RNA–Protein interactions for RNA: YER094C

PUP3, Transcript of Beta 3 subunit of the 20S proteasome, yeastyeast

Gene PUP3, Length 618 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PUP3YER094C POL31P46957 487 aa8.22□□□□□ -1.09
PUP3YER094C ASG7P46993 209 aa8.22□□□□□ -1.09
PUP3YER094C INP52P50942 1183 aa8.22□□□□□ -1.09
PUP3YER094C RIM8P53179 542 aa8.22□□□□□ -1.09
PUP3YER094C SXM1Q04175 944 aaKnown RBP8.22□□□□□ -1.09
PUP3YER094C AIM39Q08223 395 aa8.22□□□□□ -1.09
PUP3YER094C APL5Q08951 932 aaKnown RBP8.22□□□□□ -1.09
PUP3YER094C TAF10Q12030 206 aa8.22□□□□□ -1.09
PUP3YER094C VPS54Q12071 889 aa8.22□□□□□ -1.09
PUP3YER094C RMP1Q12530 201 aa8.22□□□□□ -1.09
PUP3YER094C CDC8P00572 216 aa8.21□□□□□ -1.1
PUP3YER094C TPK1P06244 397 aa8.21□□□□□ -1.1
PUP3YER094C GCG1P32656 232 aaKnown RBP8.21□□□□□ -1.1
PUP3YER094C UBC6P33296 250 aaPredicted RBP8.21□□□□□ -1.1
PUP3YER094C OLA1P38219 394 aaKnown RBP8.21□□□□□ -1.1
PUP3YER094C TIF5P38431 405 aaKnown RBP8.21□□□□□ -1.1
PUP3YER094C END3P39013 349 aa8.21□□□□□ -1.1
PUP3YER094C NUR1Q12066 484 aa8.21□□□□□ -1.1
PUP3YER094C YRR1Q12172 810 aa8.21□□□□□ -1.1
PUP3YER094C PDR1P12383 1068 aa8.2□□□□□ -1.1
PUP3YER094C PUT4P15380 627 aa8.2□□□□□ -1.1
PUP3YER094C EST1P17214 699 aaPredicted RBP8.2□□□□□ -1.1
PUP3YER094C KGD2P19262 463 aaPredicted RBP8.2□□□□□ -1.1
PUP3YER094C CAP1P28495 268 aaKnown RBP8.2□□□□□ -1.1
PUP3YER094C SLA2P33338 968 aa8.2□□□□□ -1.1
PUP3YER094C SRB2P34162 210 aa8.2□□□□□ -1.1
PUP3YER094C ABZ1P37254 787 aaPredicted RBP8.2□□□□□ -1.1
PUP3YER094C YEL023CP39992 682 aa8.2□□□□□ -1.1
PUP3YER094C KHA1P40309 873 aa8.2□□□□□ -1.1
PUP3YER094C OPT1P40897 799 aa8.2□□□□□ -1.1
PUP3YER094C PFD1P46988 109 aa8.2□□□□□ -1.1
PUP3YER094C YML6P51998 286 aa8.2□□□□□ -1.1
PUP3YER094C YMR187CQ03236 431 aa8.2□□□□□ -1.1
PUP3YER094C PRM6Q04705 352 aa8.2□□□□□ -1.1
PUP3YER094C DIS3Q08162 1001 aaKnown RBP8.2□□□□□ -1.1
PUP3YER094C YLR422WQ06409 1932 aa8.19□□□□□ -1.1
PUP3YER094C AEP2P22136 580 aa8.19□□□□□ -1.1
PUP3YER094C TRX1P22217 103 aaKnown RBP8.19□□□□□ -1.1
PUP3YER094C NFU1P32860 256 aa8.19□□□□□ -1.1
PUP3YER094C TKL2P33315 681 aa8.19□□□□□ -1.1
PUP3YER094C LTV1P34078 463 aa8.19□□□□□ -1.1
PUP3YER094C HMT1P38074 348 aa8.19□□□□□ -1.1
PUP3YER094C SWC5P38326 303 aa8.19□□□□□ -1.1
PUP3YER094C PCA1P38360 1216 aa8.19□□□□□ -1.1
PUP3YER094C YNL247WP53852 767 aaKnown RBP8.19□□□□□ -1.1
PUP3YER094C UTP6Q02354 440 aaKnown RBP8.19□□□□□ -1.1
PUP3YER094C SPP1Q03012 353 aa8.19□□□□□ -1.1
PUP3YER094C TDA9Q04545 1251 aa8.19□□□□□ -1.1
PUP3YER094C NOP6Q07623 225 aaKnown RBP8.19□□□□□ -1.1
PUP3YER094C DDC1Q08949 612 aa8.19□□□□□ -1.1
PUP3YER094C GPM2Q12008 311 aa8.19□□□□□ -1.1
PUP3YER094C NBP2Q12163 236 aa8.19□□□□□ -1.1
PUP3YER094C RIO1Q12196 484 aaKnown RBP8.19□□□□□ -1.1
PUP3YER094C VPS5Q92331 675 aa8.19□□□□□ -1.1
PUP3YER094C TUB3P09734 445 aaKnown RBP8.18□□□□□ -1.1
PUP3YER094C SFL1P20134 766 aa8.18□□□□□ -1.1
PUP3YER094C GCD6P32501 712 aaKnown RBP8.18□□□□□ -1.1
PUP3YER094C ECM2P38241 364 aaKnown RBP8.18□□□□□ -1.1
PUP3YER094C HSL7P38274 827 aa8.18□□□□□ -1.1
PUP3YER094C JHD1P40034 492 aa8.18□□□□□ -1.1
PUP3YER094C YIL054WP40524 105 aa8.18□□□□□ -1.1
PUP3YER094C SAP185P40856 1058 aa8.18□□□□□ -1.1
PUP3YER094C MIC19P43594 170 aa8.18□□□□□ -1.1
PUP3YER094C VTC4P47075 721 aa8.18□□□□□ -1.1
PUP3YER094C YNL011CP53980 444 aa8.18□□□□□ -1.1
PUP3YER094C ELP3Q02908 557 aaKnown RBP8.18□□□□□ -1.1
PUP3YER094C MTG1Q03151 367 aaPredicted RBP8.18□□□□□ -1.1
PUP3YER094C RKM2Q03942 479 aa8.18□□□□□ -1.1
PUP3YER094C YML083CQ04526 418 aa8.18□□□□□ -1.1
PUP3YER094C TAF9Q05027 157 aa8.18□□□□□ -1.1
PUP3YER094C THI20Q08224 551 aa8.18□□□□□ -1.1
PUP3YER094C PRC1P00729 532 aa8.17□□□□□ -1.1
PUP3YER094C VPH1P32563 840 aaKnown RBP8.17□□□□□ -1.1
PUP3YER094C RGD1P38339 666 aa8.17□□□□□ -1.1
PUP3YER094C MSG5P38590 489 aa8.17□□□□□ -1.1
PUP3YER094C MMS21P38632 267 aa8.17□□□□□ -1.1
PUP3YER094C RAD55P38953 406 aa8.17□□□□□ -1.1
PUP3YER094C LYS9P38999 446 aa8.17□□□□□ -1.1
PUP3YER094C AVT2P39981 480 aa8.17□□□□□ -1.1
PUP3YER094C YMR134WP40207 237 aa8.17□□□□□ -1.1
PUP3YER094C TGL3P40308 642 aa8.17□□□□□ -1.1
PUP3YER094C RSC8P43609 557 aaKnown RBP8.17□□□□□ -1.1
PUP3YER094C NUT1P53114 1132 aa8.17□□□□□ -1.1
PUP3YER094C YNL040WP53960 456 aaPredicted RBP8.17□□□□□ -1.1
PUP3YER094C SLG1P54867 378 aa8.17□□□□□ -1.1
PUP3YER094C KAP95Q06142 861 aaKnown RBP8.17□□□□□ -1.1
PUP3YER094C FMP25Q08023 583 aa8.17□□□□□ -1.1
PUP3YER094C RCL1Q08096 367 aaPredicted RBP8.17□□□□□ -1.1
PUP3YER094C APC5Q08683 685 aa8.17□□□□□ -1.1
PUP3YER094C HRT3Q12347 344 aa8.17□□□□□ -1.1
PUP3YER094C HIP1P06775 603 aa8.16□□□□□ -1.1
PUP3YER094C ATP1P07251 545 aaKnown RBP8.16□□□□□ -1.1
PUP3YER094C PRP9P19736 530 aaKnown RBP8.16□□□□□ -1.1
PUP3YER094C GCS1P35197 352 aa8.16□□□□□ -1.1
PUP3YER094C PBP2P38151 413 aaKnown RBP RIP-Chip data8.16□□□□□ -1.1not detected
PUP3YER094C VHC1P38329 1120 aa8.16□□□□□ -1.1
PUP3YER094C MSC7P38694 644 aa8.16□□□□□ -1.1
PUP3YER094C YNL320WP42840 284 aa8.16□□□□□ -1.1
PUP3YER094C TAF1P46677 1066 aa8.16□□□□□ -1.1
PUP3YER094C GUF1P46943 645 aa8.16□□□□□ -1.1
Retrieved 100 of 5,963 RNA–protein pairs in 11.6 ms