RNA–Protein interactions for RNA: YJR060W

CBF1, Transcript of Basic helix-loop-helix (bHLH) protein, yeastyeast

Gene CBF1, Length 1,056 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CBF1YJR060W PEX6P33760 1030 aa5.92□□□□□ -1.46
CBF1YJR060W SUL1P38359 859 aa5.92□□□□□ -1.46
CBF1YJR060W GDH3P39708 457 aa5.92□□□□□ -1.46
CBF1YJR060W ASE1P50275 885 aa5.92□□□□□ -1.46
CBF1YJR060W VPS62P53285 467 aa5.92□□□□□ -1.46
CBF1YJR060W RET3P53600 189 aa5.92□□□□□ -1.46
CBF1YJR060W NPL3Q01560 414 aaKnown RBP RIP-Chip data5.92□□□□□ -1.46not detected
CBF1YJR060W MFM1Q02783 413 aa5.92□□□□□ -1.46
CBF1YJR060W VPS20Q04272 221 aa5.92□□□□□ -1.46
CBF1YJR060W ISA1Q07821 250 aaPredicted RBP5.92□□□□□ -1.46
CBF1YJR060W RCL1Q08096 367 aaPredicted RBP5.92□□□□□ -1.46
CBF1YJR060W YPL150WQ12152 901 aa5.92□□□□□ -1.46
CBF1YJR060W GET3Q12154 354 aaKnown RBP5.92□□□□□ -1.46
CBF1YJR060W TIP41Q12199 356 aa5.92□□□□□ -1.46
CBF1YJR060W GLT1Q12680 2145 aaKnown RBP5.92□□□□□ -1.46
CBF1YJR060W HSP82P02829 709 aaKnown RBP5.91□□□□□ -1.46
CBF1YJR060W CPA2P03965 1118 aaKnown RBP5.91□□□□□ -1.46
CBF1YJR060W PHR1P05066 565 aaKnown RBP RIP-Chip data5.91□□□□□ -1.46not detected
CBF1YJR060W PGI1P12709 554 aaKnown RBP5.91□□□□□ -1.46
CBF1YJR060W THR4P16120 514 aaKnown RBP5.91□□□□□ -1.46
CBF1YJR060W MCM4P30665 933 aaKnown RBP5.91□□□□□ -1.46
CBF1YJR060W AIM26P32858 118 aa5.91□□□□□ -1.46
CBF1YJR060W TFC4P33339 1025 aa5.91□□□□□ -1.46
CBF1YJR060W HSP78P33416 811 aa5.91□□□□□ -1.46
CBF1YJR060W SHP1P34223 423 aa5.91□□□□□ -1.46
CBF1YJR060W PRX1P34227 261 aaKnown RBP5.91□□□□□ -1.46
CBF1YJR060W NDT80P38830 627 aa5.91□□□□□ -1.46
CBF1YJR060W CNM67P53865 581 aaKnown RBP5.91□□□□□ -1.46
CBF1YJR060W PTA1Q01329 785 aaPredicted RBP5.91□□□□□ -1.46
CBF1YJR060W BUL2Q03758 920 aaKnown RBP5.91□□□□□ -1.46
CBF1YJR060W CSM3Q04659 317 aa5.91□□□□□ -1.46
CBF1YJR060W RSC58Q07979 502 aa5.91□□□□□ -1.46
CBF1YJR060W RSB1Q08417 382 aa5.91□□□□□ -1.46
CBF1YJR060W GNT1Q12096 491 aa5.91□□□□□ -1.46
CBF1YJR060W ERP3Q12403 225 aa5.91□□□□□ -1.46
CBF1YJR060W NBL1Q3E7Y6 73 aa5.91□□□□□ -1.46
CBF1YJR060W HBN1Q96VH4 193 aa5.91□□□□□ -1.46
CBF1YJR060W BIK1P11709 440 aa5.9□□□□□ -1.46
CBF1YJR060W HBS1P32769 611 aaKnown RBP5.9□□□□□ -1.46
CBF1YJR060W BAP2P38084 609 aa5.9□□□□□ -1.46
CBF1YJR060W YBR284WP38150 797 aa5.9□□□□□ -1.46
CBF1YJR060W NPA3P47122 385 aa5.9□□□□□ -1.46
CBF1YJR060W RTC4P53850 401 aa5.9□□□□□ -1.46
CBF1YJR060W SLD5Q03406 294 aa5.9□□□□□ -1.46
CBF1YJR060W SMD2Q06217 110 aaKnown RBP5.9□□□□□ -1.46
CBF1YJR060W SPP382Q06411 708 aaPredicted RBP5.9□□□□□ -1.46
CBF1YJR060W LSP1Q12230 341 aaKnown RBP5.9□□□□□ -1.46
CBF1YJR060W PGK1P00560 416 aaKnown RBP5.89□□□□□ -1.47
CBF1YJR060W TOP3P13099 656 aa5.89□□□□□ -1.47
CBF1YJR060W POX1P13711 748 aa5.89□□□□□ -1.47
CBF1YJR060W SNA3P14359 133 aa5.89□□□□□ -1.47
CBF1YJR060W ALG1P16661 449 aa5.89□□□□□ -1.47
CBF1YJR060W SNF5P18480 905 aa5.89□□□□□ -1.47
CBF1YJR060W AAR2P32357 355 aaPredicted RBP5.89□□□□□ -1.47
CBF1YJR060W DOM34P33309 386 aa5.89□□□□□ -1.47
CBF1YJR060W POL12P38121 705 aaPredicted RBP5.89□□□□□ -1.47
CBF1YJR060W REG2P38232 338 aa5.89□□□□□ -1.47
CBF1YJR060W RFC5P38251 354 aa5.89□□□□□ -1.47
CBF1YJR060W PIK1P39104 1066 aa5.89□□□□□ -1.47
CBF1YJR060W HMF1P40037 129 aaKnown RBP5.89□□□□□ -1.47
CBF1YJR060W AIM21P40563 679 aa5.89□□□□□ -1.47
CBF1YJR060W FOL2P51601 243 aaKnown RBP5.89□□□□□ -1.47
CBF1YJR060W PIL1P53252 339 aaKnown RBP5.89□□□□□ -1.47
CBF1YJR060W PHM6Q05637 104 aa5.89□□□□□ -1.47
CBF1YJR060W LPX1Q12405 387 aaKnown RBP5.89□□□□□ -1.47
CBF1YJR060W TRM11Q12463 433 aa5.89□□□□□ -1.47
CBF1YJR060W TAO3P40468 2376 aa5.88□□□□□ -1.47
CBF1YJR060W ILV1P00927 576 aaKnown RBP5.88□□□□□ -1.47
CBF1YJR060W CDC6P09119 513 aa5.88□□□□□ -1.47
CBF1YJR060W GSY1P23337 708 aa5.88□□□□□ -1.47
CBF1YJR060W MRC1P25588 1096 aa5.88□□□□□ -1.47
CBF1YJR060W YUR1P26725 428 aa5.88□□□□□ -1.47
CBF1YJR060W STT3P39007 718 aaKnown RBP5.88□□□□□ -1.47
CBF1YJR060W GAA1P39012 614 aa5.88□□□□□ -1.47
CBF1YJR060W DSS1P39112 969 aa5.88□□□□□ -1.47
CBF1YJR060W SIP5P40210 489 aaKnown RBP5.88□□□□□ -1.47
CBF1YJR060W YFL054CP43549 646 aa5.88□□□□□ -1.47
CBF1YJR060W PMT3P47190 753 aa5.88□□□□□ -1.47
CBF1YJR060W YGR153WP48238 217 aa5.88□□□□□ -1.47
CBF1YJR060W YGR237CP50089 785 aa5.88□□□□□ -1.47
CBF1YJR060W MAL11P53048 616 aa5.88□□□□□ -1.47
CBF1YJR060W ORC3P54790 616 aa5.88□□□□□ -1.47
CBF1YJR060W AIM33Q04516 312 aa5.88□□□□□ -1.47
CBF1YJR060W YMR321CQ04898 105 aa5.88□□□□□ -1.47
CBF1YJR060W SUT2Q12286 268 aa5.88□□□□□ -1.47
CBF1YJR060W MDM20Q12387 796 aaKnown RBP5.88□□□□□ -1.47
CBF1YJR060W SPS1P08458 490 aa5.87□□□□□ -1.47
CBF1YJR060W RPL11AP0C0W9 174 aaKnown RBP5.87□□□□□ -1.47
CBF1YJR060W DBP7P36120 742 aaKnown RBP5.87□□□□□ -1.47
CBF1YJR060W KSP1P38691 1029 aaKnown RBP5.87□□□□□ -1.47
CBF1YJR060W MDR1P53258 950 aa5.87□□□□□ -1.47
CBF1YJR060W ZPR1P53303 486 aaKnown RBP5.87□□□□□ -1.47
CBF1YJR060W HST1P53685 503 aa5.87□□□□□ -1.47
CBF1YJR060W BRE5P53741 515 aaKnown RBP5.87□□□□□ -1.47
CBF1YJR060W FMP30Q02883 468 aa5.87□□□□□ -1.47
CBF1YJR060W YLH47Q06493 454 aa5.87□□□□□ -1.47
CBF1YJR060W ECM30Q06673 1274 aa5.87□□□□□ -1.47
CBF1YJR060W WHI4Q07655 649 aaKnown RBP5.87□□□□□ -1.47
CBF1YJR060W SLK19Q08581 821 aaKnown RBP5.87□□□□□ -1.47
CBF1YJR060W DCS2Q12123 353 aa5.87□□□□□ -1.47
Retrieved 100 of 5,963 RNA–protein pairs in 27.6 ms