RNA–Protein interactions for RNA: ENST00000546873.1

CHPT1-203, Transcript of choline phosphotransferase 1, humanhuman

TSL 3

Gene CHPT1, Length 624 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPT1-203ENST00000546873 TXNRD3Q86VQ6 643 aa10.55□□□□□ -0.72
CHPT1-203ENST00000546873 NUDT16Q96DE0 195 aaKnown RBP10.55□□□□□ -0.72
CHPT1-203ENST00000546873 AKNAQ7Z591 1439 aa10.55□□□□□ -0.72
CHPT1-203ENST00000546873 LRRC9Q6ZRR7 1453 aa10.55□□□□□ -0.72
CHPT1-203ENST00000546873 EHBP1L1Q8N3D4 1523 aa10.54□□□□□ -0.72
CHPT1-203ENST00000546873 TMEM88BA6NKF7 163 aa10.54□□□□□ -0.72
CHPT1-203ENST00000546873 PTPRTO14522 1441 aa10.54□□□□□ -0.72
CHPT1-203ENST00000546873 SSFA2P28290 1259 aa10.54□□□□□ -0.72
CHPT1-203ENST00000546873 MED1Q15648 1581 aaPredicted RBP10.54□□□□□ -0.72
CHPT1-203ENST00000546873 SHISA2Q6UWI4 295 aa10.54□□□□□ -0.72
CHPT1-203ENST00000546873 ZNF438Q7Z4V0 828 aa10.54□□□□□ -0.72
CHPT1-203ENST00000546873 IL22RA1Q8N6P7 574 aa10.54□□□□□ -0.72
CHPT1-203ENST00000546873 GTF3C2Q8WUA4 911 aaPredicted RBP10.54□□□□□ -0.72
CHPT1-203ENST00000546873 MUC3BQ9H195 1237 aa10.54□□□□□ -0.72
CHPT1-203ENST00000546873 TPSG1Q9NRR2 321 aa10.54□□□□□ -0.72
CHPT1-203ENST00000546873 DENND4BO75064 1496 aaPredicted RBP10.54□□□□□ -0.72
CHPT1-203ENST00000546873 RICTORQ6R327 1708 aa10.53□□□□□ -0.72
CHPT1-203ENST00000546873 FAM177BA6PVY3 158 aa10.53□□□□□ -0.72
CHPT1-203ENST00000546873 SMNDC1O75940 238 aaKnown RBP eCLIP10.53□□□□□ -0.72
CHPT1-203ENST00000546873 DNM1Q05193 864 aaKnown RBP10.53□□□□□ -0.72
CHPT1-203ENST00000546873 AAMPQ13685 434 aa10.53□□□□□ -0.72
CHPT1-203ENST00000546873 ELP3Q9H9T3 547 aa10.53□□□□□ -0.72
CHPT1-203ENST00000546873 SRA1Q9HD15 236 aaKnown RBP10.53□□□□□ -0.72
CHPT1-203ENST00000546873 LOC100996750A0A140TA64 210 aa10.52□□□□□ -0.73
CHPT1-203ENST00000546873 B4GALNT3Q6L9W6 998 aa10.52□□□□□ -0.73
CHPT1-203ENST00000546873 IGF2-ASQ6U949 168 aa10.52□□□□□ -0.73
CHPT1-203ENST00000546873 ATCAYQ86WG3 371 aa10.52□□□□□ -0.73
CHPT1-203ENST00000546873 NCAPG2Q86XI2 1143 aa10.52□□□□□ -0.73
CHPT1-203ENST00000546873 MAP4K3Q8IVH8 894 aa10.52□□□□□ -0.73
CHPT1-203ENST00000546873 EDEM1Q92611 657 aa10.52□□□□□ -0.73
CHPT1-203ENST00000546873 KRTAP4-6Q9BYQ5 205 aa10.52□□□□□ -0.73
CHPT1-203ENST00000546873 IQSEC2Q5JU85 1478 aa10.52□□□□□ -0.73
CHPT1-203ENST00000546873 ZFYVE16Q7Z3T8 1539 aa10.52□□□□□ -0.73
CHPT1-203ENST00000546873 RAPGEF6Q8TEU7 1601 aa10.51□□□□□ -0.73
CHPT1-203ENST00000546873 UHRF1BP1Q6BDS2 1440 aa10.51□□□□□ -0.73
CHPT1-203ENST00000546873 SUPT6HQ7KZ85 1726 aaKnown RBP10.5□□□□□ -0.73
CHPT1-203ENST00000546873 ARHGEF12Q9NZN5 1544 aa10.5□□□□□ -0.73
CHPT1-203ENST00000546873 C8orf34Q49A92 452 aa10.5□□□□□ -0.73
CHPT1-203ENST00000546873 FAM13AO94988 1023 aa10.49□□□□□ -0.73
CHPT1-203ENST00000546873 MPSTP25325 297 aa10.49□□□□□ -0.73
CHPT1-203ENST00000546873 MZF1P28698 734 aaPredicted RBP10.49□□□□□ -0.73
CHPT1-203ENST00000546873 EIF1AXP47813 144 aaKnown RBP10.49□□□□□ -0.73
CHPT1-203ENST00000546873 RSPO4Q2I0M5 234 aaPredicted RBP10.49□□□□□ -0.73
CHPT1-203ENST00000546873 CEP135Q66GS9 1140 aa10.49□□□□□ -0.73
CHPT1-203ENST00000546873 TRIM33Q9UPN9 1127 aa10.49□□□□□ -0.73
CHPT1-203ENST00000546873 PPME1Q9Y570 386 aa10.49□□□□□ -0.73
CHPT1-203ENST00000546873 MTUS2Q5JR59 1369 aa10.49□□□□□ -0.73
CHPT1-203ENST00000546873 ZMYM4Q5VZL5 1548 aa10.48□□□□□ -0.73
CHPT1-203ENST00000546873 LRRIQ1Q96JM4 1722 aa10.48□□□□□ -0.73
CHPT1-203ENST00000546873 USTQ9Y2C2 406 aa10.48□□□□□ -0.73
CHPT1-203ENST00000546873 RRBP1Q9P2E9 1410 aaKnown RBP10.48□□□□□ -0.73
CHPT1-203ENST00000546873 PDGFAP04085 211 aa10.47□□□□□ -0.73
CHPT1-203ENST00000546873 CES1P23141 567 aa10.47□□□□□ -0.73
CHPT1-203ENST00000546873 HSPA1LP34931 641 aa10.47□□□□□ -0.73
CHPT1-203ENST00000546873 SF3B2Q13435 895 aaKnown RBP10.47□□□□□ -0.73
CHPT1-203ENST00000546873 NKAPLQ5M9Q1 402 aa10.47□□□□□ -0.73
CHPT1-203ENST00000546873 FAM117BQ6P1L5 589 aa10.47□□□□□ -0.73
CHPT1-203ENST00000546873 PMEPA1Q969W9 287 aa10.47□□□□□ -0.73
CHPT1-203ENST00000546873 ZNF335Q9H4Z2 1342 aaPredicted RBP10.47□□□□□ -0.73
CHPT1-203ENST00000546873 DLL1O00548 723 aa10.46□□□□□ -0.73
CHPT1-203ENST00000546873 DEAF1O75398 565 aaPredicted RBP10.46□□□□□ -0.73
CHPT1-203ENST00000546873 KIF4AO95239 1232 aa10.46□□□□□ -0.73
CHPT1-203ENST00000546873 ABL1P00519 1130 aa10.46□□□□□ -0.73
CHPT1-203ENST00000546873 CDC27P30260 824 aa10.46□□□□□ -0.73
CHPT1-203ENST00000546873 ATP11AP98196 1134 aa10.46□□□□□ -0.73
CHPT1-203ENST00000546873 COL13A1Q5TAT6 717 aaPredicted RBP10.46□□□□□ -0.73
CHPT1-203ENST00000546873 XKR5Q6UX68 686 aa10.46□□□□□ -0.73
CHPT1-203ENST00000546873 WFDC12Q8WWY7 111 aa10.46□□□□□ -0.73
CHPT1-203ENST00000546873 TP53INP1Q96A56 240 aa10.46□□□□□ -0.73
CHPT1-203ENST00000546873 LACRTQ9GZZ8 138 aa10.46□□□□□ -0.73
CHPT1-203ENST00000546873 MRPL18Q9H0U6 180 aaKnown RBP10.46□□□□□ -0.73
CHPT1-203ENST00000546873 TMEM63CQ9P1W3 806 aa10.46□□□□□ -0.73
CHPT1-203ENST00000546873 CCNB3Q8WWL7 1395 aa10.45□□□□□ -0.74
CHPT1-203ENST00000546873 DYRK3O43781 588 aa10.45□□□□□ -0.74
CHPT1-203ENST00000546873 CYP2E1P05181 493 aaPredicted RBP10.45□□□□□ -0.74
CHPT1-203ENST00000546873 H2AFB1P0C5Y9 115 aa10.45□□□□□ -0.74
CHPT1-203ENST00000546873 H2AFB2P0C5Z0 115 aa10.45□□□□□ -0.74
CHPT1-203ENST00000546873 USP5P45974 858 aa10.45□□□□□ -0.74
CHPT1-203ENST00000546873 IREB2P48200 963 aaKnown RBP10.45□□□□□ -0.74
CHPT1-203ENST00000546873 FKBP4Q02790 459 aaKnown RBP eCLIP10.45□□□□□ -0.74
CHPT1-203ENST00000546873 MTMR3Q13615 1198 aa10.45□□□□□ -0.74
CHPT1-203ENST00000546873 PBX4Q9BYU1 374 aa10.45□□□□□ -0.74
CHPT1-203ENST00000546873 NCOA1Q15788 1441 aa10.44□□□□□ -0.74
CHPT1-203ENST00000546873 PTPRAP18433 802 aa10.44□□□□□ -0.74
CHPT1-203ENST00000546873 EHHADHQ08426 723 aa10.44□□□□□ -0.74
CHPT1-203ENST00000546873 RASSF4Q9H2L5 321 aa10.44□□□□□ -0.74
CHPT1-203ENST00000546873 ZEB1P37275 1124 aaPredicted RBP10.43□□□□□ -0.74
CHPT1-203ENST00000546873 AKTIPQ9H8T0 292 aa10.43□□□□□ -0.74
CHPT1-203ENST00000546873 KANSL3Q9P2N6 904 aa10.43□□□□□ -0.74
CHPT1-203ENST00000546873 CDK13Q14004 1512 aaKnown RBP10.43□□□□□ -0.74
CHPT1-203ENST00000546873 MAGI2Q86UL8 1455 aa10.42□□□□□ -0.74
CHPT1-203ENST00000546873 NPR3P17342 541 aa10.42□□□□□ -0.74
CHPT1-203ENST00000546873 CABP4P57796 275 aa10.42□□□□□ -0.74
CHPT1-203ENST00000546873 PIP4K2BP78356 416 aa10.42□□□□□ -0.74
CHPT1-203ENST00000546873 SETDB1Q15047 1291 aa10.42□□□□□ -0.74
CHPT1-203ENST00000546873 CEP120Q8N960 986 aa10.42□□□□□ -0.74
CHPT1-203ENST00000546873 ARID3AQ99856 593 aa10.42□□□□□ -0.74
CHPT1-203ENST00000546873 GGNBP2Q9H3C7 697 aa10.42□□□□□ -0.74
CHPT1-203ENST00000546873 CNTN3Q9P232 1028 aa10.42□□□□□ -0.74
CHPT1-203ENST00000546873 POLIQ9UNA4 740 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms