RNA–Protein interactions for RNA: YIL021W

RPB3, Transcript of RNA polymerase II third largest subunit B44, yeast

Gene RPB3, Length 957 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPB3	YIL021W	RAD61	Q99359	647 aa		4.21	□□□□□ -1.74
RPB3	YIL021W	PMD1	P32634	1753 aa		4.2	□□□□□ -1.74
RPB3	YIL021W	HIS4	P00815	799 aa	Known RBP	4.2	□□□□□ -1.74
RPB3	YIL021W	UBC1	P21734	215 aa	Known RBP	4.2	□□□□□ -1.74
RPB3	YIL021W	STE11	P23561	717 aa		4.2	□□□□□ -1.74
RPB3	YIL021W	RRP43	P25359	394 aa	Predicted RBP	4.2	□□□□□ -1.74
RPB3	YIL021W	SYP1	P25623	870 aa	Known RBP	4.2	□□□□□ -1.74
RPB3	YIL021W	KRE2	P27809	442 aa		4.2	□□□□□ -1.74
RPB3	YIL021W	SEC65	P29478	273 aa		4.2	□□□□□ -1.74
RPB3	YIL021W	MLS1	P30952	554 aa		4.2	□□□□□ -1.74
RPB3	YIL021W	HIR1	P32479	840 aa		4.2	□□□□□ -1.74
RPB3	YIL021W	PXL1	P36166	706 aa		4.2	□□□□□ -1.74
RPB3	YIL021W	RGD1	P38339	666 aa		4.2	□□□□□ -1.74
RPB3	YIL021W	EFM2	P38347	419 aa		4.2	□□□□□ -1.74
RPB3	YIL021W	BCD1	P38772	366 aa		4.2	□□□□□ -1.74
RPB3	YIL021W	CTM1	P38818	585 aa		4.2	□□□□□ -1.74
RPB3	YIL021W	RTT107	P38850	1070 aa		4.2	□□□□□ -1.74
RPB3	YIL021W	SPT8	P38915	602 aa		4.2	□□□□□ -1.74
RPB3	YIL021W	MEF2	P39677	819 aa		4.2	□□□□□ -1.74
RPB3	YIL021W	VID27	P40157	782 aa		4.2	□□□□□ -1.74
RPB3	YIL021W	MPH1	P40562	993 aa		4.2	□□□□□ -1.74
RPB3	YIL021W	YGR237C	P50089	785 aa		4.2	□□□□□ -1.74
RPB3	YIL021W	YGL138C	P53122	345 aa		4.2	□□□□□ -1.74
RPB3	YIL021W	CAF130	P53280	1122 aa	Predicted RBP	4.2	□□□□□ -1.74
RPB3	YIL021W	PLB2	Q03674	706 aa		4.2	□□□□□ -1.74
RPB3	YIL021W	MYO5	Q04439	1219 aa	Known RBP	4.2	□□□□□ -1.74
RPB3	YIL021W	YDR341C	Q05506	607 aa	Known RBP	4.2	□□□□□ -1.74
RPB3	YIL021W	IRC3	Q06683	689 aa		4.2	□□□□□ -1.74
RPB3	YIL021W	RIX7	Q07844	837 aa	Known RBP	4.2	□□□□□ -1.74
RPB3	YIL021W	GIN4	Q12263	1142 aa		4.2	□□□□□ -1.74
RPB3	YIL021W	NOP14	Q99207	810 aa	Known RBP	4.2	□□□□□ -1.74
RPB3	YIL021W	HKR1	P41809	1802 aa		4.2	□□□□□ -1.74
RPB3	YIL021W	CIT1	P00890	479 aa		4.19	□□□□□ -1.74
RPB3	YIL021W	SNF3	P10870	884 aa		4.19	□□□□□ -1.74
RPB3	YIL021W	DBP5	P20449	482 aa	Known RBP	4.19	□□□□□ -1.74
RPB3	YIL021W	PRE10	P21242	288 aa	Known RBP RIP-Chip data	4.19	□□□□□ -1.74	not detected
RPB3	YIL021W	SRM1	P21827	482 aa		4.19	□□□□□ -1.74
RPB3	YIL021W	DPB3	P27344	201 aa		4.19	□□□□□ -1.74
RPB3	YIL021W	PRO3	P32263	286 aa	Known RBP	4.19	□□□□□ -1.74
RPB3	YIL021W	YEL043W	P32618	956 aa		4.19	□□□□□ -1.74
RPB3	YIL021W	STO1	P34160	861 aa	Known RBP	4.19	□□□□□ -1.74
RPB3	YIL021W	RRP1	P35178	278 aa	Predicted RBP	4.19	□□□□□ -1.74
RPB3	YIL021W	YET1	P35723	206 aa		4.19	□□□□□ -1.74
RPB3	YIL021W	BYE1	P36106	594 aa		4.19	□□□□□ -1.74
RPB3	YIL021W	LAM1	P38851	1228 aa		4.19	□□□□□ -1.74
RPB3	YIL021W	RAD26	P40352	1085 aa		4.19	□□□□□ -1.74
RPB3	YIL021W	SEC9	P40357	651 aa		4.19	□□□□□ -1.74
RPB3	YIL021W	NDC80	P40460	691 aa		4.19	□□□□□ -1.74
RPB3	YIL021W	LYS14	P40971	790 aa		4.19	□□□□□ -1.74
RPB3	YIL021W	CNN1	P43618	361 aa		4.19	□□□□□ -1.74
RPB3	YIL021W	MAL13	P53338	473 aa		4.19	□□□□□ -1.74
RPB3	YIL021W	RPT6	Q01939	405 aa	Known RBP	4.19	□□□□□ -1.74
RPB3	YIL021W	RBA50	Q04418	439 aa		4.19	□□□□□ -1.74
RPB3	YIL021W	SPP382	Q06411	708 aa	Predicted RBP	4.19	□□□□□ -1.74
RPB3	YIL021W	PSR2	Q07949	397 aa		4.19	□□□□□ -1.74
RPB3	YIL021W	HMI1	Q12039	706 aa		4.19	□□□□□ -1.74
RPB3	YIL021W	ATG9	Q12142	997 aa		4.19	□□□□□ -1.74
RPB3	YIL021W	RIB2	Q12362	591 aa	Known RBP	4.19	□□□□□ -1.74
RPB3	YIL021W	FLO1	P32768	1537 aa		4.19	□□□□□ -1.74
RPB3	YIL021W	CYC1	P00044	109 aa	Predicted RBP	4.18	□□□□□ -1.74
RPB3	YIL021W	CAF20	P12962	161 aa	Known RBP	4.18	□□□□□ -1.74
RPB3	YIL021W	CDC34	P14682	295 aa		4.18	□□□□□ -1.74
RPB3	YIL021W	THR4	P16120	514 aa	Known RBP	4.18	□□□□□ -1.74
RPB3	YIL021W	SPO11	P23179	398 aa		4.18	□□□□□ -1.74
RPB3	YIL021W	RPL8B	P29453	256 aa	Known RBP	4.18	□□□□□ -1.74
RPB3	YIL021W	MIP6	P38760	659 aa	Known RBP	4.18	□□□□□ -1.74
RPB3	YIL021W	TOM71	P38825	639 aa	Known RBP	4.18	□□□□□ -1.74
RPB3	YIL021W	CCC2	P38995	1004 aa		4.18	□□□□□ -1.74
RPB3	YIL021W	STT3	P39007	718 aa	Known RBP	4.18	□□□□□ -1.74
RPB3	YIL021W	VPS8	P39702	1274 aa		4.18	□□□□□ -1.74
RPB3	YIL021W	AIP1	P46680	615 aa	Known RBP	4.18	□□□□□ -1.74
RPB3	YIL021W	FAA4	P47912	694 aa	Known RBP	4.18	□□□□□ -1.74
RPB3	YIL021W	LYS4	P49367	693 aa	Predicted RBP	4.18	□□□□□ -1.74
RPB3	YIL021W	TAN1	P53072	289 aa	Predicted RBP	4.18	□□□□□ -1.74
RPB3	YIL021W	GCN5	Q03330	439 aa		4.18	□□□□□ -1.74
RPB3	YIL021W	EBS1	Q03466	884 aa	Known RBP	4.18	□□□□□ -1.74
RPB3	YIL021W	SML1	Q04964	104 aa		4.18	□□□□□ -1.74
RPB3	YIL021W	YLR287C	Q05881	355 aa		4.18	□□□□□ -1.74
RPB3	YIL021W	DUS4	Q06063	367 aa		4.18	□□□□□ -1.74
RPB3	YIL021W	RSB1	Q08417	382 aa		4.18	□□□□□ -1.74
RPB3	YIL021W	CLF1	Q12309	687 aa	Predicted RBP	4.18	□□□□□ -1.74
RPB3	YIL021W	MTF2	P10849	440 aa		4.17	□□□□□ -1.74
RPB3	YIL021W	STI1	P15705	589 aa	Known RBP RIP-Chip data	4.17	□□□□□ -1.74	not detected
RPB3	YIL021W	PUF4	P25339	888 aa	Known RBP RIP-Chip data	4.17	□□□□□ -1.74	not detected
RPB3	YIL021W	PSO2	P30620	661 aa		4.17	□□□□□ -1.74
RPB3	YIL021W	DUT1	P33317	147 aa		4.17	□□□□□ -1.74
RPB3	YIL021W	CBF5	P33322	483 aa	Known RBP RIP-Chip data	4.17	□□□□□ -1.74	not detected
RPB3	YIL021W	YKL091C	P33324	310 aa	Known RBP	4.17	□□□□□ -1.74
RPB3	YIL021W	SAS3	P34218	831 aa		4.17	□□□□□ -1.74
RPB3	YIL021W	PFF1	P38244	976 aa		4.17	□□□□□ -1.74
RPB3	YIL021W	CCT3	P39077	534 aa	Known RBP	4.17	□□□□□ -1.74
RPB3	YIL021W	CCT4	P39078	528 aa	Known RBP	4.17	□□□□□ -1.74
RPB3	YIL021W	VTC2	P43585	828 aa		4.17	□□□□□ -1.74
RPB3	YIL021W	YJL049W	P47048	450 aa		4.17	□□□□□ -1.74
RPB3	YIL021W	HNT2	P49775	206 aa		4.17	□□□□□ -1.74
RPB3	YIL021W	UBA2	P52488	636 aa		4.17	□□□□□ -1.74
RPB3	YIL021W	NNF2	P53253	936 aa		4.17	□□□□□ -1.74
RPB3	YIL021W	ERG5	P54781	538 aa		4.17	□□□□□ -1.74
RPB3	YIL021W	PRP3	Q03338	469 aa	Predicted RBP	4.17	□□□□□ -1.74
RPB3	YIL021W	CLU1	Q03690	1277 aa	Known RBP	4.17	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 22 ms