RNA–Protein interactions for RNA: YLR260W

LCB5, Transcript of Minor sphingoid long-chain base kinase, yeastyeast

Gene LCB5, Length 2,064 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LCB5YLR260W SBA1P28707 216 aaKnown RBP3.91□□□□□ -1.78
LCB5YLR260W MRPL16P38064 232 aa3.91□□□□□ -1.78
LCB5YLR260W AMN1P38285 549 aaPredicted RBP3.91□□□□□ -1.78
LCB5YLR260W AFG3P39925 761 aa3.91□□□□□ -1.78
LCB5YLR260W PSF2P40359 213 aa3.91□□□□□ -1.78
LCB5YLR260W NIT2P47016 307 aa3.91□□□□□ -1.78
LCB5YLR260W CCT8P47079 568 aaKnown RBP3.91□□□□□ -1.78
LCB5YLR260W KRE33P53914 1056 aaKnown RBP3.91□□□□□ -1.78
LCB5YLR260W SPO71Q03868 1245 aa3.91□□□□□ -1.78
LCB5YLR260W NKP2Q06162 153 aa3.91□□□□□ -1.78
LCB5YLR260W TAH18Q12181 623 aa3.91□□□□□ -1.78
LCB5YLR260W SCM3Q12334 223 aa3.91□□□□□ -1.78
LCB5YLR260W MYO1P08964 1928 aa3.91□□□□□ -1.78
LCB5YLR260W TRP2P00899 507 aaKnown RBP3.91□□□□□ -1.78
LCB5YLR260W FUR1P18562 216 aaKnown RBP3.91□□□□□ -1.78
LCB5YLR260W AEP2P22136 580 aa3.91□□□□□ -1.78
LCB5YLR260W RAD16P31244 790 aa3.91□□□□□ -1.78
LCB5YLR260W PAH1P32567 862 aa3.91□□□□□ -1.78
LCB5YLR260W BCS1P32839 456 aa3.91□□□□□ -1.78
LCB5YLR260W IRS4P36115 615 aaKnown RBP3.91□□□□□ -1.78
LCB5YLR260W RFC1P38630 861 aaKnown RBP3.91□□□□□ -1.78
LCB5YLR260W LRP1P38801 184 aaKnown RBP3.91□□□□□ -1.78
LCB5YLR260W RTS1P38903 757 aa3.91□□□□□ -1.78
LCB5YLR260W PSY2P40164 858 aa3.91□□□□□ -1.78
LCB5YLR260W ROG3P43602 733 aa3.91□□□□□ -1.78
LCB5YLR260W DUG1P43616 481 aaKnown RBP3.91□□□□□ -1.78
LCB5YLR260W RET2P43621 546 aa3.91□□□□□ -1.78
LCB5YLR260W SAE2P46946 345 aa3.91□□□□□ -1.78
LCB5YLR260W BRE5P53741 515 aaKnown RBP3.91□□□□□ -1.78
LCB5YLR260W CAF120P53836 1060 aa3.91□□□□□ -1.78
LCB5YLR260W EIS1Q05050 843 aaKnown RBP3.91□□□□□ -1.78
LCB5YLR260W DUS4Q06063 367 aa3.91□□□□□ -1.78
LCB5YLR260W RSC2Q06488 889 aa3.91□□□□□ -1.78
LCB5YLR260W SUE1Q06524 206 aa3.91□□□□□ -1.78
LCB5YLR260W SPO21Q12411 609 aa3.91□□□□□ -1.78
LCB5YLR260W RAD61Q99359 647 aa3.91□□□□□ -1.78
LCB5YLR260W TUS1Q06412 1307 aa3.9□□□□□ -1.78
LCB5YLR260W NDT80P38830 627 aa3.9□□□□□ -1.78
LCB5YLR260W SEC9P40357 651 aa3.9□□□□□ -1.78
LCB5YLR260W UPF3P48412 387 aaKnown RBP3.9□□□□□ -1.78
LCB5YLR260W GNP1P48813 663 aa3.9□□□□□ -1.78
LCB5YLR260W SCS3P53012 380 aa3.9□□□□□ -1.78
LCB5YLR260W MET13P53128 600 aa3.9□□□□□ -1.78
LCB5YLR260W NPL3Q01560 414 aaKnown RBP RIP-Chip data3.9□□□□□ -1.78not detected
LCB5YLR260W RPS15Q01855 142 aaKnown RBP3.9□□□□□ -1.78
LCB5YLR260W TY1A-MR1Q04215 440 aa3.9□□□□□ -1.78
LCB5YLR260W YLR287CQ05881 355 aa3.9□□□□□ -1.78
LCB5YLR260W HSH49Q99181 213 aaPredicted RBP3.9□□□□□ -1.78
LCB5YLR260W TOP3P13099 656 aa3.9□□□□□ -1.79
LCB5YLR260W GLK1P17709 500 aaKnown RBP3.9□□□□□ -1.79
LCB5YLR260W PER1P25625 357 aa3.9□□□□□ -1.79
LCB5YLR260W DAL3P32459 195 aa3.9□□□□□ -1.79
LCB5YLR260W PET309P32522 965 aaPredicted RBP3.9□□□□□ -1.79
LCB5YLR260W SPC29P33419 253 aa3.9□□□□□ -1.79
LCB5YLR260W MYO3P36006 1272 aa3.9□□□□□ -1.79
LCB5YLR260W UBS1P38290 277 aa3.9□□□□□ -1.79
LCB5YLR260W APM2P38700 605 aa3.9□□□□□ -1.79
LCB5YLR260W VAB2P40003 282 aa3.9□□□□□ -1.79
LCB5YLR260W YIL166CP40445 542 aa3.9□□□□□ -1.79
LCB5YLR260W YML6P51998 286 aa3.9□□□□□ -1.79
LCB5YLR260W VPS62P53285 467 aa3.9□□□□□ -1.79
LCB5YLR260W YNR040WP53736 256 aa3.9□□□□□ -1.79
LCB5YLR260W ELA1P53861 379 aaPredicted RBP3.9□□□□□ -1.79
LCB5YLR260W BNI5P53890 448 aaKnown RBP3.9□□□□□ -1.79
LCB5YLR260W TAF11Q04226 346 aa3.9□□□□□ -1.79
LCB5YLR260W TDA9Q04545 1251 aa3.9□□□□□ -1.79
LCB5YLR260W EMG1Q06287 252 aaKnown RBP3.9□□□□□ -1.79
LCB5YLR260W BRE4Q07660 1125 aa3.9□□□□□ -1.79
LCB5YLR260W RIM20Q12033 661 aa3.9□□□□□ -1.79
LCB5YLR260W TY3A-GQ12173 290 aa3.9□□□□□ -1.79
LCB5YLR260W YDR461C-AQ2V2P7 80 aa3.9□□□□□ -1.79
LCB5YLR260W TY3A-IQ99219 290 aa3.9□□□□□ -1.79
LCB5YLR260W SAM1P10659 382 aaKnown RBP3.89□□□□□ -1.79
LCB5YLR260W RAD18P10862 487 aa3.89□□□□□ -1.79
LCB5YLR260W CMP2P14747 604 aa3.89□□□□□ -1.79
LCB5YLR260W PFK1P16861 987 aaKnown RBP3.89□□□□□ -1.79
LCB5YLR260W AAC3P18238 307 aa3.89□□□□□ -1.79
LCB5YLR260W GBP2P25555 427 aaKnown RBP RIP-Chip data3.89□□□□□ -1.79not detected
LCB5YLR260W RER1P25560 188 aa3.89□□□□□ -1.79
LCB5YLR260W PRP19P32523 503 aaKnown RBP3.89□□□□□ -1.79
LCB5YLR260W UTR4P32626 227 aa3.89□□□□□ -1.79
LCB5YLR260W SHP1P34223 423 aa3.89□□□□□ -1.79
LCB5YLR260W MUD2P36084 527 aaKnown RBP3.89□□□□□ -1.79
LCB5YLR260W CCC2P38995 1004 aa3.89□□□□□ -1.79
LCB5YLR260W OAF1P39720 1047 aaPredicted RBP3.89□□□□□ -1.79
LCB5YLR260W JEM1P40358 645 aa3.89□□□□□ -1.79
LCB5YLR260W YIL165CP40446 119 aa3.89□□□□□ -1.79
LCB5YLR260W QRI7P43122 407 aa3.89□□□□□ -1.79
LCB5YLR260W YJR096WP47137 282 aa3.89□□□□□ -1.79
LCB5YLR260W CTR1P49573 406 aa3.89□□□□□ -1.79
LCB5YLR260W RBG2P53295 368 aaKnown RBP3.89□□□□□ -1.79
LCB5YLR260W YAP1802P53309 568 aa3.89□□□□□ -1.79
LCB5YLR260W YKU80Q04437 629 aa3.89□□□□□ -1.79
LCB5YLR260W CIA1Q05583 330 aa3.89□□□□□ -1.79
LCB5YLR260W YPR172WQ06608 200 aa3.89□□□□□ -1.79
LCB5YLR260W ESC8Q08119 714 aa3.89□□□□□ -1.79
LCB5YLR260W SUT2Q12286 268 aa3.89□□□□□ -1.79
LCB5YLR260W PGA3Q12746 312 aaKnown RBP3.89□□□□□ -1.79
LCB5YLR260W SMC6Q12749 1114 aa3.89□□□□□ -1.79
LCB5YLR260W HBN1Q96VH4 193 aa3.89□□□□□ -1.79
Retrieved 100 of 5,963 RNA–protein pairs in 22.2 ms