RNA–Protein interactions for RNA: ENST00000525670.5

SVIP-202, Transcript of small VCP interacting protein, humanhuman

TSL 2

Gene SVIP, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-202ENST00000525670 SSBP4Q9BWG4 385 aaPredicted RBP8□□□□□ -1.13
SVIP-202ENST00000525670 GTF3C3Q9Y5Q9 886 aa8□□□□□ -1.13
SVIP-202ENST00000525670 ZNF644Q9H582 1327 aaPredicted RBP8□□□□□ -1.13
SVIP-202ENST00000525670 CAMSAP2Q08AD1 1489 aa8□□□□□ -1.13
SVIP-202ENST00000525670 ABCA6Q8N139 1617 aa8□□□□□ -1.13
SVIP-202ENST00000525670 ZBTB39O15060 712 aa7.99□□□□□ -1.13
SVIP-202ENST00000525670 EFCAB2Q5VUJ9 269 aa7.99□□□□□ -1.13
SVIP-202ENST00000525670 GDF6Q6KF10 455 aaPredicted RBP7.99□□□□□ -1.13
SVIP-202ENST00000525670 CACTIN-AS1Q8N1I8 211 aa7.99□□□□□ -1.13
SVIP-202ENST00000525670 IL22RA1Q8N6P7 574 aa7.99□□□□□ -1.13
SVIP-202ENST00000525670 OR13H1Q8NG92 308 aa7.99□□□□□ -1.13
SVIP-202ENST00000525670 GPR152Q8TDT2 470 aa7.99□□□□□ -1.13
SVIP-202ENST00000525670 WFDC12Q8WWY7 111 aa7.99□□□□□ -1.13
SVIP-202ENST00000525670 TP53INP1Q96A56 240 aa7.99□□□□□ -1.13
SVIP-202ENST00000525670 HECW2Q9P2P5 1572 aa7.99□□□□□ -1.13
SVIP-202ENST00000525670 TRAPPC8Q9Y2L5 1435 aa7.99□□□□□ -1.13
SVIP-202ENST00000525670 DLL1O00548 723 aa7.98□□□□□ -1.13
SVIP-202ENST00000525670 PRSS36Q5K4E3 855 aa7.98□□□□□ -1.13
SVIP-202ENST00000525670 TTC39BQ5VTQ0 682 aaPredicted RBP7.98□□□□□ -1.13
SVIP-202ENST00000525670 SRA1Q9HD15 236 aaKnown RBP7.98□□□□□ -1.13
SVIP-202ENST00000525670 CFDP1Q9UEE9 299 aaPredicted RBP7.98□□□□□ -1.13
SVIP-202ENST00000525670 ZMYM4Q5VZL5 1548 aa7.98□□□□□ -1.13
SVIP-202ENST00000525670 IREB2P48200 963 aaKnown RBP7.97□□□□□ -1.13
SVIP-202ENST00000525670 HNRNPMP52272 730 aaKnown RBP eCLIP7.97□□□□□ -1.13
SVIP-202ENST00000525670 HYAL2Q12891 473 aa7.97□□□□□ -1.13
SVIP-202ENST00000525670 MAP4K3Q8IVH8 894 aa7.97□□□□□ -1.13
SVIP-202ENST00000525670 AFAP1Q8N556 730 aa7.97□□□□□ -1.13
SVIP-202ENST00000525670 SEPT3Q9UH03 358 aa7.97□□□□□ -1.13
SVIP-202ENST00000525670 ARID4BQ4LE39 1312 aaPredicted RBP7.97□□□□□ -1.13
SVIP-202ENST00000525670 DIP2CQ9Y2E4 1556 aa7.97□□□□□ -1.13
SVIP-202ENST00000525670 PHLDB1Q86UU1 1377 aa7.97□□□□□ -1.13
SVIP-202ENST00000525670 ZNF518AQ6AHZ1 1483 aa7.96□□□□□ -1.13
SVIP-202ENST00000525670 NOS3P29474 1203 aa7.96□□□□□ -1.14
SVIP-202ENST00000525670 MLECQ14165 292 aa7.96□□□□□ -1.14
SVIP-202ENST00000525670 DCAF11Q8TEB1 546 aa7.96□□□□□ -1.14
SVIP-202ENST00000525670 SPACA7Q96KW9 195 aa7.96□□□□□ -1.14
SVIP-202ENST00000525670 MUC3BQ9H195 1237 aa7.96□□□□□ -1.14
SVIP-202ENST00000525670 TRIM33Q9UPN9 1127 aa7.96□□□□□ -1.14
SVIP-202ENST00000525670 KDM5CP41229 1560 aa7.96□□□□□ -1.14
SVIP-202ENST00000525670 KIDINS220Q9ULH0 1771 aa7.95□□□□□ -1.14
SVIP-202ENST00000525670 MAP3K1Q13233 1512 aa7.95□□□□□ -1.14
SVIP-202ENST00000525670 SCNN1AP37088 669 aa7.95□□□□□ -1.14
SVIP-202ENST00000525670 COL13A1Q5TAT6 717 aaPredicted RBP7.95□□□□□ -1.14
SVIP-202ENST00000525670 TMEM130Q8N3G9 435 aa7.95□□□□□ -1.14
SVIP-202ENST00000525670 ABI2Q9NYB9 513 aaPredicted RBP7.95□□□□□ -1.14
SVIP-202ENST00000525670 MADDQ8WXG6 1647 aa7.95□□□□□ -1.14
SVIP-202ENST00000525670 PTPN23Q9H3S7 1636 aa7.95□□□□□ -1.14
SVIP-202ENST00000525670 RIMS1Q86UR5 1692 aaKnown RBP7.95□□□□□ -1.14
SVIP-202ENST00000525670 MYOM3Q5VTT5 1437 aa7.95□□□□□ -1.14
SVIP-202ENST00000525670 ATP7AQ04656 1500 aa7.94□□□□□ -1.14
SVIP-202ENST00000525670 INO80Q9ULG1 1556 aaPredicted RBP7.94□□□□□ -1.14
SVIP-202ENST00000525670 RPLP1P05386 114 aaKnown RBP7.94□□□□□ -1.14
SVIP-202ENST00000525670 SETDB1Q15047 1291 aa7.94□□□□□ -1.14
SVIP-202ENST00000525670 FOXD4L6Q3SYB3 417 aaPredicted RBP7.94□□□□□ -1.14
SVIP-202ENST00000525670 PDE12Q6L8Q7 609 aaKnown RBP7.94□□□□□ -1.14
SVIP-202ENST00000525670 FOXD4L3Q6VB84 417 aaPredicted RBP7.94□□□□□ -1.14
SVIP-202ENST00000525670 MRPL18Q9H0U6 180 aaKnown RBP7.94□□□□□ -1.14
SVIP-202ENST00000525670 PPME1Q9Y570 386 aa7.94□□□□□ -1.14
SVIP-202ENST00000525670 ADGBQ8N7X0 1667 aa7.93□□□□□ -1.14
SVIP-202ENST00000525670 BCORL1Q5H9F3 1711 aa7.93□□□□□ -1.14
SVIP-202ENST00000525670 PPP1R15AO75807 674 aaPredicted RBP7.93□□□□□ -1.14
SVIP-202ENST00000525670 KIF4AO95239 1232 aa7.93□□□□□ -1.14
SVIP-202ENST00000525670 HELQQ8TDG4 1101 aa7.93□□□□□ -1.14
SVIP-202ENST00000525670 NUDT16Q96DE0 195 aaKnown RBP7.93□□□□□ -1.14
SVIP-202ENST00000525670 AKTIPQ9H8T0 292 aa7.93□□□□□ -1.14
SVIP-202ENST00000525670 ELP3Q9H9T3 547 aa7.93□□□□□ -1.14
SVIP-202ENST00000525670 CCDC141Q6ZP82 1450 aa7.93□□□□□ -1.14
SVIP-202ENST00000525670 CROCC2H7BZ55 1655 aa7.92□□□□□ -1.14
SVIP-202ENST00000525670 FER1L4A9Z1Z3 1794 aa7.92□□□□□ -1.14
SVIP-202ENST00000525670 SMNDC1O75940 238 aaKnown RBP eCLIP7.92□□□□□ -1.14
SVIP-202ENST00000525670 FAM50AQ14320 339 aaKnown RBP7.92□□□□□ -1.14
SVIP-202ENST00000525670 CEP135Q66GS9 1140 aa7.92□□□□□ -1.14
SVIP-202ENST00000525670 ATCAYQ86WG3 371 aa7.92□□□□□ -1.14
SVIP-202ENST00000525670 MEGF10Q96KG7 1140 aa7.92□□□□□ -1.14
SVIP-202ENST00000525670 C9orf84Q5VXU9 1444 aa7.92□□□□□ -1.14
SVIP-202ENST00000525670 FGD6Q6ZV73 1430 aa7.92□□□□□ -1.14
SVIP-202ENST00000525670 PLEKHH2Q8IVE3 1493 aa7.92□□□□□ -1.14
SVIP-202ENST00000525670 F8W735 103 aaPredicted RBP7.91□□□□□ -1.14
SVIP-202ENST00000525670 ATP11AP98196 1134 aa7.91□□□□□ -1.14
SVIP-202ENST00000525670 XKR5Q6UX68 686 aa7.91□□□□□ -1.14
SVIP-202ENST00000525670 DZIP1LQ8IYY4 767 aaKnown RBP7.91□□□□□ -1.14
SVIP-202ENST00000525670 CCDC82Q8N4S0 544 aa7.91□□□□□ -1.14
SVIP-202ENST00000525670 CEP120Q8N960 986 aa7.91□□□□□ -1.14
SVIP-202ENST00000525670 SPAG9O60271 1321 aaKnown RBP7.91□□□□□ -1.14
SVIP-202ENST00000525670 MBD5Q9P267 1494 aa7.9□□□□□ -1.14
SVIP-202ENST00000525670 SCO2A0A1W2PP80 73 aa7.9□□□□□ -1.14
SVIP-202ENST00000525670 LINC01387J3KSC0 135 aa7.9□□□□□ -1.14
SVIP-202ENST00000525670 ALX3O95076 343 aa7.9□□□□□ -1.14
SVIP-202ENST00000525670 CYP2E1P05181 493 aaPredicted RBP7.9□□□□□ -1.14
SVIP-202ENST00000525670 PCSK2P16519 638 aa7.9□□□□□ -1.14
SVIP-202ENST00000525670 SSFA2P28290 1259 aa7.9□□□□□ -1.14
SVIP-202ENST00000525670 CDC27P30260 824 aa7.9□□□□□ -1.14
SVIP-202ENST00000525670 ITGAEP38570 1179 aa7.9□□□□□ -1.14
SVIP-202ENST00000525670 NOM1Q5C9Z4 860 aaKnown RBP7.9□□□□□ -1.14
SVIP-202ENST00000525670 ZNF438Q7Z4V0 828 aa7.9□□□□□ -1.14
SVIP-202ENST00000525670 NCAPG2Q86XI2 1143 aa7.9□□□□□ -1.14
SVIP-202ENST00000525670 PBX4Q9BYU1 374 aa7.9□□□□□ -1.14
SVIP-202ENST00000525670 RASSF4Q9H2L5 321 aa7.9□□□□□ -1.14
SVIP-202ENST00000525670 TMEM63CQ9P1W3 806 aa7.9□□□□□ -1.14
SVIP-202ENST00000525670 ARHGEF5Q12774 1597 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms