RNA–Protein interactions for RNA: YGL155W

CDC43, Transcript of Beta subunit of geranylgeranyltransferase type I, yeastyeast

Gene CDC43, Length 1,131 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC43YGL155W YSC83P32792 385 aa5.7□□□□□ -1.5
CDC43YGL155W YEL1P34225 687 aa5.7□□□□□ -1.5
CDC43YGL155W NDT80P38830 627 aa5.7□□□□□ -1.5
CDC43YGL155W UTP7P40055 554 aaKnown RBP5.7□□□□□ -1.5
CDC43YGL155W SMX2P40204 77 aaKnown RBP5.7□□□□□ -1.5
CDC43YGL155W NIT1P40447 199 aa5.7□□□□□ -1.5
CDC43YGL155W LCB2P40970 561 aa5.7□□□□□ -1.5
CDC43YGL155W EAF6P47128 113 aa5.7□□□□□ -1.5
CDC43YGL155W RIM8P53179 542 aa5.7□□□□□ -1.5
CDC43YGL155W SHR3Q02774 210 aa5.7□□□□□ -1.5
CDC43YGL155W USA1Q03714 838 aa5.7□□□□□ -1.5
CDC43YGL155W SPC24Q04477 213 aa5.7□□□□□ -1.5
CDC43YGL155W SVF1Q05515 481 aa5.7□□□□□ -1.5
CDC43YGL155W OPT2Q06593 877 aa5.7□□□□□ -1.5
CDC43YGL155W NOB1Q08444 459 aaKnown RBP5.7□□□□□ -1.5
CDC43YGL155W RAD18P10862 487 aa5.69□□□□□ -1.5
CDC43YGL155W GAL2P13181 574 aa5.69□□□□□ -1.5
CDC43YGL155W SRV2P17555 526 aaKnown RBP5.69□□□□□ -1.5
CDC43YGL155W NIP1P32497 812 aaKnown RBP5.69□□□□□ -1.5
CDC43YGL155W MUD1P32605 298 aaKnown RBP5.69□□□□□ -1.5
CDC43YGL155W YBL055CP34220 418 aaPredicted RBP5.69□□□□□ -1.5
CDC43YGL155W HEK2P38199 381 aaKnown RBP RIP-Chip data5.69□□□□□ -1.5not detected
CDC43YGL155W PHO88P38264 188 aaPredicted RBP5.69□□□□□ -1.5
CDC43YGL155W PMC1P38929 1173 aaPredicted RBP5.69□□□□□ -1.5
CDC43YGL155W RPL34BP40525 121 aaKnown RBP5.69□□□□□ -1.5
CDC43YGL155W NMD5P46970 1048 aa5.69□□□□□ -1.5
CDC43YGL155W BRO1P48582 844 aa5.69□□□□□ -1.5
CDC43YGL155W YGR111WP53265 400 aa5.69□□□□□ -1.5
CDC43YGL155W KIN4Q01919 800 aa5.69□□□□□ -1.5
CDC43YGL155W ADA2Q02336 434 aa5.69□□□□□ -1.5
CDC43YGL155W TRM44Q02648 567 aaKnown RBP5.69□□□□□ -1.5
CDC43YGL155W FAR8Q05040 523 aa5.69□□□□□ -1.5
CDC43YGL155W WHI4Q07655 649 aaKnown RBP5.69□□□□□ -1.5
CDC43YGL155W GUD1Q07729 489 aa5.69□□□□□ -1.5
CDC43YGL155W CMS1Q07897 291 aaKnown RBP5.69□□□□□ -1.5
CDC43YGL155W BDS1Q08347 646 aa5.69□□□□□ -1.5
CDC43YGL155W TY4A-HQ6Q5P6 413 aa5.69□□□□□ -1.5
CDC43YGL155W SPT2P06843 333 aaPredicted RBP5.68□□□□□ -1.5
CDC43YGL155W PEP5P12868 1029 aa5.68□□□□□ -1.5
CDC43YGL155W KRS1P15180 591 aaKnown RBP5.68□□□□□ -1.5
CDC43YGL155W GAL11P19659 1081 aa5.68□□□□□ -1.5
CDC43YGL155W PDB1P32473 366 aaKnown RBP5.68□□□□□ -1.5
CDC43YGL155W GCD6P32501 712 aaKnown RBP5.68□□□□□ -1.5
CDC43YGL155W COT1P32798 439 aa5.68□□□□□ -1.5
CDC43YGL155W PIN4P34217 668 aaKnown RBP RIP-Chip data5.68□□□□□ -1.5not detected
CDC43YGL155W SWH1P35845 1188 aa5.68□□□□□ -1.5
CDC43YGL155W UBP11P36026 717 aa5.68□□□□□ -1.5
CDC43YGL155W YKR018CP36114 725 aa5.68□□□□□ -1.5
CDC43YGL155W CCL1P37366 393 aa5.68□□□□□ -1.5
CDC43YGL155W NCL1P38205 684 aaKnown RBP5.68□□□□□ -1.5
CDC43YGL155W VHC1P38329 1120 aa5.68□□□□□ -1.5
CDC43YGL155W KEL1P38853 1164 aaKnown RBP5.68□□□□□ -1.5
CDC43YGL155W END3P39013 349 aa5.68□□□□□ -1.5
CDC43YGL155W ACA1P39970 489 aa5.68□□□□□ -1.5
CDC43YGL155W YJR098CP47139 656 aa5.68□□□□□ -1.5
CDC43YGL155W GTR1Q00582 310 aa5.68□□□□□ -1.5
CDC43YGL155W RPA49Q01080 415 aaPredicted RBP5.68□□□□□ -1.5
CDC43YGL155W PNP1Q05788 311 aa5.68□□□□□ -1.5
CDC43YGL155W CRD1Q07560 283 aa5.68□□□□□ -1.5
CDC43YGL155W SMC5Q08204 1093 aa5.68□□□□□ -1.5
CDC43YGL155W VHS3Q08438 674 aa5.68□□□□□ -1.5
CDC43YGL155W RPS3P05750 240 aaKnown RBP5.67□□□□□ -1.5
CDC43YGL155W ARG1P22768 420 aa5.67□□□□□ -1.5
CDC43YGL155W SSD1P24276 1250 aaKnown RBP RIP-Chip data5.67□□□□□ -1.5not detected
CDC43YGL155W PER1P25625 357 aa5.67□□□□□ -1.5
CDC43YGL155W RRN6P32786 894 aa5.67□□□□□ -1.5
CDC43YGL155W MRE11P32829 692 aa5.67□□□□□ -1.5
CDC43YGL155W PEP12P32854 288 aa5.67□□□□□ -1.5
CDC43YGL155W HEL1P36113 551 aa5.67□□□□□ -1.5
CDC43YGL155W POP4P38336 279 aa5.67□□□□□ -1.5
CDC43YGL155W HMF1P40037 129 aaKnown RBP5.67□□□□□ -1.5
CDC43YGL155W YMR134WP40207 237 aa5.67□□□□□ -1.5
CDC43YGL155W TDA10P42938 290 aa5.67□□□□□ -1.5
CDC43YGL155W ATG36P46983 293 aa5.67□□□□□ -1.5
CDC43YGL155W SHE10P53075 577 aa5.67□□□□□ -1.5
CDC43YGL155W MDR1P53258 950 aa5.67□□□□□ -1.5
CDC43YGL155W ARK1P53974 638 aa5.67□□□□□ -1.5
CDC43YGL155W PTA1Q01329 785 aaPredicted RBP5.67□□□□□ -1.5
CDC43YGL155W VPS16Q03308 798 aa5.67□□□□□ -1.5
CDC43YGL155W YML037CQ03703 340 aa5.67□□□□□ -1.5
CDC43YGL155W MSH6Q03834 1242 aa5.67□□□□□ -1.5
CDC43YGL155W OSW2Q12202 724 aa5.67□□□□□ -1.5
CDC43YGL155W PHR1P05066 565 aaKnown RBP RIP-Chip data5.66□□□□□ -1.5not detected
CDC43YGL155W CBP1P07252 654 aa5.66□□□□□ -1.5
CDC43YGL155W VMA4P22203 233 aaKnown RBP5.66□□□□□ -1.5
CDC43YGL155W SWI3P32591 825 aa5.66□□□□□ -1.5
CDC43YGL155W TGL1P34163 548 aa5.66□□□□□ -1.5
CDC43YGL155W CSG2P35206 410 aa5.66□□□□□ -1.5
CDC43YGL155W PBP2P38151 413 aaKnown RBP RIP-Chip data5.66□□□□□ -1.5not detected
CDC43YGL155W MSG5P38590 489 aa5.66□□□□□ -1.5
CDC43YGL155W NPP2P39997 493 aa5.66□□□□□ -1.5
CDC43YGL155W FTR1P40088 404 aa5.66□□□□□ -1.5
CDC43YGL155W VPS53P47061 822 aa5.66□□□□□ -1.5
CDC43YGL155W TAM41P53230 385 aa5.66□□□□□ -1.5
CDC43YGL155W SUB1P54000 292 aaKnown RBP5.66□□□□□ -1.5
CDC43YGL155W SHE9Q04172 456 aa5.66□□□□□ -1.5
CDC43YGL155W TMA64Q04600 565 aaKnown RBP5.66□□□□□ -1.5
CDC43YGL155W SPH1Q06160 661 aa5.66□□□□□ -1.5
CDC43YGL155W NOC3Q07896 663 aaPredicted RBP5.66□□□□□ -1.5
CDC43YGL155W CDC53Q12018 815 aaKnown RBP5.66□□□□□ -1.5
Retrieved 100 of 5,963 RNA–protein pairs in 14.8 ms