RNA–Protein interactions for RNA: YGR140W

CBF2, Transcript of Essential kinetochore protein, yeastyeast

Gene CBF2, Length 2,871 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CBF2YGR140W Q0142Q9ZZW4 58 aa2.57□□□□□ -2
CBF2YGR140W VAS1P07806 1104 aaKnown RBP2.56□□□□□ -2
CBF2YGR140W SWI6P09959 803 aa2.56□□□□□ -2
CBF2YGR140W CBP3P21560 335 aa2.56□□□□□ -2
CBF2YGR140W YHR202WP38887 602 aa2.56□□□□□ -2
CBF2YGR140W SSP120P39931 234 aaKnown RBP2.56□□□□□ -2
CBF2YGR140W FOL2P51601 243 aaKnown RBP2.56□□□□□ -2
CBF2YGR140W YKU80Q04437 629 aa2.56□□□□□ -2
CBF2YGR140W OPT2Q06593 877 aa2.56□□□□□ -2
CBF2YGR140W NBP2Q12163 236 aa2.56□□□□□ -2
CBF2YGR140W ZRT2Q12436 422 aa2.56□□□□□ -2
CBF2YGR140W YBR182C-AQ8TGU6 64 aa2.56□□□□□ -2
CBF2YGR140W SEM1O94742 89 aa2.56□□□□□ -2
CBF2YGR140W RPS17AP02407 136 aaKnown RBP2.56□□□□□ -2
CBF2YGR140W GLN4P13188 809 aaKnown RBP2.56□□□□□ -2
CBF2YGR140W RPS17BP14127 136 aaKnown RBP2.56□□□□□ -2
CBF2YGR140W PRE8P23639 250 aa2.56□□□□□ -2
CBF2YGR140W HXT4P32467 576 aa2.56□□□□□ -2
CBF2YGR140W SLN1P39928 1220 aaPredicted RBP2.56□□□□□ -2
CBF2YGR140W YIL108WP40483 696 aaKnown RBP2.56□□□□□ -2
CBF2YGR140W PRM2P40534 656 aa2.56□□□□□ -2
CBF2YGR140W RAI1P53063 387 aaKnown RBP2.56□□□□□ -2
CBF2YGR140W MDR1P53258 950 aa2.56□□□□□ -2
CBF2YGR140W YNR061CP53747 219 aa2.56□□□□□ -2
CBF2YGR140W DSE4P53753 1117 aa2.56□□□□□ -2
CBF2YGR140W YKR011CQ02209 353 aa2.56□□□□□ -2
CBF2YGR140W TDA9Q04545 1251 aa2.56□□□□□ -2
CBF2YGR140W PUS7Q08647 676 aaKnown RBP2.56□□□□□ -2
CBF2YGR140W HUA2Q12134 243 aa2.56□□□□□ -2
CBF2YGR140W YDR461C-AQ2V2P7 80 aa2.56□□□□□ -2
CBF2YGR140W CDC16P09798 840 aa2.55□□□□□ -2
CBF2YGR140W MTF2P10849 440 aa2.55□□□□□ -2
CBF2YGR140W GUK1P15454 187 aaKnown RBP2.55□□□□□ -2
CBF2YGR140W UBC1P21734 215 aaKnown RBP2.55□□□□□ -2
CBF2YGR140W MIH1P23748 554 aa2.55□□□□□ -2
CBF2YGR140W APN2P38207 520 aa2.55□□□□□ -2
CBF2YGR140W RFC1P38630 861 aaKnown RBP2.55□□□□□ -2
CBF2YGR140W YHL012WP38709 493 aa2.55□□□□□ -2
CBF2YGR140W LAM1P38851 1228 aa2.55□□□□□ -2
CBF2YGR140W CAJ1P39101 391 aa2.55□□□□□ -2
CBF2YGR140W SWD1P39706 426 aa2.55□□□□□ -2
CBF2YGR140W SPC72P39723 622 aa2.55□□□□□ -2
CBF2YGR140W YFL054CP43549 646 aa2.55□□□□□ -2
CBF2YGR140W MTR3P48240 250 aaPredicted RBP2.55□□□□□ -2
CBF2YGR140W PSP2P50109 593 aaKnown RBP2.55□□□□□ -2
CBF2YGR140W EXG2P52911 562 aa2.55□□□□□ -2
CBF2YGR140W YBP2P53169 641 aa2.55□□□□□ -2
CBF2YGR140W CUZ1P53899 274 aa2.55□□□□□ -2
CBF2YGR140W NSE5Q03718 556 aa2.55□□□□□ -2
CBF2YGR140W SGO1Q08490 590 aa2.55□□□□□ -2
CBF2YGR140W HOS1Q12214 470 aa2.55□□□□□ -2
CBF2YGR140W SVS1Q12254 260 aa2.55□□□□□ -2
CBF2YGR140W ISA2Q12425 185 aa2.55□□□□□ -2
CBF2YGR140W YLR149CQ99296 730 aa2.55□□□□□ -2
CBF2YGR140W TPK1P06244 397 aa2.55□□□□□ -2
CBF2YGR140W YEL076C-AP0CX16 216 aa2.55□□□□□ -2
CBF2YGR140W YLR464WP0CX17 216 aa2.55□□□□□ -2
CBF2YGR140W KIN2P13186 1147 aaKnown RBP2.55□□□□□ -2
CBF2YGR140W POL3P15436 1097 aa2.55□□□□□ -2
CBF2YGR140W ATP12P22135 325 aa2.55□□□□□ -2
CBF2YGR140W YKL100CP34248 587 aa2.55□□□□□ -2
CBF2YGR140W BYE1P36106 594 aa2.55□□□□□ -2
CBF2YGR140W GPT2P36148 743 aa2.55□□□□□ -2
CBF2YGR140W ABZ1P37254 787 aaPredicted RBP2.55□□□□□ -2
CBF2YGR140W GLY1P37303 387 aaKnown RBP2.55□□□□□ -2
CBF2YGR140W AXL2P38928 823 aa2.55□□□□□ -2
CBF2YGR140W YEL076CP39971 216 aa2.55□□□□□ -2
CBF2YGR140W YJR039WP47107 1121 aa2.55□□□□□ -2
CBF2YGR140W HXT16P47185 567 aa2.55□□□□□ -2
CBF2YGR140W YKE2P52553 114 aa2.55□□□□□ -2
CBF2YGR140W CPR6P53691 371 aaKnown RBP2.55□□□□□ -2
CBF2YGR140W ARC35P53731 342 aaKnown RBP2.55□□□□□ -2
CBF2YGR140W SDH1Q00711 640 aa2.55□□□□□ -2
CBF2YGR140W GIS4Q04233 774 aa2.55□□□□□ -2
CBF2YGR140W MFB1Q04922 465 aa2.55□□□□□ -2
CBF2YGR140W YOR059CQ08448 450 aaKnown RBP2.55□□□□□ -2
CBF2YGR140W CYB2P00175 591 aa2.55□□□□□ -2
CBF2YGR140W FUM1P08417 488 aaKnown RBP2.55□□□□□ -2
CBF2YGR140W ADH4P10127 382 aa2.55□□□□□ -2
CBF2YGR140W STE13P33894 931 aa2.55□□□□□ -2
CBF2YGR140W APT2P36973 181 aa2.55□□□□□ -2
CBF2YGR140W NOP4P37838 685 aaKnown RBP2.55□□□□□ -2
CBF2YGR140W YHR033WP38690 423 aa2.55□□□□□ -2
CBF2YGR140W UTP9P38882 575 aaKnown RBP2.55□□□□□ -2
CBF2YGR140W YEL025CP39991 1188 aa2.55□□□□□ -2
CBF2YGR140W NPP2P39997 493 aa2.55□□□□□ -2
CBF2YGR140W JEM1P40358 645 aa2.55□□□□□ -2
CBF2YGR140W DPH1P40487 425 aaKnown RBP2.55□□□□□ -2
CBF2YGR140W LYS14P40971 790 aa2.55□□□□□ -2
CBF2YGR140W DUS1P53759 423 aaKnown RBP2.55□□□□□ -2
CBF2YGR140W NOP15P53927 220 aaPredicted RBP2.55□□□□□ -2
CBF2YGR140W TIM10P87108 93 aa2.55□□□□□ -2
CBF2YGR140W CIA1Q05583 330 aa2.55□□□□□ -2
CBF2YGR140W ISA1Q07821 250 aaPredicted RBP2.55□□□□□ -2
CBF2YGR140W VPS5Q92331 675 aa2.55□□□□□ -2
CBF2YGR140W GCN4P03069 281 aa2.54□□□□□ -2
CBF2YGR140W SNF5P18480 905 aa2.54□□□□□ -2
CBF2YGR140W NAR1P23503 491 aaKnown RBP2.54□□□□□ -2
CBF2YGR140W MCM3P24279 971 aaKnown RBP2.54□□□□□ -2
CBF2YGR140W SWC3P31376 625 aa2.54□□□□□ -2
Retrieved 100 of 5,963 RNA–protein pairs in 125.2 ms