RNA–Protein interactions for RNA: YHR027C

RPN1, Transcript of Non-ATPase base subunit of the 19S RP of the 26S proteasome, yeastyeast

Gene RPN1, Length 2,982 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPN1YHR027C PMS1P14242 873 aa3.27□□□□□ -1.89
RPN1YHR027C VMA2P16140 517 aaKnown RBP3.27□□□□□ -1.89
RPN1YHR027C VPS3P23643 1011 aa3.27□□□□□ -1.89
RPN1YHR027C YME1P32795 747 aa3.27□□□□□ -1.89
RPN1YHR027C SMC1P32908 1225 aa3.27□□□□□ -1.89
RPN1YHR027C SAS3P34218 831 aa3.27□□□□□ -1.89
RPN1YHR027C CLG1P35190 452 aa3.27□□□□□ -1.89
RPN1YHR027C MRPL17P36528 281 aa3.27□□□□□ -1.89
RPN1YHR027C YHL017WP38745 532 aa3.27□□□□□ -1.89
RPN1YHR027C YTA6P40328 754 aa3.27□□□□□ -1.89
RPN1YHR027C MNT3P40549 630 aa3.27□□□□□ -1.89
RPN1YHR027C BRE2P43132 505 aa3.27□□□□□ -1.89
RPN1YHR027C MDE1P47095 244 aa3.27□□□□□ -1.89
RPN1YHR027C ISM1P48526 1002 aa3.27□□□□□ -1.89
RPN1YHR027C PSP2P50109 593 aaKnown RBP3.27□□□□□ -1.89
RPN1YHR027C PSP1P50896 841 aaKnown RBP3.27□□□□□ -1.89
RPN1YHR027C PEF1P53238 335 aa3.27□□□□□ -1.89
RPN1YHR027C DMA2P53924 522 aa3.27□□□□□ -1.89
RPN1YHR027C TMA20P89886 181 aaPredicted RBP3.27□□□□□ -1.89
RPN1YHR027C SRP1Q02821 542 aaKnown RBP3.27□□□□□ -1.89
RPN1YHR027C ARP9Q05123 467 aa3.27□□□□□ -1.89
RPN1YHR027C PHM6Q05637 104 aa3.27□□□□□ -1.89
RPN1YHR027C HIM1Q06674 414 aa3.27□□□□□ -1.89
RPN1YHR027C YDL124WQ07551 312 aaKnown RBP3.27□□□□□ -1.89
RPN1YHR027C TRE1Q08919 783 aa3.27□□□□□ -1.89
RPN1YHR027C NEW1Q08972 1196 aaKnown RBP3.27□□□□□ -1.89
RPN1YHR027C IPP1P00817 287 aaKnown RBP3.27□□□□□ -1.89
RPN1YHR027C LEU2P04173 364 aaPredicted RBP3.27□□□□□ -1.89
RPN1YHR027C PRI1P10363 409 aa3.27□□□□□ -1.89
RPN1YHR027C RAP1P11938 827 aa3.27□□□□□ -1.89
RPN1YHR027C RED1P14291 827 aa3.27□□□□□ -1.89
RPN1YHR027C SPO12P17123 173 aa3.27□□□□□ -1.89
RPN1YHR027C SIT4P20604 311 aa3.27□□□□□ -1.89
RPN1YHR027C ISY1P21374 235 aaPredicted RBP3.27□□□□□ -1.89
RPN1YHR027C SPO11P23179 398 aa3.27□□□□□ -1.89
RPN1YHR027C PAT1P25644 796 aaKnown RBP3.27□□□□□ -1.89
RPN1YHR027C SRB4P32569 687 aa3.27□□□□□ -1.89
RPN1YHR027C RPT1P33299 467 aaKnown RBP3.27□□□□□ -1.89
RPN1YHR027C PTC3P34221 468 aaKnown RBP3.27□□□□□ -1.89
RPN1YHR027C SET3P36124 751 aa3.27□□□□□ -1.89
RPN1YHR027C OTU2P38747 307 aaKnown RBP3.27□□□□□ -1.89
RPN1YHR027C RGA1P39083 1007 aa3.27□□□□□ -1.89
RPN1YHR027C GEM1P39722 662 aa3.27□□□□□ -1.89
RPN1YHR027C SER3P40054 469 aa3.27□□□□□ -1.89
RPN1YHR027C ALG5P40350 334 aa3.27□□□□□ -1.89
RPN1YHR027C YNL320WP42840 284 aa3.27□□□□□ -1.89
RPN1YHR027C ATH1P48016 1211 aa3.27□□□□□ -1.89
RPN1YHR027C ABZ2Q03266 374 aa3.27□□□□□ -1.89
RPN1YHR027C VPS64Q03944 604 aa3.27□□□□□ -1.89
RPN1YHR027C YLR407WQ06070 228 aa3.27□□□□□ -1.89
RPN1YHR027C YCS4Q06156 1176 aa3.27□□□□□ -1.89
RPN1YHR027C YEH2Q07950 538 aa3.27□□□□□ -1.89
RPN1YHR027C SIL1Q08199 421 aa3.27□□□□□ -1.89
RPN1YHR027C BUG1Q12191 341 aa3.27□□□□□ -1.89
RPN1YHR027C SEM1O94742 89 aa3.26□□□□□ -1.89
RPN1YHR027C CYB2P00175 591 aa3.26□□□□□ -1.89
RPN1YHR027C DBP3P20447 523 aaKnown RBP3.26□□□□□ -1.89
RPN1YHR027C DBF2P22204 572 aa3.26□□□□□ -1.89
RPN1YHR027C RET1P22276 1149 aaKnown RBP3.26□□□□□ -1.89
RPN1YHR027C SWI4P25302 1093 aaKnown RBP3.26□□□□□ -1.89
RPN1YHR027C RPC53P25441 422 aa3.26□□□□□ -1.89
RPN1YHR027C PEP3P27801 918 aa3.26□□□□□ -1.89
RPN1YHR027C PRR1P28708 518 aa3.26□□□□□ -1.89
RPN1YHR027C ITR1P30605 584 aa3.26□□□□□ -1.89
RPN1YHR027C HXT1P32465 570 aa3.26□□□□□ -1.89
RPN1YHR027C ADE17P38009 592 aaKnown RBP3.26□□□□□ -1.89
RPN1YHR027C RDH54P38086 958 aa3.26□□□□□ -1.89
RPN1YHR027C SWC5P38326 303 aa3.26□□□□□ -1.89
RPN1YHR027C YHI9P38765 294 aa3.26□□□□□ -1.89
RPN1YHR027C ZRG8P40021 1076 aa3.26□□□□□ -1.89
RPN1YHR027C SLX8P40072 274 aa3.26□□□□□ -1.89
RPN1YHR027C YER137CP40083 148 aaKnown RBP3.26□□□□□ -1.89
RPN1YHR027C CAB2P40506 365 aa3.26□□□□□ -1.89
RPN1YHR027C DSD1P53095 428 aa3.26□□□□□ -1.89
RPN1YHR027C RPT6Q01939 405 aaKnown RBP3.26□□□□□ -1.89
RPN1YHR027C MTC5Q03897 1148 aa3.26□□□□□ -1.89
RPN1YHR027C HMO1Q03973 246 aaKnown RBP3.26□□□□□ -1.89
RPN1YHR027C SHE9Q04172 456 aa3.26□□□□□ -1.89
RPN1YHR027C VPS36Q06696 566 aa3.26□□□□□ -1.89
RPN1YHR027C MLH2Q07980 695 aa3.26□□□□□ -1.89
RPN1YHR027C YLR278CQ05854 1341 aa3.26□□□□□ -1.89
RPN1YHR027C RPS6AP0CX37 236 aaKnown RBP3.26□□□□□ -1.89
RPN1YHR027C RPS6BP0CX38 236 aaPredicted RBP3.26□□□□□ -1.89
RPN1YHR027C GFA1P14742 717 aaKnown RBP3.26□□□□□ -1.89
RPN1YHR027C MSD1P15179 658 aaKnown RBP3.26□□□□□ -1.89
RPN1YHR027C SRV2P17555 526 aaKnown RBP3.26□□□□□ -1.89
RPN1YHR027C PMA2P19657 947 aa3.26□□□□□ -1.89
RPN1YHR027C HNM1P19807 563 aa3.26□□□□□ -1.89
RPN1YHR027C HSP60P19882 572 aaKnown RBP3.26□□□□□ -1.89
RPN1YHR027C APN1P22936 367 aa3.26□□□□□ -1.89
RPN1YHR027C PKC1P24583 1151 aa3.26□□□□□ -1.89
RPN1YHR027C FRD1P32614 470 aaKnown RBP3.26□□□□□ -1.89
RPN1YHR027C ECM31P38122 312 aa3.26□□□□□ -1.89
RPN1YHR027C BOL3P39724 118 aa3.26□□□□□ -1.89
RPN1YHR027C FAF1P40546 346 aaPredicted RBP3.26□□□□□ -1.89
RPN1YHR027C BUB1P41695 1021 aaKnown RBP RIP-Chip data3.26□□□□□ -1.89not detected
RPN1YHR027C SWP82P43554 623 aa3.26□□□□□ -1.89
RPN1YHR027C HGH1P48362 394 aaKnown RBP3.26□□□□□ -1.89
RPN1YHR027C EFM5P53200 248 aaKnown RBP3.26□□□□□ -1.89
RPN1YHR027C OSH6Q02201 448 aa3.26□□□□□ -1.89
Retrieved 100 of 5,963 RNA–protein pairs in 55.6 ms