RNA–Protein interactions for RNA: YJL047C

RTT101, Transcript of Cullin subunit of a Roc1p-dependent E3 ubiquitin ligase complex, yeastyeast

Gene RTT101, Length 2,529 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RTT101YJL047C DUO1P53168 247 aaKnown RBP2.21□□□□□ -2.06
RTT101YJL047C PIL1P53252 339 aaKnown RBP2.21□□□□□ -2.06
RTT101YJL047C RMT2Q03305 412 aa2.21□□□□□ -2.06
RTT101YJL047C SWA2Q06677 668 aa2.21□□□□□ -2.06
RTT101YJL047C CSR1Q06705 408 aaKnown RBP2.21□□□□□ -2.06
RTT101YJL047C YIG1Q08956 461 aa2.21□□□□□ -2.06
RTT101YJL047C FRE6Q12473 712 aa2.21□□□□□ -2.06
RTT101YJL047C YOL159C-AQ3E769 90 aa2.21□□□□□ -2.06
RTT101YJL047C RPC40P07703 335 aaKnown RBP2.21□□□□□ -2.06
RTT101YJL047C CDC4P07834 779 aa2.21□□□□□ -2.06
RTT101YJL047C SUI3P09064 285 aaKnown RBP2.21□□□□□ -2.06
RTT101YJL047C VMA2P16140 517 aaKnown RBP2.21□□□□□ -2.06
RTT101YJL047C BET2P20133 325 aa2.21□□□□□ -2.06
RTT101YJL047C KIP1P28742 1111 aa2.21□□□□□ -2.06
RTT101YJL047C NAM7P30771 971 aaKnown RBP2.21□□□□□ -2.06
RTT101YJL047C PPQ1P32945 549 aa2.21□□□□□ -2.06
RTT101YJL047C CNS1P33313 385 aa2.21□□□□□ -2.06
RTT101YJL047C FTH1P38310 465 aa2.21□□□□□ -2.06
RTT101YJL047C PCL7P40186 285 aa2.21□□□□□ -2.06
RTT101YJL047C MAD2P40958 196 aa2.21□□□□□ -2.06
RTT101YJL047C MRX6P48564 524 aa2.21□□□□□ -2.06
RTT101YJL047C NIT3P49954 291 aa2.21□□□□□ -2.06
RTT101YJL047C PSP2P50109 593 aaKnown RBP2.21□□□□□ -2.06
RTT101YJL047C YKE2P52553 114 aa2.21□□□□□ -2.06
RTT101YJL047C YNR061CP53747 219 aa2.21□□□□□ -2.06
RTT101YJL047C VPS75P53853 264 aa2.21□□□□□ -2.06
RTT101YJL047C ELA1P53861 379 aaPredicted RBP2.21□□□□□ -2.06
RTT101YJL047C SFB2P53953 876 aa2.21□□□□□ -2.06
RTT101YJL047C LEE1Q02799 301 aaKnown RBP2.21□□□□□ -2.06
RTT101YJL047C PEX25Q02969 394 aa2.21□□□□□ -2.06
RTT101YJL047C RNH1Q04740 348 aa2.21□□□□□ -2.06
RTT101YJL047C ARP9Q05123 467 aa2.21□□□□□ -2.06
RTT101YJL047C RPN7Q06103 429 aaKnown RBP2.21□□□□□ -2.06
RTT101YJL047C MDM38Q08179 573 aa2.21□□□□□ -2.06
RTT101YJL047C ISA2Q12425 185 aa2.21□□□□□ -2.06
RTT101YJL047C RPL19AP0CX82 189 aaKnown RBP2.2□□□□□ -2.06
RTT101YJL047C RPL19BP0CX83 189 aaPredicted RBP2.2□□□□□ -2.06
RTT101YJL047C POL3P15436 1097 aa2.2□□□□□ -2.06
RTT101YJL047C YCK2P23292 546 aaKnown RBP2.2□□□□□ -2.06
RTT101YJL047C SED4P25365 1065 aa2.2□□□□□ -2.06
RTT101YJL047C DLD1P32891 587 aa2.2□□□□□ -2.06
RTT101YJL047C SDS22P36047 338 aa2.2□□□□□ -2.06
RTT101YJL047C GND1P38720 489 aaKnown RBP2.2□□□□□ -2.06
RTT101YJL047C GIC1P38785 314 aa2.2□□□□□ -2.06
RTT101YJL047C RTT105P40063 208 aa2.2□□□□□ -2.06
RTT101YJL047C UBP7P40453 1071 aa2.2□□□□□ -2.06
RTT101YJL047C YJR039WP47107 1121 aa2.2□□□□□ -2.06
RTT101YJL047C GYP7P48365 746 aa2.2□□□□□ -2.06
RTT101YJL047C PSP1P50896 841 aaKnown RBP2.2□□□□□ -2.06
RTT101YJL047C SEC5P89102 971 aa2.2□□□□□ -2.06
RTT101YJL047C YML119WQ03208 357 aa2.2□□□□□ -2.06
RTT101YJL047C RAD33Q04231 177 aa2.2□□□□□ -2.06
RTT101YJL047C CRR1Q05790 422 aa2.2□□□□□ -2.06
RTT101YJL047C SOG2Q08817 791 aa2.2□□□□□ -2.06
RTT101YJL047C DIN7Q12086 430 aa2.2□□□□□ -2.06
RTT101YJL047C GET3Q12154 354 aaKnown RBP2.2□□□□□ -2.06
RTT101YJL047C GCN4P03069 281 aa2.2□□□□□ -2.06
RTT101YJL047C VAS1P07806 1104 aaKnown RBP2.2□□□□□ -2.06
RTT101YJL047C YEL076C-AP0CX16 216 aa2.2□□□□□ -2.06
RTT101YJL047C YLR464WP0CX17 216 aa2.2□□□□□ -2.06
RTT101YJL047C ACO1P19414 778 aaKnown RBP RIP-Chip data2.2□□□□□ -2.06not detected
RTT101YJL047C NFS1P25374 497 aa2.2□□□□□ -2.06
RTT101YJL047C ADK2P26364 225 aa2.2□□□□□ -2.06
RTT101YJL047C SWC3P31376 625 aa2.2□□□□□ -2.06
RTT101YJL047C IME2P32581 645 aa2.2□□□□□ -2.06
RTT101YJL047C GCS1P35197 352 aa2.2□□□□□ -2.06
RTT101YJL047C RTS1P38903 757 aa2.2□□□□□ -2.06
RTT101YJL047C PSD1P39006 500 aa2.2□□□□□ -2.06
RTT101YJL047C YAR028WP39548 234 aa2.2□□□□□ -2.06
RTT101YJL047C YEL076CP39971 216 aa2.2□□□□□ -2.06
RTT101YJL047C YEL025CP39991 1188 aa2.2□□□□□ -2.06
RTT101YJL047C YER158CP40095 573 aa2.2□□□□□ -2.06
RTT101YJL047C NEO1P40527 1151 aa2.2□□□□□ -2.06
RTT101YJL047C GCD10P41814 478 aa2.2□□□□□ -2.06
RTT101YJL047C AAD14P42884 376 aa2.2□□□□□ -2.06
RTT101YJL047C SIP4P46954 829 aa2.2□□□□□ -2.06
RTT101YJL047C NOP9P47077 666 aaKnown RBP2.2□□□□□ -2.06
RTT101YJL047C DSD1P53095 428 aa2.2□□□□□ -2.06
RTT101YJL047C BRE5P53741 515 aaKnown RBP2.2□□□□□ -2.06
RTT101YJL047C NOP15P53927 220 aaPredicted RBP2.2□□□□□ -2.06
RTT101YJL047C RPT6Q01939 405 aaKnown RBP2.2□□□□□ -2.06
RTT101YJL047C YSA1Q01976 231 aa2.2□□□□□ -2.06
RTT101YJL047C YPL107WQ02873 248 aa2.2□□□□□ -2.06
RTT101YJL047C NGL3Q03210 505 aa2.2□□□□□ -2.06
RTT101YJL047C GYL1Q04322 720 aa2.2□□□□□ -2.06
RTT101YJL047C YLR407WQ06070 228 aa2.2□□□□□ -2.06
RTT101YJL047C RSC2Q06488 889 aa2.2□□□□□ -2.06
RTT101YJL047C APL5Q08951 932 aaKnown RBP2.2□□□□□ -2.06
RTT101YJL047C ALG6Q12001 544 aaKnown RBP2.2□□□□□ -2.06
RTT101YJL047C PDH1Q12428 516 aaKnown RBP2.2□□□□□ -2.06
RTT101YJL047C NSI1Q12457 570 aa2.2□□□□□ -2.06
RTT101YJL047C YMR084WA2P2R3 262 aa2.19□□□□□ -2.06
RTT101YJL047C ADE3P07245 946 aaKnown RBP2.19□□□□□ -2.06
RTT101YJL047C SUI2P20459 304 aaKnown RBP2.19□□□□□ -2.06
RTT101YJL047C SIR1P21691 654 aa2.19□□□□□ -2.06
RTT101YJL047C APN1P22936 367 aa2.19□□□□□ -2.06
RTT101YJL047C STE50P25344 346 aa2.19□□□□□ -2.06
RTT101YJL047C PUP2P32379 260 aa2.19□□□□□ -2.06
RTT101YJL047C MAC1P35192 417 aa2.19□□□□□ -2.06
RTT101YJL047C CTF13P35203 478 aa2.19□□□□□ -2.06
Retrieved 100 of 5,963 RNA–protein pairs in 14.3 ms