RNA–Protein interactions for RNA: YDR073W

SNF11, Transcript of Subunit of the SWI/SNF chromatin remodeling complex, yeast

Gene SNF11, Length 510 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SNF11	YDR073W	VPS5	Q92331	675 aa		6.32	□□□□□ -1.4
SNF11	YDR073W	HOM3	P10869	527 aa		6.31	□□□□□ -1.4
SNF11	YDR073W	SFA1	P32771	386 aa		6.31	□□□□□ -1.4
SNF11	YDR073W	WHI3	P34761	661 aa	Known RBP	6.31	□□□□□ -1.4
SNF11	YDR073W	YLF2	P38746	405 aa		6.31	□□□□□ -1.4
SNF11	YDR073W	YER010C	P40011	234 aa		6.31	□□□□□ -1.4
SNF11	YDR073W	TDA9	Q04545	1251 aa		6.31	□□□□□ -1.4
SNF11	YDR073W	SPN1	Q06505	410 aa	Predicted RBP	6.31	□□□□□ -1.4
SNF11	YDR073W	CDA1	Q06702	301 aa		6.31	□□□□□ -1.4
SNF11	YDR073W	IWR1	Q07532	353 aa	Predicted RBP	6.31	□□□□□ -1.4
SNF11	YDR073W	SCM3	Q12334	223 aa		6.31	□□□□□ -1.4
SNF11	YDR073W	HIF1	Q12373	385 aa		6.31	□□□□□ -1.4
SNF11	YDR073W	DBP10	Q12389	995 aa	Known RBP	6.31	□□□□□ -1.4
SNF11	YDR073W	HSH49	Q99181	213 aa	Predicted RBP	6.31	□□□□□ -1.4
SNF11	YDR073W	SEM1	O94742	89 aa		6.3	□□□□□ -1.4
SNF11	YDR073W	RPS0A	P32905	252 aa	Known RBP	6.3	□□□□□ -1.4
SNF11	YDR073W	IFA38	P38286	347 aa		6.3	□□□□□ -1.4
SNF11	YDR073W	YHR033W	P38690	423 aa		6.3	□□□□□ -1.4
SNF11	YDR073W	YHR078W	P38799	552 aa		6.3	□□□□□ -1.4
SNF11	YDR073W	ZRG8	P40021	1076 aa		6.3	□□□□□ -1.4
SNF11	YDR073W	RIC1	P40395	1056 aa		6.3	□□□□□ -1.4
SNF11	YDR073W	CIT3	P43635	486 aa		6.3	□□□□□ -1.4
SNF11	YDR073W	CTF18	P49956	741 aa		6.3	□□□□□ -1.4
SNF11	YDR073W	MNT2	P53059	558 aa		6.3	□□□□□ -1.4
SNF11	YDR073W	YBP2	P53169	641 aa		6.3	□□□□□ -1.4
SNF11	YDR073W	MRPL19	P53875	158 aa		6.3	□□□□□ -1.4
SNF11	YDR073W	RSM24	Q03976	319 aa		6.3	□□□□□ -1.4
SNF11	YDR073W	ISA1	Q07821	250 aa	Predicted RBP	6.3	□□□□□ -1.4
SNF11	YDR073W	GAS5	Q08193	484 aa		6.3	□□□□□ -1.4
SNF11	YDR073W	VHS3	Q08438	674 aa		6.3	□□□□□ -1.4
SNF11	YDR073W	TRM8	Q12009	286 aa		6.3	□□□□□ -1.4
SNF11	YDR073W	CDC16	P09798	840 aa		6.29	□□□□□ -1.4
SNF11	YDR073W	SIR1	P21691	654 aa		6.29	□□□□□ -1.4
SNF11	YDR073W	CDC60	P26637	1090 aa	Known RBP	6.29	□□□□□ -1.4
SNF11	YDR073W	VMA8	P32610	256 aa	Known RBP	6.29	□□□□□ -1.4
SNF11	YDR073W	TEF4	P36008	412 aa	Known RBP	6.29	□□□□□ -1.4
SNF11	YDR073W	NPR3	P38742	1146 aa		6.29	□□□□□ -1.4
SNF11	YDR073W	SAK1	P38990	1142 aa		6.29	□□□□□ -1.4
SNF11	YDR073W	PZF1	P39933	429 aa		6.29	□□□□□ -1.4
SNF11	YDR073W	ICP55	P40051	511 aa		6.29	□□□□□ -1.4
SNF11	YDR073W	MAD2	P40958	196 aa		6.29	□□□□□ -1.4
SNF11	YDR073W	SQS1	P53866	767 aa	Known RBP	6.29	□□□□□ -1.4
SNF11	YDR073W	MSC2	Q03455	724 aa		6.29	□□□□□ -1.4
SNF11	YDR073W	ARA2	Q04212	335 aa		6.29	□□□□□ -1.4
SNF11	YDR073W	YKU80	Q04437	629 aa		6.29	□□□□□ -1.4
SNF11	YDR073W	TRI1	Q05024	226 aa		6.29	□□□□□ -1.4
SNF11	YDR073W	RRG1	Q12167	365 aa	Predicted RBP	6.29	□□□□□ -1.4
SNF11	YDR073W	HOS1	Q12214	470 aa		6.29	□□□□□ -1.4
SNF11	YDR073W	AI1	P03875	834 aa		6.28	□□□□□ -1.4
SNF11	YDR073W	FUM1	P08417	488 aa	Known RBP	6.28	□□□□□ -1.4
SNF11	YDR073W	BET2	P20133	325 aa		6.28	□□□□□ -1.4
SNF11	YDR073W	RKM3	P38222	552 aa		6.28	□□□□□ -1.4
SNF11	YDR073W	KHA1	P40309	873 aa		6.28	□□□□□ -1.4
SNF11	YDR073W	YNR071C	P53757	342 aa		6.28	□□□□□ -1.4
SNF11	YDR073W	RCM1	P53972	490 aa		6.28	□□□□□ -1.4
SNF11	YDR073W	NSE5	Q03718	556 aa		6.28	□□□□□ -1.4
SNF11	YDR073W	STP4	Q07351	490 aa		6.28	□□□□□ -1.4
SNF11	YDR073W	SGO1	Q08490	590 aa		6.28	□□□□□ -1.4
SNF11	YDR073W	PUS1	Q12211	544 aa	Known RBP	6.28	□□□□□ -1.4
SNF11	YDR073W	PHM7	Q12252	991 aa		6.28	□□□□□ -1.4
SNF11	YDR073W	PCK1	P10963	549 aa		6.27	□□□□□ -1.41
SNF11	YDR073W	PYC1	P11154	1178 aa	Known RBP	6.27	□□□□□ -1.41
SNF11	YDR073W	MET8	P15807	274 aa		6.27	□□□□□ -1.41
SNF11	YDR073W	PET127	P32606	800 aa		6.27	□□□□□ -1.41
SNF11	YDR073W	CNS1	P33313	385 aa		6.27	□□□□□ -1.41
SNF11	YDR073W	DHR2	P36009	735 aa	Predicted RBP	6.27	□□□□□ -1.41
SNF11	YDR073W	YBR138C	P38277	524 aa		6.27	□□□□□ -1.41
SNF11	YDR073W	CTF8	P38877	133 aa		6.27	□□□□□ -1.41
SNF11	YDR073W	GPD2	P41911	440 aa	Known RBP	6.27	□□□□□ -1.41
SNF11	YDR073W	TAF4	P50105	388 aa		6.27	□□□□□ -1.41
SNF11	YDR073W	RRT6	P53117	311 aa	Predicted RBP	6.27	□□□□□ -1.41
SNF11	YDR073W	YAP1802	P53309	568 aa		6.27	□□□□□ -1.41
SNF11	YDR073W	TIM10	P87108	93 aa		6.27	□□□□□ -1.41
SNF11	YDR073W	ERO1	Q03103	563 aa		6.27	□□□□□ -1.41
SNF11	YDR073W	RCF1	Q03713	159 aa		6.27	□□□□□ -1.41
SNF11	YDR073W	SYF1	Q04048	859 aa	Predicted RBP	6.27	□□□□□ -1.41
SNF11	YDR073W	SIZ1	Q04195	904 aa		6.27	□□□□□ -1.41
SNF11	YDR073W	DIN7	Q12086	430 aa		6.27	□□□□□ -1.41
SNF11	YDR073W	FBP1	P09201	348 aa		6.26	□□□□□ -1.41
SNF11	YDR073W	ATG19	P35193	415 aa		6.26	□□□□□ -1.41
SNF11	YDR073W	AKR1	P39010	764 aa		6.26	□□□□□ -1.41
SNF11	YDR073W	CCT3	P39077	534 aa	Known RBP	6.26	□□□□□ -1.41
SNF11	YDR073W	SDP1	P40479	209 aa		6.26	□□□□□ -1.41
SNF11	YDR073W	PRM2	P40534	656 aa		6.26	□□□□□ -1.41
SNF11	YDR073W	GTS1	P40956	396 aa		6.26	□□□□□ -1.41
SNF11	YDR073W	IRC6	P43615	237 aa		6.26	□□□□□ -1.41
SNF11	YDR073W	MDR1	P53258	950 aa		6.26	□□□□□ -1.41
SNF11	YDR073W	YNR014W	P53719	212 aa		6.26	□□□□□ -1.41
SNF11	YDR073W	PPN1	Q04119	674 aa		6.26	□□□□□ -1.41
SNF11	YDR073W	TRE1	Q08919	783 aa		6.26	□□□□□ -1.41
SNF11	YDR073W	RIB2	Q12362	591 aa	Known RBP	6.26	□□□□□ -1.41
SNF11	YDR073W	ATG11	Q12527	1178 aa		6.26	□□□□□ -1.41
SNF11	YDR073W	SPE1	P08432	466 aa		6.25	□□□□□ -1.41
SNF11	YDR073W	FRS1	P15624	595 aa	Known RBP	6.25	□□□□□ -1.41
SNF11	YDR073W	RIT1	P23796	513 aa		6.25	□□□□□ -1.41
SNF11	YDR073W	SWI4	P25302	1093 aa	Known RBP	6.25	□□□□□ -1.41
SNF11	YDR073W	CWH43	P25618	953 aa		6.25	□□□□□ -1.41
SNF11	YDR073W	PTC7	P38797	343 aa		6.25	□□□□□ -1.41
SNF11	YDR073W	LYS14	P40971	790 aa		6.25	□□□□□ -1.41
SNF11	YDR073W	PXA1	P41909	870 aa		6.25	□□□□□ -1.41

Retrieved 100 of 5,963 RNA–protein pairs in 45.1 ms