YLR058C RAD27P26793 382 aa10.93□□□□□ -0.66
SHM2YLR058C MET4P32389 672 aa10.93□□□□□ -0.66
SHM2YLR058C GCG1P32656 232 aaKnown RBP10.93□□□□□ -0.66
SHM2YLR058C YIL054WP40524 105 aa10.93□□□□□ -0.66
SHM2YLR058C RIM8P53179 542 aa10.93□□□□□ -0.66
SHM2YLR058C ELP3Q02908 557 aaKnown RBP10.93□□□□□ -0.66
SHM2YLR058C VTI1Q04338 217 aa10.93□□□□□ -0.66
SHM2YLR058C AIM41Q12032 185 aa10.93□□□□□ -0.66
SHM2YLR058C VPS5Q92331 675 aa10.93□□□□□ -0.66
SHM2YLR058C MAS1P10507 462 aa10.92□□□□□ -0.66
SHM2YLR058C IDI1P15496 288 aa10.92□□□□□ -0.66
SHM2YLR058C SFL1P20134 766 aa10.92□□□□□ -0.66
SHM2YLR058C PGS1P25578 521 aa10.92□□□□□ -0.66
SHM2YLR058C URK1P27515 501 aa10.92□□□□□ -0.66
SHM2YLR058C RGD1P38339 666 aa10.92□□□□□ -0.66
SHM2YLR058C STB5P38699 743 aa10.92□□□□□ -0.66
SHM2YLR058C END3P39013 349 aa10.92□□□□□ -0.66
SHM2YLR058C AVT2P39981 480 aa10.92□□□□□ -0.66
SHM2YLR058C MMF1P40185 145 aaKnown RBP10.92□□□□□ -0.66
SHM2YLR058C KHA1P40309 873 aa10.92□□□□□ -0.66
SHM2YLR058C CDC1P40986 491 aa10.92□□□□□ -0.66
SHM2YLR058C APC5Q08683 685 aa10.92□□□□□ -0.66
SHM2YLR058C RMP1Q12530 201 aa10.92□□□□□ -0.66
SHM2YLR058C TUB3P09734 445 aaKnown RBP10.92□□□□□ -0.66
SHM2YLR058C PMS1P14242 873 aa10.92□□□□□ -0.66
SHM2YLR058C HSL7P38274 827 aa10.92□□□□□ -0.66
SHM2YLR058C LYS9P38999 446 aa10.92□□□□□ -0.66
SHM2YLR058C CCT4P39078 528 aaKnown RBP10.92□□□□□ -0.66
SHM2YLR058C GUF1P46943 645 aa10.92□□□□□ -0.66
SHM2YLR058C PRP31P49704 494 aaPredicted RBP10.92□□□□□ -0.66
SHM2YLR058C MTG1Q03151 367 aaPredicted RBP10.92□□□□□ -0.66
SHM2YLR058C YMR187CQ03236 431 aa10.92□□□□□ -0.66
SHM2YLR058C TDA9Q04545 1251 aa10.92□□□□□ -0.66
SHM2YLR058C ATG23Q06671 453 aa10.92□□□□□ -0.66
SHM2YLR058C SAM3Q08986 587 aa10.92□□□□□ -0.66
SHM2YLR058C POL3P15436 1097 aa10.91□□□□□ -0.66
SHM2YLR058C RRP1P35178 278 aaPredicted RBP10.91□□□□□ -0.66
Retrieved 100 of 5,963 RNA–protein pairs in 35.1 ms