RNA–Protein interactions for RNA: YKL197C

PEX1, Transcript of AAA-peroxin, yeast

Gene PEX1, Length 3,132 nt, Biotype protein coding, Subcellular localisation Peroxisome .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PEX1	YKL197C	YRF1-2	P40105	1681 aa		3.6	□□□□□ -1.83
PEX1	YKL197C	TY3B-I	Q7LHG5	1498 aa	Known RBP	3.6	□□□□□ -1.83
PEX1	YKL197C	RPS3	P05750	240 aa	Known RBP	3.6	□□□□□ -1.83
PEX1	YKL197C	SUI3	P09064	285 aa	Known RBP	3.6	□□□□□ -1.83
PEX1	YKL197C	LAT1	P12695	482 aa	Known RBP	3.6	□□□□□ -1.83
PEX1	YKL197C	PCT1	P13259	424 aa		3.6	□□□□□ -1.83
PEX1	YKL197C	ENA1	P13587	1091 aa		3.6	□□□□□ -1.83
PEX1	YKL197C	OM45	P16547	393 aa		3.6	□□□□□ -1.83
PEX1	YKL197C	PRP9	P19736	530 aa	Known RBP	3.6	□□□□□ -1.83
PEX1	YKL197C	YAP1	P19880	650 aa	Known RBP	3.6	□□□□□ -1.83
PEX1	YKL197C	SPS22	P25380	463 aa		3.6	□□□□□ -1.83
PEX1	YKL197C	MGM1	P32266	881 aa		3.6	□□□□□ -1.83
PEX1	YKL197C	STV1	P37296	890 aa		3.6	□□□□□ -1.83
PEX1	YKL197C	CCZ1	P38273	704 aa		3.6	□□□□□ -1.83
PEX1	YKL197C	COS111	P38308	924 aa		3.6	□□□□□ -1.83
PEX1	YKL197C	VPS8	P39702	1274 aa		3.6	□□□□□ -1.83
PEX1	YKL197C	GYP8	P43570	497 aa		3.6	□□□□□ -1.83
PEX1	YKL197C	AIP1	P46680	615 aa	Known RBP	3.6	□□□□□ -1.83
PEX1	YKL197C	ESBP6	P53918	673 aa		3.6	□□□□□ -1.83
PEX1	YKL197C	SSL2	Q00578	843 aa		3.6	□□□□□ -1.83
PEX1	YKL197C	ENA2	Q01896	1091 aa		3.6	□□□□□ -1.83
PEX1	YKL197C	HMO1	Q03973	246 aa	Known RBP	3.6	□□□□□ -1.83
PEX1	YKL197C	FMP40	Q08968	688 aa	Predicted RBP	3.6	□□□□□ -1.83
PEX1	YKL197C	ENA5	Q12691	1091 aa		3.6	□□□□□ -1.83
PEX1	YKL197C	FRT1	Q99332	602 aa		3.6	□□□□□ -1.83
PEX1	YKL197C	PFK2	P16862	959 aa	Known RBP RIP-Chip data	3.59	□□□□□ -1.83	not detected
PEX1	YKL197C	IMP2'	P32351	346 aa		3.59	□□□□□ -1.83
PEX1	YKL197C	HIR1	P32479	840 aa		3.59	□□□□□ -1.83
PEX1	YKL197C	BOL3	P39724	118 aa		3.59	□□□□□ -1.83
PEX1	YKL197C	GPP1	P41277	250 aa	Known RBP	3.59	□□□□□ -1.83
PEX1	YKL197C	MDV1	P47025	714 aa		3.59	□□□□□ -1.83
PEX1	YKL197C	YJR120W	P47157	116 aa		3.59	□□□□□ -1.83
PEX1	YKL197C	SGM1	P47166	707 aa		3.59	□□□□□ -1.83
PEX1	YKL197C	VMA10	P48836	114 aa	Known RBP	3.59	□□□□□ -1.83
PEX1	YKL197C	YNL193W	P53870	558 aa		3.59	□□□□□ -1.83
PEX1	YKL197C	PTA1	Q01329	785 aa	Predicted RBP	3.59	□□□□□ -1.83
PEX1	YKL197C	RRN5	Q02983	363 aa		3.59	□□□□□ -1.83
PEX1	YKL197C	SND1	Q04007	877 aa		3.59	□□□□□ -1.83
PEX1	YKL197C	SYT1	Q06836	1226 aa		3.59	□□□□□ -1.83
PEX1	YKL197C	TSR1	Q07381	788 aa	Known RBP	3.59	□□□□□ -1.83
PEX1	YKL197C	MET7	Q08645	548 aa		3.59	□□□□□ -1.83
PEX1	YKL197C	APC11	Q12157	165 aa		3.59	□□□□□ -1.83
PEX1	YKL197C	MED1	Q12321	566 aa		3.59	□□□□□ -1.83
PEX1	YKL197C	SFI1	Q12369	946 aa		3.59	□□□□□ -1.83
PEX1	YKL197C	CDC16	P09798	840 aa		3.59	□□□□□ -1.83
PEX1	YKL197C	LCB1	P25045	558 aa	Known RBP	3.59	□□□□□ -1.83
PEX1	YKL197C	SEC21	P32074	935 aa	Known RBP	3.59	□□□□□ -1.83
PEX1	YKL197C	CBF2	P32504	956 aa		3.59	□□□□□ -1.83
PEX1	YKL197C	SCT1	P32784	759 aa		3.59	□□□□□ -1.83
PEX1	YKL197C	MGM101	P32787	269 aa	Known RBP	3.59	□□□□□ -1.83
PEX1	YKL197C	RPT1	P33299	467 aa	Known RBP	3.59	□□□□□ -1.83
PEX1	YKL197C	SEG2	P34250	1132 aa		3.59	□□□□□ -1.83
PEX1	YKL197C	YHL050C	P38721	697 aa		3.59	□□□□□ -1.83
PEX1	YKL197C	ROK1	P45818	564 aa	Predicted RBP	3.59	□□□□□ -1.83
PEX1	YKL197C	SKP1	P52286	194 aa		3.59	□□□□□ -1.83
PEX1	YKL197C	MAK10	Q02197	733 aa		3.59	□□□□□ -1.83
PEX1	YKL197C	DML1	Q03652	475 aa		3.59	□□□□□ -1.83
PEX1	YKL197C	CUE5	Q08412	411 aa	Known RBP	3.59	□□□□□ -1.83
PEX1	YKL197C	AVL9	Q12500	764 aa		3.59	□□□□□ -1.83
PEX1	YKL197C	HTZ1	Q12692	134 aa	Known RBP	3.59	□□□□□ -1.83
PEX1	YKL197C	CIT1	P00890	479 aa		3.59	□□□□□ -1.84
PEX1	YKL197C	CTT1	P06115	562 aa		3.59	□□□□□ -1.84
PEX1	YKL197C	MRPS28	P21771	286 aa		3.59	□□□□□ -1.84
PEX1	YKL197C	APM3	P38153	483 aa		3.59	□□□□□ -1.84
PEX1	YKL197C	YBR242W	P38331	238 aa		3.59	□□□□□ -1.84
PEX1	YKL197C	TIF5	P38431	405 aa	Known RBP	3.59	□□□□□ -1.84
PEX1	YKL197C	TDA3	P38758	523 aa		3.59	□□□□□ -1.84
PEX1	YKL197C	SYG1	P40528	902 aa		3.59	□□□□□ -1.84
PEX1	YKL197C	HSH155	P49955	971 aa	Known RBP	3.59	□□□□□ -1.84
PEX1	YKL197C	LSG1	P53145	640 aa	Known RBP	3.59	□□□□□ -1.84
PEX1	YKL197C	IPI3	P53877	555 aa		3.59	□□□□□ -1.84
PEX1	YKL197C	KRE33	P53914	1056 aa	Known RBP	3.59	□□□□□ -1.84
PEX1	YKL197C	RPN9	Q04062	393 aa	Known RBP	3.59	□□□□□ -1.84
PEX1	YKL197C	SPC24	Q04477	213 aa		3.59	□□□□□ -1.84
PEX1	YKL197C	GAD1	Q04792	585 aa		3.59	□□□□□ -1.84
PEX1	YKL197C	ECM7	Q06200	448 aa		3.59	□□□□□ -1.84
PEX1	YKL197C	REH1	Q06709	432 aa		3.59	□□□□□ -1.84
PEX1	YKL197C	SOG2	Q08817	791 aa		3.59	□□□□□ -1.84
PEX1	YKL197C	MSC6	Q08818	692 aa	Known RBP	3.59	□□□□□ -1.84
PEX1	YKL197C	TRL1	P09880	827 aa	Known RBP	3.58	□□□□□ -1.84
PEX1	YKL197C	RSR1	P13856	272 aa		3.58	□□□□□ -1.84
PEX1	YKL197C	SPE2	P21182	396 aa		3.58	□□□□□ -1.84
PEX1	YKL197C	DMC1	P25453	334 aa		3.58	□□□□□ -1.84
PEX1	YKL197C	SPB1	P25582	841 aa	Predicted RBP	3.58	□□□□□ -1.84
PEX1	YKL197C	NAM7	P30771	971 aa	Known RBP	3.58	□□□□□ -1.84
PEX1	YKL197C	RIM4	P38741	713 aa		3.58	□□□□□ -1.84
PEX1	YKL197C	TMA108	P40462	946 aa		3.58	□□□□□ -1.84
PEX1	YKL197C	VPS53	P47061	822 aa		3.58	□□□□□ -1.84
PEX1	YKL197C	YNL146W	P53906	100 aa		3.58	□□□□□ -1.84
PEX1	YKL197C	IRC4	Q03036	179 aa		3.58	□□□□□ -1.84
PEX1	YKL197C	USA1	Q03714	838 aa		3.58	□□□□□ -1.84
PEX1	YKL197C	YLR287C	Q05881	355 aa		3.58	□□□□□ -1.84
PEX1	YKL197C	YCS4	Q06156	1176 aa		3.58	□□□□□ -1.84
PEX1	YKL197C	RPP2B	P02400	110 aa	Known RBP	3.58	□□□□□ -1.84
PEX1	YKL197C	PRP5	P21372	849 aa	Predicted RBP	3.58	□□□□□ -1.84
PEX1	YKL197C	RPT5	P33297	434 aa	Known RBP	3.58	□□□□□ -1.84
PEX1	YKL197C	HSP78	P33416	811 aa		3.58	□□□□□ -1.84
PEX1	YKL197C	RFC1	P38630	861 aa	Known RBP	3.58	□□□□□ -1.84
PEX1	YKL197C	JJJ3	P47138	172 aa		3.58	□□□□□ -1.84
PEX1	YKL197C	YNR029C	P53729	429 aa	Known RBP	3.58	□□□□□ -1.84

Retrieved 100 of 5,963 RNA–protein pairs in 18 ms