RNA–Protein interactions for RNA: YGL212W

VAM7, Transcript of Vacuolar SNARE protein, yeast

Gene VAM7, Length 951 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VAM7	YGL212W	PSO2	P30620	661 aa		5.8	□□□□□ -1.48
VAM7	YGL212W	PUP2	P32379	260 aa		5.8	□□□□□ -1.48
VAM7	YGL212W	SLA1	P32790	1244 aa		5.8	□□□□□ -1.48
VAM7	YGL212W	MDL1	P33310	695 aa		5.8	□□□□□ -1.48
VAM7	YGL212W	MIA40	P36046	403 aa		5.8	□□□□□ -1.48
VAM7	YGL212W	EDS1	P38073	919 aa		5.8	□□□□□ -1.48
VAM7	YGL212W	ERG7	P38604	731 aa		5.8	□□□□□ -1.48
VAM7	YGL212W	BUD16	P39988	312 aa		5.8	□□□□□ -1.48
VAM7	YGL212W	YIL161W	P40449	235 aa	Known RBP	5.8	□□□□□ -1.48
VAM7	YGL212W	PKP1	P40530	394 aa		5.8	□□□□□ -1.48
VAM7	YGL212W	NPY1	P53164	384 aa		5.8	□□□□□ -1.48
VAM7	YGL212W	RPN14	P53196	417 aa		5.8	□□□□□ -1.48
VAM7	YGL212W	NAF1	P53919	492 aa	Known RBP	5.8	□□□□□ -1.48
VAM7	YGL212W	PEX25	Q02969	394 aa		5.8	□□□□□ -1.48
VAM7	YGL212W	PEX29	Q03370	554 aa		5.8	□□□□□ -1.48
VAM7	YGL212W	ARA2	Q04212	335 aa		5.8	□□□□□ -1.48
VAM7	YGL212W	LOT6	Q07923	191 aa		5.8	□□□□□ -1.48
VAM7	YGL212W	FLO1	P32768	1537 aa		5.79	□□□□□ -1.48
VAM7	YGL212W	ESS1	P22696	170 aa		5.79	□□□□□ -1.48
VAM7	YGL212W	MEI5	P32489	222 aa		5.79	□□□□□ -1.48
VAM7	YGL212W	CBF2	P32504	956 aa		5.79	□□□□□ -1.48
VAM7	YGL212W	BEM3	P32873	1128 aa		5.79	□□□□□ -1.48
VAM7	YGL212W	TIF3	P34167	436 aa	Known RBP	5.79	□□□□□ -1.48
VAM7	YGL212W	LOT5	P34234	306 aa		5.79	□□□□□ -1.48
VAM7	YGL212W	YKL023W	P36103	277 aa	Known RBP	5.79	□□□□□ -1.48
VAM7	YGL212W	ARL1	P38116	183 aa	Known RBP	5.79	□□□□□ -1.48
VAM7	YGL212W	UBP13	P38187	747 aa		5.79	□□□□□ -1.48
VAM7	YGL212W	PSY4	P38193	441 aa		5.79	□□□□□ -1.48
VAM7	YGL212W	SEC28	P40509	296 aa	Known RBP	5.79	□□□□□ -1.48
VAM7	YGL212W	HIS6	P40545	261 aa		5.79	□□□□□ -1.48
VAM7	YGL212W	ALG2	P43636	503 aa		5.79	□□□□□ -1.48
VAM7	YGL212W	MAD3	P47074	515 aa		5.79	□□□□□ -1.48
VAM7	YGL212W	UPF3	P48412	387 aa	Known RBP	5.79	□□□□□ -1.48
VAM7	YGL212W	SAP4	P53036	818 aa		5.79	□□□□□ -1.48
VAM7	YGL212W	CGR1	P53188	120 aa		5.79	□□□□□ -1.48
VAM7	YGL212W	YGR053C	P53234	283 aa		5.79	□□□□□ -1.48
VAM7	YGL212W	CAF120	P53836	1060 aa		5.79	□□□□□ -1.48
VAM7	YGL212W	SFI1	Q12369	946 aa		5.79	□□□□□ -1.48
VAM7	YGL212W	YML133C	Q03099	1374 aa		5.79	□□□□□ -1.48
VAM7	YGL212W	CCP1	P00431	361 aa		5.78	□□□□□ -1.48
VAM7	YGL212W	MIS1	P09440	975 aa	Known RBP	5.78	□□□□□ -1.48
VAM7	YGL212W	LAT1	P12695	482 aa	Known RBP	5.78	□□□□□ -1.48
VAM7	YGL212W	POL3	P15436	1097 aa		5.78	□□□□□ -1.48
VAM7	YGL212W	PMA2	P19657	947 aa		5.78	□□□□□ -1.48
VAM7	YGL212W	DMC1	P25453	334 aa		5.78	□□□□□ -1.48
VAM7	YGL212W	YJU2	P28320	278 aa	Predicted RBP	5.78	□□□□□ -1.48
VAM7	YGL212W	FUN30	P31380	1131 aa		5.78	□□□□□ -1.48
VAM7	YGL212W	YKL069W	P36088	180 aa		5.78	□□□□□ -1.48
VAM7	YGL212W	ATG14	P38270	344 aa		5.78	□□□□□ -1.48
VAM7	YGL212W	PET100	P38958	111 aa		5.78	□□□□□ -1.48
VAM7	YGL212W	SIT1	P39980	628 aa		5.78	□□□□□ -1.48
VAM7	YGL212W	TPA1	P40032	644 aa	Known RBP	5.78	□□□□□ -1.48
VAM7	YGL212W	YJL068C	P40363	299 aa		5.78	□□□□□ -1.48
VAM7	YGL212W	GSM1	P42950	618 aa		5.78	□□□□□ -1.48
VAM7	YGL212W	GCN20	P43535	752 aa	Known RBP	5.78	□□□□□ -1.48
VAM7	YGL212W	YAP1802	P53309	568 aa		5.78	□□□□□ -1.48
VAM7	YGL212W	CIK1	Q01649	594 aa		5.78	□□□□□ -1.48
VAM7	YGL212W	MAP1	Q01662	387 aa	Known RBP RIP-Chip data	5.78	□□□□□ -1.48	not detected
VAM7	YGL212W	ECM11	Q04110	302 aa		5.78	□□□□□ -1.48
VAM7	YGL212W	DAP1	Q12091	152 aa		5.78	□□□□□ -1.48
VAM7	YGL212W	AI4	P03878	556 aa		5.77	□□□□□ -1.49
VAM7	YGL212W	PRP6	P19735	899 aa	Predicted RBP	5.77	□□□□□ -1.49
VAM7	YGL212W	HCA4	P20448	770 aa	Known RBP	5.77	□□□□□ -1.49
VAM7	YGL212W	PWP1	P21304	576 aa	Known RBP	5.77	□□□□□ -1.49
VAM7	YGL212W	CBP3	P21560	335 aa		5.77	□□□□□ -1.49
VAM7	YGL212W	YJU3	P28321	313 aa		5.77	□□□□□ -1.49
VAM7	YGL212W	SMI1	P32566	505 aa		5.77	□□□□□ -1.49
VAM7	YGL212W	SPC29	P33419	253 aa		5.77	□□□□□ -1.49
VAM7	YGL212W	CUE2	P36075	443 aa	Known RBP	5.77	□□□□□ -1.49
VAM7	YGL212W	BAP2	P38084	609 aa		5.77	□□□□□ -1.49
VAM7	YGL212W	MAK5	P38112	773 aa	Predicted RBP	5.77	□□□□□ -1.49
VAM7	YGL212W	CCZ1	P38273	704 aa		5.77	□□□□□ -1.49
VAM7	YGL212W	RRM3	P38766	723 aa		5.77	□□□□□ -1.49
VAM7	YGL212W	STL1	P39932	569 aa		5.77	□□□□□ -1.49
VAM7	YGL212W	KAP123	P40069	1113 aa	Known RBP	5.77	□□□□□ -1.49
VAM7	YGL212W	TMN3	P40071	706 aa		5.77	□□□□□ -1.49
VAM7	YGL212W	MET18	P40469	1032 aa		5.77	□□□□□ -1.49
VAM7	YGL212W	YRB1	P41920	201 aa	Known RBP	5.77	□□□□□ -1.49
VAM7	YGL212W	SBE2	P42223	864 aa	Known RBP	5.77	□□□□□ -1.49
VAM7	YGL212W	LOC1	P43586	204 aa	Predicted RBP	5.77	□□□□□ -1.49
VAM7	YGL212W	VPS53	P47061	822 aa		5.77	□□□□□ -1.49
VAM7	YGL212W	LIA1	P47120	325 aa	Known RBP	5.77	□□□□□ -1.49
VAM7	YGL212W	DCP2	P53550	970 aa	Known RBP	5.77	□□□□□ -1.49
VAM7	YGL212W	NIS1	P53939	407 aa		5.77	□□□□□ -1.49
VAM7	YGL212W	DAK1	P54838	584 aa	Known RBP	5.77	□□□□□ -1.49
VAM7	YGL212W	MGR3	Q04472	501 aa		5.77	□□□□□ -1.49
VAM7	YGL212W	LCB5	Q06147	687 aa	Known RBP	5.77	□□□□□ -1.49
VAM7	YGL212W	OXR1	Q08952	273 aa		5.77	□□□□□ -1.49
VAM7	YGL212W	MCM16	Q12262	181 aa		5.77	□□□□□ -1.49
VAM7	YGL212W	AAC3	P18238	307 aa		5.76	□□□□□ -1.49
VAM7	YGL212W	GRR1	P24814	1151 aa		5.76	□□□□□ -1.49
VAM7	YGL212W	RPL8B	P29453	256 aa	Known RBP	5.76	□□□□□ -1.49
VAM7	YGL212W	MGM1	P32266	881 aa		5.76	□□□□□ -1.49
VAM7	YGL212W	HMX1	P32339	317 aa		5.76	□□□□□ -1.49
VAM7	YGL212W	DOA4	P32571	926 aa		5.76	□□□□□ -1.49
VAM7	YGL212W	YUH1	P35127	236 aa		5.76	□□□□□ -1.49
VAM7	YGL212W	UBP11	P36026	717 aa		5.76	□□□□□ -1.49
VAM7	YGL212W	POL12	P38121	705 aa	Predicted RBP	5.76	□□□□□ -1.49
VAM7	YGL212W	MSG5	P38590	489 aa		5.76	□□□□□ -1.49
VAM7	YGL212W	YHL008C	P38750	627 aa		5.76	□□□□□ -1.49

Retrieved 100 of 5,963 RNA–protein pairs in 18.2 ms