RNA–Protein interactions for RNA: YGR194C

XKS1, Transcript of Xylulokinase, yeast

Gene XKS1, Length 1,803 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
XKS1	YGR194C	MAD1	P40957	749 aa		4.69	□□□□□ -1.66
XKS1	YGR194C	AVT1	P47082	602 aa		4.69	□□□□□ -1.66
XKS1	YGR194C	NGL3	Q03210	505 aa		4.69	□□□□□ -1.66
XKS1	YGR194C	FCP1	Q03254	732 aa		4.69	□□□□□ -1.66
XKS1	YGR194C	SPN1	Q06505	410 aa	Predicted RBP	4.69	□□□□□ -1.66
XKS1	YGR194C	OPY2	Q06810	360 aa		4.69	□□□□□ -1.66
XKS1	YGR194C	APL5	Q08951	932 aa	Known RBP	4.69	□□□□□ -1.66
XKS1	YGR194C	PLP2	Q12017	286 aa		4.69	□□□□□ -1.66
XKS1	YGR194C	TAH18	Q12181	623 aa		4.69	□□□□□ -1.66
XKS1	YGR194C	LAM4	P38800	1345 aa		4.69	□□□□□ -1.66
XKS1	YGR194C	ARG4	P04076	463 aa	Predicted RBP	4.68	□□□□□ -1.66
XKS1	YGR194C	YSC84	P32793	468 aa		4.68	□□□□□ -1.66
XKS1	YGR194C	BMH2	P34730	273 aa	Known RBP	4.68	□□□□□ -1.66
XKS1	YGR194C	LAS1	P36146	502 aa	Predicted RBP	4.68	□□□□□ -1.66
XKS1	YGR194C	SPP381	P38282	291 aa	Predicted RBP	4.68	□□□□□ -1.66
XKS1	YGR194C	CRG1	P38892	291 aa	RIP-Chip data	4.68	□□□□□ -1.66	not detected
XKS1	YGR194C	RRP8	P38961	392 aa	Known RBP	4.68	□□□□□ -1.66
XKS1	YGR194C	CCT2	P39076	527 aa	Known RBP	4.68	□□□□□ -1.66
XKS1	YGR194C	NCS2	P53923	493 aa	Predicted RBP	4.68	□□□□□ -1.66
XKS1	YGR194C	BET4	Q00618	327 aa		4.68	□□□□□ -1.66
XKS1	YGR194C	UBX2	Q04228	584 aa		4.68	□□□□□ -1.66
XKS1	YGR194C	CSR1	Q06705	408 aa	Known RBP	4.68	□□□□□ -1.66
XKS1	YGR194C	DFG16	Q99234	619 aa		4.68	□□□□□ -1.66
XKS1	YGR194C	GCD2	P12754	651 aa	Predicted RBP	4.67	□□□□□ -1.66
XKS1	YGR194C	GFA1	P14742	717 aa	Known RBP	4.67	□□□□□ -1.66
XKS1	YGR194C	KAR3	P17119	729 aa		4.67	□□□□□ -1.66
XKS1	YGR194C	PRP45	P28004	379 aa	Predicted RBP	4.67	□□□□□ -1.66
XKS1	YGR194C	MDL2	P33311	773 aa		4.67	□□□□□ -1.66
XKS1	YGR194C	GTS1	P40956	396 aa		4.67	□□□□□ -1.66
XKS1	YGR194C	IES1	P43579	692 aa		4.67	□□□□□ -1.66
XKS1	YGR194C	GTR1	Q00582	310 aa		4.67	□□□□□ -1.66
XKS1	YGR194C	TFB2	Q02939	513 aa		4.67	□□□□□ -1.66
XKS1	YGR194C	GIR2	Q03768	265 aa	Predicted RBP	4.67	□□□□□ -1.66
XKS1	YGR194C	URH1	Q04179	340 aa		4.67	□□□□□ -1.66
XKS1	YGR194C	VTI1	Q04338	217 aa		4.67	□□□□□ -1.66
XKS1	YGR194C	SOV1	Q04748	898 aa		4.67	□□□□□ -1.66
XKS1	YGR194C	MMR1	Q06324	491 aa		4.67	□□□□□ -1.66
XKS1	YGR194C	SPP382	Q06411	708 aa	Predicted RBP	4.67	□□□□□ -1.66
XKS1	YGR194C	NKP1	Q12493	238 aa		4.67	□□□□□ -1.66
XKS1	YGR194C	YIL177C	P40434	1758 aa		4.67	□□□□□ -1.66
XKS1	YGR194C	YJL225C	P40889	1758 aa		4.67	□□□□□ -1.66
XKS1	YGR194C	PRP4	P20053	465 aa	Known RBP	4.67	□□□□□ -1.66
XKS1	YGR194C	OSM1	P21375	501 aa	Known RBP	4.67	□□□□□ -1.66
XKS1	YGR194C	SRO9	P25567	434 aa	Known RBP	4.67	□□□□□ -1.66
XKS1	YGR194C	SEG2	P34250	1132 aa		4.67	□□□□□ -1.66
XKS1	YGR194C	OAF3	P36023	863 aa		4.67	□□□□□ -1.66
XKS1	YGR194C	BCD1	P38772	366 aa		4.67	□□□□□ -1.66
XKS1	YGR194C	LAM1	P38851	1228 aa		4.67	□□□□□ -1.66
XKS1	YGR194C	VFA1	P40080	203 aa		4.67	□□□□□ -1.66
XKS1	YGR194C	HFM1	P51979	1187 aa		4.67	□□□□□ -1.66
XKS1	YGR194C	YBP2	P53169	641 aa		4.67	□□□□□ -1.66
XKS1	YGR194C	MFM1	Q02783	413 aa		4.67	□□□□□ -1.66
XKS1	YGR194C	UBP16	Q02863	499 aa		4.67	□□□□□ -1.66
XKS1	YGR194C	SSP2	Q08646	371 aa		4.67	□□□□□ -1.66
XKS1	YGR194C	RTT10	Q08924	1013 aa		4.67	□□□□□ -1.66
XKS1	YGR194C	NEW1	Q08972	1196 aa	Known RBP	4.67	□□□□□ -1.66
XKS1	YGR194C	FKS3	Q04952	1785 aa		4.66	□□□□□ -1.66
XKS1	YGR194C	TY4B-H	P0C2J7	1802 aa		4.66	□□□□□ -1.66
XKS1	YGR194C	TY4B-J	P47024	1803 aa		4.66	□□□□□ -1.66
XKS1	YGR194C	HIS4	P00815	799 aa	Known RBP	4.66	□□□□□ -1.66
XKS1	YGR194C	PPR1	P07272	904 aa	Predicted RBP	4.66	□□□□□ -1.66
XKS1	YGR194C	DUT1	P33317	147 aa		4.66	□□□□□ -1.66
XKS1	YGR194C	GRX7	P38068	203 aa		4.66	□□□□□ -1.66
XKS1	YGR194C	SMC2	P38989	1170 aa	Known RBP	4.66	□□□□□ -1.66
XKS1	YGR194C	GPB2	P39717	880 aa		4.66	□□□□□ -1.66
XKS1	YGR194C	YIL001W	P40560	513 aa		4.66	□□□□□ -1.66
XKS1	YGR194C	ECL1	P48235	211 aa		4.66	□□□□□ -1.66
XKS1	YGR194C	YNL144C	P53907	740 aa		4.66	□□□□□ -1.66
XKS1	YGR194C	SPC24	Q04477	213 aa		4.66	□□□□□ -1.66
XKS1	YGR194C	POB3	Q04636	552 aa	Known RBP	4.66	□□□□□ -1.66
XKS1	YGR194C	MRD1	Q06106	887 aa	Known RBP	4.66	□□□□□ -1.66
XKS1	YGR194C	RCL1	Q08096	367 aa	Predicted RBP	4.66	□□□□□ -1.66
XKS1	YGR194C	CWC2	Q12046	339 aa	Predicted RBP	4.66	□□□□□ -1.66
XKS1	YGR194C	PIF1	P07271	859 aa		4.65	□□□□□ -1.66
XKS1	YGR194C	RPB2	P08518	1224 aa	Known RBP	4.65	□□□□□ -1.66
XKS1	YGR194C	SYP1	P25623	870 aa	Known RBP	4.65	□□□□□ -1.66
XKS1	YGR194C	UBC6	P33296	250 aa	Predicted RBP	4.65	□□□□□ -1.66
XKS1	YGR194C	RPT3	P33298	428 aa	Known RBP	4.65	□□□□□ -1.66
XKS1	YGR194C	TFC3	P34111	1160 aa		4.65	□□□□□ -1.66
XKS1	YGR194C	BAP2	P38084	609 aa		4.65	□□□□□ -1.66
XKS1	YGR194C	TDA3	P38758	523 aa		4.65	□□□□□ -1.66
XKS1	YGR194C	AIP1	P46680	615 aa	Known RBP	4.65	□□□□□ -1.66
XKS1	YGR194C	ERP6	P53198	216 aa		4.65	□□□□□ -1.66
XKS1	YGR194C	YKU80	Q04437	629 aa		4.65	□□□□□ -1.66
XKS1	YGR194C	ERV41	Q04651	352 aa		4.65	□□□□□ -1.66
XKS1	YGR194C	PIG1	Q06216	648 aa		4.65	□□□□□ -1.66
XKS1	YGR194C	YLR177W	Q06251	628 aa		4.65	□□□□□ -1.66
XKS1	YGR194C	ATG13	Q06628	738 aa		4.65	□□□□□ -1.66
XKS1	YGR194C	SPO75	Q07798	868 aa		4.65	□□□□□ -1.66
XKS1	YGR194C	YAP7	Q08182	245 aa		4.65	□□□□□ -1.66
XKS1	YGR194C	YOL075C	Q08234	1294 aa		4.65	□□□□□ -1.66
XKS1	YGR194C	SLK19	Q08581	821 aa	Known RBP	4.65	□□□□□ -1.66
XKS1	YGR194C	YPL260W	Q08977	551 aa		4.65	□□□□□ -1.66
XKS1	YGR194C	ZRT2	Q12436	422 aa		4.65	□□□□□ -1.66
XKS1	YGR194C	MCM3	P24279	971 aa	Known RBP	4.65	□□□□□ -1.67
XKS1	YGR194C	HEK2	P38199	381 aa	Known RBP RIP-Chip data	4.65	□□□□□ -1.67	not detected
XKS1	YGR194C	CNN1	P43618	361 aa		4.65	□□□□□ -1.67
XKS1	YGR194C	RTC4	P53850	401 aa		4.65	□□□□□ -1.67
XKS1	YGR194C	GDE1	Q02979	1223 aa		4.65	□□□□□ -1.67
XKS1	YGR194C	GRX3	Q03835	250 aa		4.65	□□□□□ -1.67

Retrieved 100 of 5,963 RNA–protein pairs in 500.3 ms