RNA–Protein interactions for RNA: YGL173C

XRN1, Transcript of Evolutionarily-conserved 5'-3' exonuclease, yeastyeast

Gene XRN1, Length 4,587 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
XRN1YGL173C VMA13P41807 478 aaKnown RBP3.47□□□□□ -1.85
XRN1YGL173C RNR4P49723 345 aaKnown RBP3.47□□□□□ -1.85
XRN1YGL173C HAS1Q03532 505 aaKnown RBP3.47□□□□□ -1.85
XRN1YGL173C YDR514CQ04408 483 aa3.47□□□□□ -1.85
XRN1YGL173C RQC1Q05468 723 aaKnown RBP3.47□□□□□ -1.85
XRN1YGL173C DCS2Q12123 353 aa3.47□□□□□ -1.85
XRN1YGL173C RPN5Q12250 445 aaKnown RBP3.47□□□□□ -1.85
XRN1YGL173C YOL114CQ12322 202 aa3.47□□□□□ -1.85
XRN1YGL173C TY1A-DR3Q12441 440 aa3.47□□□□□ -1.85
XRN1YGL173C SES1P07284 462 aaKnown RBP3.47□□□□□ -1.85
XRN1YGL173C TY1A-LR4P0C2I8 440 aaKnown RBP3.47□□□□□ -1.85
XRN1YGL173C TY1A-DR6P0CX70 440 aa3.47□□□□□ -1.85
XRN1YGL173C TY1A-ER1P0CX71 440 aa3.47□□□□□ -1.85
XRN1YGL173C TY1A-LR2P0CX72 440 aa3.47□□□□□ -1.85
XRN1YGL173C TY1A-PLP0CX73 440 aa3.47□□□□□ -1.85
XRN1YGL173C TY1A-JR1P0CX74 440 aa3.47□□□□□ -1.85
XRN1YGL173C TY1A-LR3P0CX75 440 aa3.47□□□□□ -1.85
XRN1YGL173C TY1A-ML2P0CX76 440 aa3.47□□□□□ -1.85
XRN1YGL173C PMS1P14242 873 aa3.47□□□□□ -1.85
XRN1YGL173C GEX2P36173 615 aa3.47□□□□□ -1.85
XRN1YGL173C AHP1P38013 176 aaKnown RBP3.47□□□□□ -1.85
XRN1YGL173C YER010CP40011 234 aa3.47□□□□□ -1.85
XRN1YGL173C BFA1P47113 574 aa3.47□□□□□ -1.85
XRN1YGL173C SFB2P53953 876 aa3.47□□□□□ -1.85
XRN1YGL173C TY1A-GR1Q12085 440 aa3.47□□□□□ -1.85
XRN1YGL173C TY1A-PR3Q6Q5H1 440 aaKnown RBP3.47□□□□□ -1.85
XRN1YGL173C TY1A-OLQ92392 440 aaKnown RBP3.47□□□□□ -1.85
XRN1YGL173C SUP35P05453 685 aaKnown RBP3.47□□□□□ -1.85
XRN1YGL173C RPB2P08518 1224 aaKnown RBP3.47□□□□□ -1.85
XRN1YGL173C TFA2P36145 328 aa3.47□□□□□ -1.85
XRN1YGL173C TOK1P40310 691 aa3.47□□□□□ -1.85
XRN1YGL173C VID22Q05934 901 aa3.47□□□□□ -1.85
XRN1YGL173C RSA3Q05942 220 aaKnown RBP3.47□□□□□ -1.85
XRN1YGL173C PIB1Q06651 286 aa3.47□□□□□ -1.85
XRN1YGL173C AAD4Q07747 329 aa3.47□□□□□ -1.85
XRN1YGL173C GCN4P03069 281 aa3.46□□□□□ -1.85
XRN1YGL173C PRI2P20457 528 aa3.46□□□□□ -1.85
XRN1YGL173C CHL1P22516 861 aaPredicted RBP3.46□□□□□ -1.85
XRN1YGL173C AAD3P25612 363 aa3.46□□□□□ -1.85
XRN1YGL173C VMA8P32610 256 aaKnown RBP3.46□□□□□ -1.85
XRN1YGL173C TFC4P33339 1025 aa3.46□□□□□ -1.85
XRN1YGL173C LAM1P38851 1228 aa3.46□□□□□ -1.85
XRN1YGL173C ARF3P40994 183 aaRIP-Chip data3.46□□□□□ -1.85not detected
XRN1YGL173C ASK10P48361 1146 aa3.46□□□□□ -1.85
XRN1YGL173C GTR1Q00582 310 aa3.46□□□□□ -1.85
XRN1YGL173C CSR1Q06705 408 aaKnown RBP3.46□□□□□ -1.85
XRN1YGL173C INH1P01097 85 aa3.46□□□□□ -1.86
XRN1YGL173C DFR1P07807 211 aaKnown RBP RIP-Chip data3.46□□□□□ -1.86not detected
XRN1YGL173C NAB2P32505 525 aaKnown RBP RIP-Chip data3.46□□□□□ -1.86not detected
XRN1YGL173C KES1P35844 434 aaKnown RBP3.46□□□□□ -1.86
XRN1YGL173C YBL028CP38202 106 aa3.46□□□□□ -1.86
XRN1YGL173C YHR131CP38835 850 aa3.46□□□□□ -1.86
XRN1YGL173C RTS1P38903 757 aa3.46□□□□□ -1.86
XRN1YGL173C SAP1P39955 897 aaKnown RBP3.46□□□□□ -1.86
XRN1YGL173C YNL058CP53947 316 aa3.46□□□□□ -1.86
XRN1YGL173C HOS3Q02959 697 aaKnown RBP3.46□□□□□ -1.86
XRN1YGL173C CDC16P09798 840 aa3.46□□□□□ -1.86
XRN1YGL173C PRP22P24384 1145 aaKnown RBP3.46□□□□□ -1.86
XRN1YGL173C TGL1P34163 548 aa3.46□□□□□ -1.86
XRN1YGL173C DHR2P36009 735 aaPredicted RBP3.46□□□□□ -1.86
XRN1YGL173C CDS1P38221 457 aa3.46□□□□□ -1.86
XRN1YGL173C YJL206CP39529 758 aa3.46□□□□□ -1.86
XRN1YGL173C NDE1P40215 560 aa3.46□□□□□ -1.86
XRN1YGL173C MAD2P40958 196 aa3.46□□□□□ -1.86
XRN1YGL173C YGR250CP53316 781 aaKnown RBP3.46□□□□□ -1.86
XRN1YGL173C VPS30Q02948 557 aa3.46□□□□□ -1.86
XRN1YGL173C FIN1Q03898 291 aa3.46□□□□□ -1.86
XRN1YGL173C YDR338CQ05497 695 aa3.46□□□□□ -1.86
XRN1YGL173C YOR059CQ08448 450 aaKnown RBP3.46□□□□□ -1.86
XRN1YGL173C MET7Q08645 548 aa3.46□□□□□ -1.86
XRN1YGL173C CAF20P12962 161 aaKnown RBP3.46□□□□□ -1.86
XRN1YGL173C CDC26P14724 124 aa3.46□□□□□ -1.86
XRN1YGL173C CTF8P38877 133 aa3.46□□□□□ -1.86
XRN1YGL173C MPT5P39016 859 aaKnown RBP RIP-Chip data3.46□□□□□ -1.86not detected
XRN1YGL173C SAW1P39735 261 aa3.46□□□□□ -1.86
XRN1YGL173C URM1P40554 99 aaPredicted RBP3.46□□□□□ -1.86
XRN1YGL173C PCL10P53124 433 aa3.46□□□□□ -1.86
XRN1YGL173C HOT1Q03213 719 aa3.46□□□□□ -1.86
XRN1YGL173C DFG5Q05031 458 aa3.46□□□□□ -1.86
XRN1YGL173C PUF3Q07807 879 aaKnown RBP RIP-Chip data3.46□□□□□ -1.86not detected
XRN1YGL173C GPR1Q12361 961 aa3.46□□□□□ -1.86
XRN1YGL173C ATG11Q12527 1178 aa3.46□□□□□ -1.86
XRN1YGL173C RTC1Q08281 1341 aa3.45□□□□□ -1.86
XRN1YGL173C MSS116P15424 664 aaKnown RBP3.45□□□□□ -1.86
XRN1YGL173C MRPL36P36531 177 aa3.45□□□□□ -1.86
XRN1YGL173C ALG3P38179 458 aa3.45□□□□□ -1.86
XRN1YGL173C YBR225WP38321 900 aa3.45□□□□□ -1.86
XRN1YGL173C SMC2P38989 1170 aaKnown RBP3.45□□□□□ -1.86
XRN1YGL173C UBP7P40453 1071 aa3.45□□□□□ -1.86
XRN1YGL173C AIM21P40563 679 aa3.45□□□□□ -1.86
XRN1YGL173C PPN1Q04119 674 aa3.45□□□□□ -1.86
XRN1YGL173C TGL5Q12043 749 aa3.45□□□□□ -1.86
XRN1YGL173C RRP36Q12481 300 aaPredicted RBP3.45□□□□□ -1.86
XRN1YGL173C TOP3P13099 656 aa3.45□□□□□ -1.86
XRN1YGL173C ROX1P25042 368 aa3.45□□□□□ -1.86
XRN1YGL173C RRP43P25359 394 aaPredicted RBP3.45□□□□□ -1.86
XRN1YGL173C YEL043WP32618 956 aa3.45□□□□□ -1.86
XRN1YGL173C GIC1P38785 314 aa3.45□□□□□ -1.86
XRN1YGL173C RPN10P38886 268 aaKnown RBP3.45□□□□□ -1.86
XRN1YGL173C SWD1P39706 426 aa3.45□□□□□ -1.86
Retrieved 100 of 5,963 RNA–protein pairs in 52.6 ms