RNA–Protein interactions for RNA: tC(GCA)G

tC(GCA)G, Transcript of Cysteine tRNA (tRNA-Cys), predicted by tRNAscan-SE analysis, yeastyeast

Gene tC(GCA)G, Length 72 nt, Biotype tRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
tC(GCA)GtC(GCA)G DSE4P53753 1117 aa3.55□□□□□ -1.84
tC(GCA)GtC(GCA)G SNO2P53823 222 aa3.55□□□□□ -1.84
tC(GCA)GtC(GCA)G PGA2P53903 129 aa3.55□□□□□ -1.84
tC(GCA)GtC(GCA)G ARK1P53974 638 aa3.55□□□□□ -1.84
tC(GCA)GtC(GCA)G YNL011CP53980 444 aa3.55□□□□□ -1.84
tC(GCA)GtC(GCA)G GCR2Q01722 534 aa3.55□□□□□ -1.84
tC(GCA)GtC(GCA)G RSM10Q03201 203 aa3.55□□□□□ -1.84
tC(GCA)GtC(GCA)G YDR444WQ04093 687 aa3.55□□□□□ -1.84
tC(GCA)GtC(GCA)G TSR1Q07381 788 aaKnown RBP3.55□□□□□ -1.84
tC(GCA)GtC(GCA)G RSB1Q08417 382 aa3.55□□□□□ -1.84
tC(GCA)GtC(GCA)G RPN8Q08723 338 aaKnown RBP3.55□□□□□ -1.84
tC(GCA)GtC(GCA)G GPM2Q12008 311 aa3.55□□□□□ -1.84
tC(GCA)GtC(GCA)G TAF10Q12030 206 aa3.55□□□□□ -1.84
tC(GCA)GtC(GCA)G YDR061WQ12298 539 aa3.55□□□□□ -1.84
tC(GCA)GtC(GCA)G LPX1Q12405 387 aaKnown RBP3.55□□□□□ -1.84
tC(GCA)GtC(GCA)G AIR2Q12476 344 aaKnown RBP3.55□□□□□ -1.84
tC(GCA)GtC(GCA)G TCP1P12612 559 aaKnown RBP3.54□□□□□ -1.84
tC(GCA)GtC(GCA)G SEC63P14906 663 aa3.54□□□□□ -1.84
tC(GCA)GtC(GCA)G CWP1P28319 239 aa3.54□□□□□ -1.84
tC(GCA)GtC(GCA)G SEF1P34228 1148 aa3.54□□□□□ -1.84
tC(GCA)GtC(GCA)G PIM1P36775 1133 aa3.54□□□□□ -1.84
tC(GCA)GtC(GCA)G ATG12P38316 186 aa3.54□□□□□ -1.84
tC(GCA)GtC(GCA)G DUN1P39009 513 aa3.54□□□□□ -1.84
tC(GCA)GtC(GCA)G SAH1P39954 449 aaKnown RBP3.54□□□□□ -1.84
tC(GCA)GtC(GCA)G MGS1P40151 587 aa3.54□□□□□ -1.84
tC(GCA)GtC(GCA)G SER33P40510 469 aa3.54□□□□□ -1.84
tC(GCA)GtC(GCA)G NPA3P47122 385 aa3.54□□□□□ -1.84
tC(GCA)GtC(GCA)G RSM7P47150 247 aa3.54□□□□□ -1.84
tC(GCA)GtC(GCA)G TIF35Q04067 274 aaKnown RBP3.54□□□□□ -1.84
tC(GCA)GtC(GCA)G ECM22Q05958 814 aaPredicted RBP3.54□□□□□ -1.84
tC(GCA)GtC(GCA)G YOL036WQ08206 761 aa3.54□□□□□ -1.84
tC(GCA)GtC(GCA)G SAM4Q08985 325 aaKnown RBP3.54□□□□□ -1.84
tC(GCA)GtC(GCA)G GLE1Q12315 538 aa3.54□□□□□ -1.84
tC(GCA)GtC(GCA)G HIS4P00815 799 aaKnown RBP3.53□□□□□ -1.84
tC(GCA)GtC(GCA)G SSD1P24276 1250 aaKnown RBP RIP-Chip data3.53□□□□□ -1.84not detected
tC(GCA)GtC(GCA)G YJU3P28321 313 aa3.53□□□□□ -1.84
tC(GCA)GtC(GCA)G SAS3P34218 831 aa3.53□□□□□ -1.84
tC(GCA)GtC(GCA)G YHR054CP38780 354 aa3.53□□□□□ -1.84
tC(GCA)GtC(GCA)G YHR078WP38799 552 aa3.53□□□□□ -1.84
tC(GCA)GtC(GCA)G AKR1P39010 764 aa3.53□□□□□ -1.84
tC(GCA)GtC(GCA)G DSN1P40568 576 aa3.53□□□□□ -1.84
tC(GCA)GtC(GCA)G PYK2P52489 506 aaKnown RBP3.53□□□□□ -1.84
tC(GCA)GtC(GCA)G FLC3P53121 802 aa3.53□□□□□ -1.84
tC(GCA)GtC(GCA)G YPL014WQ02606 381 aa3.53□□□□□ -1.84
tC(GCA)GtC(GCA)G VTC3Q02725 835 aa3.53□□□□□ -1.84
tC(GCA)GtC(GCA)G ELP4Q02884 456 aaKnown RBP3.53□□□□□ -1.84
tC(GCA)GtC(GCA)G CSM3Q04659 317 aa3.53□□□□□ -1.84
tC(GCA)GtC(GCA)G NAM7P30771 971 aaKnown RBP3.52□□□□□ -1.85
tC(GCA)GtC(GCA)G MET4P32389 672 aa3.52□□□□□ -1.85
tC(GCA)GtC(GCA)G PIH1P38768 344 aa3.52□□□□□ -1.85
tC(GCA)GtC(GCA)G CIC1P38779 376 aaKnown RBP3.52□□□□□ -1.85
tC(GCA)GtC(GCA)G ATG32P40458 529 aa3.52□□□□□ -1.85
tC(GCA)GtC(GCA)G YIL108WP40483 696 aaKnown RBP3.52□□□□□ -1.85
tC(GCA)GtC(GCA)G PCI8P40512 444 aa3.52□□□□□ -1.85
tC(GCA)GtC(GCA)G SCD6P45978 349 aaKnown RBP RIP-Chip data3.52□□□□□ -1.85not detected
tC(GCA)GtC(GCA)G BIR1P47134 954 aa3.52□□□□□ -1.85
tC(GCA)GtC(GCA)G MTD1Q02046 320 aaKnown RBP3.52□□□□□ -1.85
tC(GCA)GtC(GCA)G PUF6Q04373 656 aaKnown RBP3.52□□□□□ -1.85
tC(GCA)GtC(GCA)G THI73Q07904 523 aa3.52□□□□□ -1.85
tC(GCA)GtC(GCA)G TMS1Q12116 473 aa3.52□□□□□ -1.85
tC(GCA)GtC(GCA)G YOR097CQ12274 175 aaPredicted RBP3.52□□□□□ -1.85
tC(GCA)GtC(GCA)G SKM1Q12469 655 aa3.52□□□□□ -1.85
tC(GCA)GtC(GCA)G ASP3-2P0CX77 362 aa3.51□□□□□ -1.85
tC(GCA)GtC(GCA)G ASP3-3P0CX78 362 aa3.51□□□□□ -1.85
tC(GCA)GtC(GCA)G ASP3-4P0CX79 362 aa3.51□□□□□ -1.85
tC(GCA)GtC(GCA)G ASP3-1P0CZ17 362 aa3.51□□□□□ -1.85
tC(GCA)GtC(GCA)G ARF2P19146 181 aaKnown RBP3.51□□□□□ -1.85
tC(GCA)GtC(GCA)G PAT1P25644 796 aaKnown RBP3.51□□□□□ -1.85
tC(GCA)GtC(GCA)G CIN8P27895 1000 aa3.51□□□□□ -1.85
tC(GCA)GtC(GCA)G MRPL40P36534 297 aa3.51□□□□□ -1.85
tC(GCA)GtC(GCA)G PGM2P37012 569 aaKnown RBP3.51□□□□□ -1.85
tC(GCA)GtC(GCA)G LSM4P40070 187 aaKnown RBP3.51□□□□□ -1.85
tC(GCA)GtC(GCA)G UBP7P40453 1071 aa3.51□□□□□ -1.85
tC(GCA)GtC(GCA)G CFD1P40558 293 aa3.51□□□□□ -1.85
tC(GCA)GtC(GCA)G YLH47Q06493 454 aa3.51□□□□□ -1.85
tC(GCA)GtC(GCA)G FMP45Q07651 309 aa3.51□□□□□ -1.85
tC(GCA)GtC(GCA)G RTT10Q08924 1013 aa3.51□□□□□ -1.85
tC(GCA)GtC(GCA)G CDC16P09798 840 aa3.5□□□□□ -1.85
tC(GCA)GtC(GCA)G ABF1P14164 731 aa3.5□□□□□ -1.85
tC(GCA)GtC(GCA)G SWI4P25302 1093 aaKnown RBP3.5□□□□□ -1.85
tC(GCA)GtC(GCA)G XRS2P33301 854 aa3.5□□□□□ -1.85
tC(GCA)GtC(GCA)G UFE1P41834 346 aa3.5□□□□□ -1.85
tC(GCA)GtC(GCA)G ALR2P43553 858 aa3.5□□□□□ -1.85
tC(GCA)GtC(GCA)G IKS1P47042 667 aa3.5□□□□□ -1.85
tC(GCA)GtC(GCA)G PMT3P47190 753 aa3.5□□□□□ -1.85
tC(GCA)GtC(GCA)G ASN1P49089 572 aaKnown RBP3.5□□□□□ -1.85
tC(GCA)GtC(GCA)G YGL138CP53122 345 aa3.5□□□□□ -1.85
tC(GCA)GtC(GCA)G NOP13P53883 403 aaKnown RBP RIP-Chip data3.5□□□□□ -1.85not detected
tC(GCA)GtC(GCA)G RPC11Q04307 110 aaPredicted RBP3.5□□□□□ -1.85
tC(GCA)GtC(GCA)G RIM20Q12033 661 aa3.5□□□□□ -1.85
tC(GCA)GtC(GCA)G Q0182Q9ZZW1 134 aa3.5□□□□□ -1.85
tC(GCA)GtC(GCA)G CDC9P04819 755 aa3.49□□□□□ -1.85
tC(GCA)GtC(GCA)G SSB1P11484 613 aaKnown RBP3.49□□□□□ -1.85
tC(GCA)GtC(GCA)G LDB16P25587 256 aa3.49□□□□□ -1.85
tC(GCA)GtC(GCA)G CAP1P28495 268 aaKnown RBP3.49□□□□□ -1.85
tC(GCA)GtC(GCA)G PYC2P32327 1180 aaKnown RBP3.49□□□□□ -1.85
tC(GCA)GtC(GCA)G DSS4P32601 143 aa3.49□□□□□ -1.85
tC(GCA)GtC(GCA)G TTI1P36097 1038 aa3.49□□□□□ -1.85
tC(GCA)GtC(GCA)G SHE3P38272 425 aaKnown RBP3.49□□□□□ -1.85
tC(GCA)GtC(GCA)G FHL1P39521 936 aa3.49□□□□□ -1.85
Retrieved 100 of 5,963 RNA–protein pairs in 19.7 ms