RNA–Protein interactions for RNA: YDR422C

SIP1, Transcript of Alternate beta-subunit of the Snf1p kinase complex, yeast

Gene SIP1, Length 2,448 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SIP1	YDR422C	YJL068C	P40363	299 aa		4.4	□□□□□ -1.71
SIP1	YDR422C	RLP7	P40693	322 aa	Known RBP	4.4	□□□□□ -1.71
SIP1	YDR422C	NOP9	P47077	666 aa	Known RBP	4.4	□□□□□ -1.71
SIP1	YDR422C	CCM1	P48237	864 aa	Predicted RBP	4.4	□□□□□ -1.71
SIP1	YDR422C	ZIP2	P53061	704 aa		4.4	□□□□□ -1.71
SIP1	YDR422C	MEC3	Q02574	474 aa		4.4	□□□□□ -1.71
SIP1	YDR422C	SRT1	Q03175	343 aa		4.4	□□□□□ -1.71
SIP1	YDR422C	HEL2	Q05580	639 aa	Known RBP	4.4	□□□□□ -1.71
SIP1	YDR422C	ADY3	Q07732	790 aa		4.4	□□□□□ -1.71
SIP1	YDR422C	LEU2	P04173	364 aa	Predicted RBP	4.39	□□□□□ -1.71
SIP1	YDR422C	ADE3	P07245	946 aa	Known RBP	4.39	□□□□□ -1.71
SIP1	YDR422C	PFK2	P16862	959 aa	Known RBP RIP-Chip data	4.39	□□□□□ -1.71	not detected
SIP1	YDR422C	ACE2	P21192	770 aa		4.39	□□□□□ -1.71
SIP1	YDR422C	SIR1	P21691	654 aa		4.39	□□□□□ -1.71
SIP1	YDR422C	ADK2	P26364	225 aa		4.39	□□□□□ -1.71
SIP1	YDR422C	PRO1	P32264	428 aa		4.39	□□□□□ -1.71
SIP1	YDR422C	NGG1	P32494	702 aa		4.39	□□□□□ -1.71
SIP1	YDR422C	CAB3	P36076	571 aa		4.39	□□□□□ -1.71
SIP1	YDR422C	AKL1	P38080	1108 aa	Known RBP	4.39	□□□□□ -1.71
SIP1	YDR422C	SRP68	P38687	599 aa	Known RBP	4.39	□□□□□ -1.71
SIP1	YDR422C	PRK1	P40494	810 aa		4.39	□□□□□ -1.71
SIP1	YDR422C	DSD1	P53095	428 aa		4.39	□□□□□ -1.71
SIP1	YDR422C	PTA1	Q01329	785 aa	Predicted RBP	4.39	□□□□□ -1.71
SIP1	YDR422C	YSA1	Q01976	231 aa		4.39	□□□□□ -1.71
SIP1	YDR422C	ASM4	Q05166	528 aa		4.39	□□□□□ -1.71
SIP1	YDR422C	ISA1	Q07821	250 aa	Predicted RBP	4.39	□□□□□ -1.71
SIP1	YDR422C	RPP2B	P02400	110 aa	Known RBP	4.38	□□□□□ -1.71
SIP1	YDR422C	YEL076C-A	P0CX16	216 aa		4.38	□□□□□ -1.71
SIP1	YDR422C	YLR464W	P0CX17	216 aa		4.38	□□□□□ -1.71
SIP1	YDR422C	BET2	P20133	325 aa		4.38	□□□□□ -1.71
SIP1	YDR422C	ARL1	P38116	183 aa	Known RBP	4.38	□□□□□ -1.71
SIP1	YDR422C	SRP72	P38688	640 aa	Known RBP	4.38	□□□□□ -1.71
SIP1	YDR422C	GND1	P38720	489 aa	Known RBP	4.38	□□□□□ -1.71
SIP1	YDR422C	POP2	P39008	433 aa		4.38	□□□□□ -1.71
SIP1	YDR422C	YEL076C	P39971	216 aa		4.38	□□□□□ -1.71
SIP1	YDR422C	CIR1	P42940	261 aa		4.38	□□□□□ -1.71
SIP1	YDR422C	FET5	P43561	622 aa		4.38	□□□□□ -1.71
SIP1	YDR422C	POL31	P46957	487 aa		4.38	□□□□□ -1.71
SIP1	YDR422C	NAM8	Q00539	523 aa	Known RBP	4.38	□□□□□ -1.71
SIP1	YDR422C	FDC1	Q03034	503 aa		4.38	□□□□□ -1.71
SIP1	YDR422C	RSA3	Q05942	220 aa	Known RBP	4.38	□□□□□ -1.71
SIP1	YDR422C	NFI1	Q12216	726 aa		4.38	□□□□□ -1.71
SIP1	YDR422C	KCS1	Q12494	1050 aa		4.38	□□□□□ -1.71
SIP1	YDR422C	ERS1	P17261	260 aa		4.38	□□□□□ -1.71
SIP1	YDR422C	SED4	P25365	1065 aa		4.38	□□□□□ -1.71
SIP1	YDR422C	PPQ1	P32945	549 aa		4.38	□□□□□ -1.71
SIP1	YDR422C	YKR078W	P36158	585 aa	Known RBP	4.38	□□□□□ -1.71
SIP1	YDR422C	FKH1	P40466	484 aa		4.38	□□□□□ -1.71
SIP1	YDR422C	BNA2	P47125	453 aa		4.38	□□□□□ -1.71
SIP1	YDR422C	DUO1	P53168	247 aa	Known RBP	4.38	□□□□□ -1.71
SIP1	YDR422C	YGR045C	P53229	120 aa		4.38	□□□□□ -1.71
SIP1	YDR422C	GCR2	Q01722	534 aa		4.38	□□□□□ -1.71
SIP1	YDR422C	YDR514C	Q04408	483 aa		4.38	□□□□□ -1.71
SIP1	YDR422C	ACM1	Q08981	209 aa		4.38	□□□□□ -1.71
SIP1	YDR422C	PUS1	Q12211	544 aa	Known RBP	4.38	□□□□□ -1.71
SIP1	YDR422C	CEX1	Q12453	761 aa		4.38	□□□□□ -1.71
SIP1	YDR422C	SPT7	P35177	1332 aa		4.38	□□□□□ -1.71
SIP1	YDR422C	TUF1	P02992	437 aa	Known RBP	4.37	□□□□□ -1.71
SIP1	YDR422C	SRO9	P25567	434 aa	Known RBP	4.37	□□□□□ -1.71
SIP1	YDR422C	CAP1	P28495	268 aa	Known RBP	4.37	□□□□□ -1.71
SIP1	YDR422C	GPI10	P30777	616 aa		4.37	□□□□□ -1.71
SIP1	YDR422C	FUN30	P31380	1131 aa		4.37	□□□□□ -1.71
SIP1	YDR422C	UBP13	P38187	747 aa		4.37	□□□□□ -1.71
SIP1	YDR422C	ALY2	P47029	1046 aa		4.37	□□□□□ -1.71
SIP1	YDR422C	YDL183C	P48569	320 aa		4.37	□□□□□ -1.71
SIP1	YDR422C	GUP1	P53154	560 aa		4.37	□□□□□ -1.71
SIP1	YDR422C	ACS1	Q01574	713 aa		4.37	□□□□□ -1.71
SIP1	YDR422C	EAR1	Q03212	550 aa		4.37	□□□□□ -1.71
SIP1	YDR422C	HED1	Q03937	162 aa		4.37	□□□□□ -1.71
SIP1	YDR422C	VAS1	P07806	1104 aa	Known RBP	4.37	□□□□□ -1.71
SIP1	YDR422C	PMS1	P14242	873 aa		4.37	□□□□□ -1.71
SIP1	YDR422C	POL3	P15436	1097 aa		4.37	□□□□□ -1.71
SIP1	YDR422C	YKL100C	P34248	587 aa		4.37	□□□□□ -1.71
SIP1	YDR422C	AHP1	P38013	176 aa	Known RBP	4.37	□□□□□ -1.71
SIP1	YDR422C	CSR1	Q06705	408 aa	Known RBP	4.37	□□□□□ -1.71
SIP1	YDR422C	TGL5	Q12043	749 aa		4.37	□□□□□ -1.71
SIP1	YDR422C	PAR32	Q12515	295 aa	Known RBP	4.37	□□□□□ -1.71
SIP1	YDR422C	NUC1	P08466	329 aa		4.36	□□□□□ -1.71
SIP1	YDR422C	UGA3	P26370	528 aa		4.36	□□□□□ -1.71
SIP1	YDR422C	YAR028W	P39548	234 aa		4.36	□□□□□ -1.71
SIP1	YDR422C	AIR1	P40507	360 aa	Known RBP	4.36	□□□□□ -1.71
SIP1	YDR422C	YFL052W	P43551	465 aa		4.36	□□□□□ -1.71
SIP1	YDR422C	MSB3	P48566	633 aa	Predicted RBP	4.36	□□□□□ -1.71
SIP1	YDR422C	YPL107W	Q02873	248 aa		4.36	□□□□□ -1.71
SIP1	YDR422C	YDR341C	Q05506	607 aa	Known RBP	4.36	□□□□□ -1.71
SIP1	YDR422C	IWR1	Q07532	353 aa	Predicted RBP	4.36	□□□□□ -1.71
SIP1	YDR422C	YPL272C	Q08984	517 aa		4.36	□□□□□ -1.71
SIP1	YDR422C	CLB4	P24871	460 aa		4.36	□□□□□ -1.71
SIP1	YDR422C	RPD3	P32561	433 aa		4.36	□□□□□ -1.71
SIP1	YDR422C	GCS1	P35197	352 aa		4.36	□□□□□ -1.71
SIP1	YDR422C	CDS1	P38221	457 aa		4.36	□□□□□ -1.71
SIP1	YDR422C	GCV1	P48015	400 aa		4.36	□□□□□ -1.71
SIP1	YDR422C	NCS2	P53923	493 aa	Predicted RBP	4.36	□□□□□ -1.71
SIP1	YDR422C	RPN7	Q06103	429 aa	Known RBP	4.36	□□□□□ -1.71
SIP1	YDR422C	YPL260W	Q08977	551 aa		4.36	□□□□□ -1.71
SIP1	YDR422C	ICL2	Q12031	575 aa		4.36	□□□□□ -1.71
SIP1	YDR422C	YLL058W	Q12198	575 aa		4.36	□□□□□ -1.71
SIP1	YDR422C	PHO5	P00635	467 aa		4.35	□□□□□ -1.71
SIP1	YDR422C	RPB2	P08518	1224 aa	Known RBP	4.35	□□□□□ -1.71
SIP1	YDR422C	FBP1	P09201	348 aa		4.35	□□□□□ -1.71

Retrieved 100 of 5,963 RNA–protein pairs in 20 ms