RNA–Protein interactions for RNA: YBR106W

PHO88, Transcript of Probable membrane protein, yeastyeast

Gene PHO88, Length 567 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PHO88YBR106W NUR1Q12066 484 aa4.01□□□□□ -1.77
PHO88YBR106W HOS1Q12214 470 aa4.01□□□□□ -1.77
PHO88YBR106W CLF1Q12309 687 aaPredicted RBP4.01□□□□□ -1.77
PHO88YBR106W RTP1Q12751 981 aa4.01□□□□□ -1.77
PHO88YBR106W YEL076C-AP0CX16 216 aa4□□□□□ -1.77
PHO88YBR106W YLR464WP0CX17 216 aa4□□□□□ -1.77
PHO88YBR106W GLN4P13188 809 aaKnown RBP4□□□□□ -1.77
PHO88YBR106W HSC82P15108 705 aaKnown RBP4□□□□□ -1.77
PHO88YBR106W IMG2P25642 146 aaPredicted RBP4□□□□□ -1.77
PHO88YBR106W JNM1P36224 373 aa4□□□□□ -1.77
PHO88YBR106W NPR3P38742 1146 aa4□□□□□ -1.77
PHO88YBR106W ETP1P38748 585 aaKnown RBP4□□□□□ -1.77
PHO88YBR106W YEL076CP39971 216 aa4□□□□□ -1.77
PHO88YBR106W TAF4P50105 388 aa4□□□□□ -1.77
PHO88YBR106W VPS62P53285 467 aa4□□□□□ -1.77
PHO88YBR106W NRD1P53617 575 aaKnown RBP RIP-Chip data4□□□□□ -1.77not detected
PHO88YBR106W SQS1P53866 767 aaKnown RBP4□□□□□ -1.77
PHO88YBR106W MRPL22P53881 309 aa4□□□□□ -1.77
PHO88YBR106W MTD1Q02046 320 aaKnown RBP4□□□□□ -1.77
PHO88YBR106W YML131WQ03102 365 aa4□□□□□ -1.77
PHO88YBR106W NRG1Q03125 231 aa4□□□□□ -1.77
PHO88YBR106W GCN5Q03330 439 aa4□□□□□ -1.77
PHO88YBR106W BRE1Q07457 700 aaKnown RBP4□□□□□ -1.77
PHO88YBR106W CRD1Q07560 283 aa4□□□□□ -1.77
PHO88YBR106W BRE4Q07660 1125 aa4□□□□□ -1.77
PHO88YBR106W ENB1Q08299 606 aa4□□□□□ -1.77
PHO88YBR106W MCA1Q08601 432 aa4□□□□□ -1.77
PHO88YBR106W AIM41Q12032 185 aa4□□□□□ -1.77
PHO88YBR106W BPT1P14772 1559 aa4□□□□□ -1.77
PHO88YBR106W TRP3P00937 484 aa3.99□□□□□ -1.77
PHO88YBR106W ATP12P22135 325 aa3.99□□□□□ -1.77
PHO88YBR106W EMC1P25574 760 aa3.99□□□□□ -1.77
PHO88YBR106W RPT3P33298 428 aaKnown RBP3.99□□□□□ -1.77
PHO88YBR106W SER1P33330 395 aaKnown RBP3.99□□□□□ -1.77
PHO88YBR106W CTF13P35203 478 aa3.99□□□□□ -1.77
PHO88YBR106W PSY4P38193 441 aa3.99□□□□□ -1.77
PHO88YBR106W RPP1P38786 293 aa3.99□□□□□ -1.77
PHO88YBR106W TMA108P40462 946 aa3.99□□□□□ -1.77
PHO88YBR106W PEF1P53238 335 aa3.99□□□□□ -1.77
PHO88YBR106W SPO1P53541 631 aa3.99□□□□□ -1.77
PHO88YBR106W ESF2P53743 316 aaKnown RBP3.99□□□□□ -1.77
PHO88YBR106W MRPL13Q02204 264 aa3.99□□□□□ -1.77
PHO88YBR106W PLB2Q03674 706 aa3.99□□□□□ -1.77
PHO88YBR106W DUS4Q06063 367 aa3.99□□□□□ -1.77
PHO88YBR106W NEW1Q08972 1196 aaKnown RBP3.99□□□□□ -1.77
PHO88YBR106W SEC12P11655 471 aa3.98□□□□□ -1.77
PHO88YBR106W CDC26P14724 124 aa3.98□□□□□ -1.77
PHO88YBR106W SEC18P18759 758 aaKnown RBP3.98□□□□□ -1.77
PHO88YBR106W ADE2P21264 571 aaKnown RBP3.98□□□□□ -1.77
PHO88YBR106W SWC3P31376 625 aa3.98□□□□□ -1.77
PHO88YBR106W SEC21P32074 935 aaKnown RBP3.98□□□□□ -1.77
PHO88YBR106W HXT4P32467 576 aa3.98□□□□□ -1.77
PHO88YBR106W LIP5P32875 414 aa3.98□□□□□ -1.77
PHO88YBR106W SHM2P37291 469 aaKnown RBP3.98□□□□□ -1.77
PHO88YBR106W APM3P38153 483 aa3.98□□□□□ -1.77
PHO88YBR106W SCS2P40075 244 aaKnown RBP3.98□□□□□ -1.77
PHO88YBR106W SMK1P41808 388 aa3.98□□□□□ -1.77
PHO88YBR106W COX18P53239 316 aa3.98□□□□□ -1.77
PHO88YBR106W MDR1P53258 950 aa3.98□□□□□ -1.77
PHO88YBR106W ARA2Q04212 335 aa3.98□□□□□ -1.77
PHO88YBR106W HIM1Q06674 414 aa3.98□□□□□ -1.77
PHO88YBR106W WHI4Q07655 649 aaKnown RBP3.98□□□□□ -1.77
PHO88YBR106W RRI2Q12348 645 aa3.98□□□□□ -1.77
PHO88YBR106W GPR1Q12361 961 aa3.98□□□□□ -1.77
PHO88YBR106W NPC2Q12408 173 aa3.98□□□□□ -1.77
PHO88YBR106W POM34Q12445 299 aa3.98□□□□□ -1.77
PHO88YBR106W DFG16Q99234 619 aa3.98□□□□□ -1.77
PHO88YBR106W NUC1P08466 329 aa3.97□□□□□ -1.77
PHO88YBR106W PFK2P16862 959 aaKnown RBP RIP-Chip data3.97□□□□□ -1.77not detected
PHO88YBR106W PEX1P24004 1043 aa3.97□□□□□ -1.77
PHO88YBR106W MCM3P24279 971 aaKnown RBP3.97□□□□□ -1.77
PHO88YBR106W RRN3P36070 627 aa3.97□□□□□ -1.77
PHO88YBR106W YHR033WP38690 423 aa3.97□□□□□ -1.77
PHO88YBR106W UME6P39001 836 aa3.97□□□□□ -1.77
PHO88YBR106W YIR042CP40586 236 aa3.97□□□□□ -1.77
PHO88YBR106W YFR016CP43597 1233 aaKnown RBP3.97□□□□□ -1.77
PHO88YBR106W BIT61P47041 543 aa3.97□□□□□ -1.77
PHO88YBR106W CCT8P47079 568 aaKnown RBP3.97□□□□□ -1.77
PHO88YBR106W CEG1Q01159 459 aaPredicted RBP3.97□□□□□ -1.77
PHO88YBR106W TRS130Q03660 1102 aa3.97□□□□□ -1.77
PHO88YBR106W HMO1Q03973 246 aaKnown RBP3.97□□□□□ -1.77
PHO88YBR106W OMS1Q06668 471 aa3.97□□□□□ -1.77
PHO88YBR106W TSR2Q06672 205 aaKnown RBP3.97□□□□□ -1.77
PHO88YBR106W STP4Q07351 490 aa3.97□□□□□ -1.77
PHO88YBR106W TGL5Q12043 749 aa3.97□□□□□ -1.77
PHO88YBR106W SOD2P00447 233 aa3.96□□□□□ -1.78
PHO88YBR106W PHO5P00635 467 aa3.96□□□□□ -1.78
PHO88YBR106W RPS9BP05755 195 aaKnown RBP3.96□□□□□ -1.78
PHO88YBR106W MET3P08536 511 aa3.96□□□□□ -1.78
PHO88YBR106W TUB3P09734 445 aaKnown RBP3.96□□□□□ -1.78
PHO88YBR106W LAT1P12695 482 aaKnown RBP3.96□□□□□ -1.78
PHO88YBR106W CBP3P21560 335 aa3.96□□□□□ -1.78
PHO88YBR106W STE11P23561 717 aa3.96□□□□□ -1.78
PHO88YBR106W CDC20P26309 610 aa3.96□□□□□ -1.78
PHO88YBR106W CHS3P29465 1165 aa3.96□□□□□ -1.78
PHO88YBR106W SEG2P34250 1132 aa3.96□□□□□ -1.78
PHO88YBR106W EXO84P38261 753 aa3.96□□□□□ -1.78
PHO88YBR106W YHR112CP38716 378 aa3.96□□□□□ -1.78
PHO88YBR106W MSS4P38994 779 aa3.96□□□□□ -1.78
PHO88YBR106W PLB1P39105 664 aa3.96□□□□□ -1.78
Retrieved 100 of 5,963 RNA–protein pairs in 23.6 ms