RNA–Protein interactions for RNA: YPL104W

MSD1, Transcript of Mitochondrial aspartyl-tRNA synthetase, yeastyeast

Gene MSD1, Length 1,977 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSD1YPL104W REG2P38232 338 aa3.89□□□□□ -1.79
MSD1YPL104W PMC1P38929 1173 aaPredicted RBP3.89□□□□□ -1.79
MSD1YPL104W HMF1P40037 129 aaKnown RBP3.89□□□□□ -1.79
MSD1YPL104W NDC80P40460 691 aa3.89□□□□□ -1.79
MSD1YPL104W UBP15P50101 1230 aa3.89□□□□□ -1.79
MSD1YPL104W ARK1P53974 638 aa3.89□□□□□ -1.79
MSD1YPL104W EEB1Q02891 456 aa3.89□□□□□ -1.79
MSD1YPL104W SML1Q04964 104 aa3.89□□□□□ -1.79
MSD1YPL104W MRL1Q06815 381 aa3.89□□□□□ -1.79
MSD1YPL104W OSH2Q12451 1283 aa3.89□□□□□ -1.79
MSD1YPL104W SWI6P09959 803 aa3.88□□□□□ -1.79
MSD1YPL104W TUP1P16649 713 aa3.88□□□□□ -1.79
MSD1YPL104W GAL11P19659 1081 aa3.88□□□□□ -1.79
MSD1YPL104W CDC48P25694 835 aaKnown RBP3.88□□□□□ -1.79
MSD1YPL104W PDC6P26263 563 aaKnown RBP3.88□□□□□ -1.79
MSD1YPL104W YEL043WP32618 956 aa3.88□□□□□ -1.79
MSD1YPL104W STE5P32917 917 aa3.88□□□□□ -1.79
MSD1YPL104W ATG19P35193 415 aa3.88□□□□□ -1.79
MSD1YPL104W TVP38P36164 337 aa3.88□□□□□ -1.79
MSD1YPL104W ECM2P38241 364 aaKnown RBP3.88□□□□□ -1.79
MSD1YPL104W BSD2P38356 321 aa3.88□□□□□ -1.79
MSD1YPL104W TCD1P38756 429 aa3.88□□□□□ -1.79
MSD1YPL104W SDS3P40505 327 aa3.88□□□□□ -1.79
MSD1YPL104W EFM4P40516 257 aa3.88□□□□□ -1.79
MSD1YPL104W VPS53P47061 822 aa3.88□□□□□ -1.79
MSD1YPL104W TCB2P48231 1178 aa3.88□□□□□ -1.79
MSD1YPL104W TIM8P57744 87 aa3.88□□□□□ -1.79
MSD1YPL104W SLD5Q03406 294 aa3.88□□□□□ -1.79
MSD1YPL104W RBA50Q04418 439 aa3.88□□□□□ -1.79
MSD1YPL104W DON1Q05610 365 aa3.88□□□□□ -1.79
MSD1YPL104W VAC14Q06708 880 aa3.88□□□□□ -1.79
MSD1YPL104W RLP24Q07915 199 aaKnown RBP3.88□□□□□ -1.79
MSD1YPL104W MLH2Q07980 695 aa3.88□□□□□ -1.79
MSD1YPL104W SMC5Q08204 1093 aa3.88□□□□□ -1.79
MSD1YPL104W NOP14Q99207 810 aaKnown RBP3.88□□□□□ -1.79
MSD1YPL104W CHS2P14180 963 aa3.87□□□□□ -1.79
MSD1YPL104W STE11P23561 717 aa3.87□□□□□ -1.79
MSD1YPL104W SSD1P24276 1250 aaKnown RBP RIP-Chip data3.87□□□□□ -1.79not detected
MSD1YPL104W DPB3P27344 201 aa3.87□□□□□ -1.79
MSD1YPL104W HXT1P32465 570 aa3.87□□□□□ -1.79
MSD1YPL104W SRB4P32569 687 aa3.87□□□□□ -1.79
MSD1YPL104W JNM1P36224 373 aa3.87□□□□□ -1.79
MSD1YPL104W ERC1P38767 581 aa3.87□□□□□ -1.79
MSD1YPL104W BUD16P39988 312 aa3.87□□□□□ -1.79
MSD1YPL104W LCB2P40970 561 aa3.87□□□□□ -1.79
MSD1YPL104W TAD1P53065 400 aa3.87□□□□□ -1.79
MSD1YPL104W TAM41P53230 385 aa3.87□□□□□ -1.79
MSD1YPL104W MAL13P53338 473 aa3.87□□□□□ -1.79
MSD1YPL104W BOP3P53958 396 aa3.87□□□□□ -1.79
MSD1YPL104W ROD1Q02805 837 aa3.87□□□□□ -1.79
MSD1YPL104W YLR297WQ05899 129 aa3.87□□□□□ -1.79
MSD1YPL104W DUS4Q06063 367 aa3.87□□□□□ -1.79
MSD1YPL104W CSR1Q06705 408 aaKnown RBP3.87□□□□□ -1.79
MSD1YPL104W HVG1P0CE11 249 aa3.87□□□□□ -1.79
MSD1YPL104W HSP60P19882 572 aaKnown RBP3.87□□□□□ -1.79
MSD1YPL104W CKI1P20485 582 aa3.87□□□□□ -1.79
MSD1YPL104W RAD27P26793 382 aa3.87□□□□□ -1.79
MSD1YPL104W MRT4P33201 236 aaKnown RBP3.87□□□□□ -1.79
MSD1YPL104W TFC4P33339 1025 aa3.87□□□□□ -1.79
MSD1YPL104W YKL023WP36103 277 aaKnown RBP3.87□□□□□ -1.79
MSD1YPL104W REI1P38344 393 aaPredicted RBP3.87□□□□□ -1.79
MSD1YPL104W YEL025CP39991 1188 aa3.87□□□□□ -1.79
MSD1YPL104W MMM1P41800 426 aa3.87□□□□□ -1.79
MSD1YPL104W AVT1P47082 602 aa3.87□□□□□ -1.79
MSD1YPL104W MDR1P53258 950 aa3.87□□□□□ -1.79
MSD1YPL104W ESBP6P53918 673 aa3.87□□□□□ -1.79
MSD1YPL104W SOV1Q04748 898 aa3.87□□□□□ -1.79
MSD1YPL104W YMR321CQ04898 105 aa3.87□□□□□ -1.79
MSD1YPL104W TSR1Q07381 788 aaKnown RBP3.87□□□□□ -1.79
MSD1YPL104W DAS2Q12084 232 aa3.87□□□□□ -1.79
MSD1YPL104W TY3A-GQ12173 290 aa3.87□□□□□ -1.79
MSD1YPL104W TY3A-IQ99219 290 aa3.87□□□□□ -1.79
MSD1YPL104W MOT1P32333 1867 aa3.86□□□□□ -1.79
MSD1YPL104W CAN1P04817 590 aa3.86□□□□□ -1.79
MSD1YPL104W NAB2P32505 525 aaKnown RBP RIP-Chip data3.86□□□□□ -1.79not detected
MSD1YPL104W MUD1P32605 298 aaKnown RBP3.86□□□□□ -1.79
MSD1YPL104W KAP122P32767 1081 aa3.86□□□□□ -1.79
MSD1YPL104W COT1P32798 439 aa3.86□□□□□ -1.79
MSD1YPL104W ASH1P34233 588 aa3.86□□□□□ -1.79
MSD1YPL104W DBP7P36120 742 aaKnown RBP3.86□□□□□ -1.79
MSD1YPL104W YMR124WP39523 943 aaKnown RBP3.86□□□□□ -1.79
MSD1YPL104W PRP31P49704 494 aaPredicted RBP3.86□□□□□ -1.79
MSD1YPL104W NUT1P53114 1132 aa3.86□□□□□ -1.79
MSD1YPL104W RTT102P53330 157 aa3.86□□□□□ -1.79
MSD1YPL104W NGL3Q03210 505 aa3.86□□□□□ -1.79
MSD1YPL104W COQ9Q05779 260 aa3.86□□□□□ -1.79
MSD1YPL104W YLR001CQ07895 862 aa3.86□□□□□ -1.79
MSD1YPL104W TMA46Q12000 345 aaKnown RBP3.86□□□□□ -1.79
MSD1YPL104W YLL058WQ12198 575 aa3.86□□□□□ -1.79
MSD1YPL104W TRP2P00899 507 aaKnown RBP3.85□□□□□ -1.79
MSD1YPL104W DED1P06634 604 aaKnown RBP3.85□□□□□ -1.79
MSD1YPL104W NAM7P30771 971 aaKnown RBP3.85□□□□□ -1.79
MSD1YPL104W EFT1P32324 842 aaKnown RBP3.85□□□□□ -1.79
MSD1YPL104W IRE1P32361 1115 aa3.85□□□□□ -1.79
MSD1YPL104W ABD1P32783 436 aaPredicted RBP3.85□□□□□ -1.79
MSD1YPL104W RGT1P32862 1170 aa3.85□□□□□ -1.79
MSD1YPL104W DUR3P33413 735 aa3.85□□□□□ -1.79
MSD1YPL104W LTV1P34078 463 aa3.85□□□□□ -1.79
MSD1YPL104W RRP1P35178 278 aaPredicted RBP3.85□□□□□ -1.79
MSD1YPL104W SQT1P35184 431 aa3.85□□□□□ -1.79
Retrieved 100 of 5,963 RNA–protein pairs in 19.4 ms