RNA–Protein interactions for RNA: YER094C

PUP3, Transcript of Beta 3 subunit of the 20S proteasome, yeastyeast

Gene PUP3, Length 618 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PUP3YER094C TIF1P10081 395 aaKnown RBP8.27□□□□□ -1.09
PUP3YER094C KAR3P17119 729 aa8.27□□□□□ -1.09
PUP3YER094C SDH2P21801 266 aa8.27□□□□□ -1.09
PUP3YER094C SCJ1P25303 377 aa8.27□□□□□ -1.09
PUP3YER094C VBA3P25594 458 aa8.27□□□□□ -1.09
PUP3YER094C CYS3P31373 394 aaKnown RBP8.27□□□□□ -1.09
PUP3YER094C SEG2P34250 1132 aa8.27□□□□□ -1.09
PUP3YER094C VBA5P36172 582 aa8.27□□□□□ -1.09
PUP3YER094C YEL075CP39972 122 aa8.27□□□□□ -1.09
PUP3YER094C YFL040WP43562 540 aa8.27□□□□□ -1.09
PUP3YER094C RPC17P47076 161 aa8.27□□□□□ -1.09
PUP3YER094C FOL2P51601 243 aaKnown RBP8.27□□□□□ -1.09
PUP3YER094C ATG16Q03818 150 aa8.27□□□□□ -1.09
PUP3YER094C TIF35Q04067 274 aaKnown RBP8.27□□□□□ -1.09
PUP3YER094C ERV41Q04651 352 aa8.27□□□□□ -1.09
PUP3YER094C ESC8Q08119 714 aa8.27□□□□□ -1.09
PUP3YER094C SDH5Q08230 162 aa8.27□□□□□ -1.09
PUP3YER094C YOR059CQ08448 450 aaKnown RBP8.27□□□□□ -1.09
PUP3YER094C REC8Q12188 680 aa8.27□□□□□ -1.09
PUP3YER094C UBR2Q07963 1872 aa8.26□□□□□ -1.09
PUP3YER094C JIP3O13555 125 aa8.26□□□□□ -1.09
PUP3YER094C YLR462WO13556 202 aa8.26□□□□□ -1.09
PUP3YER094C SAT4P25333 603 aaKnown RBP8.26□□□□□ -1.09
PUP3YER094C YMC2P38087 329 aa8.26□□□□□ -1.09
PUP3YER094C GRS1P38088 690 aaKnown RBP8.26□□□□□ -1.09
PUP3YER094C YHL049CP38722 271 aa8.26□□□□□ -1.09
PUP3YER094C LCP5P40079 357 aaPredicted RBP8.26□□□□□ -1.09
PUP3YER094C YER189WP40104 122 aa8.26□□□□□ -1.09
PUP3YER094C RPT2P40327 437 aaKnown RBP8.26□□□□□ -1.09
PUP3YER094C YFL064CP43540 174 aa8.26□□□□□ -1.09
PUP3YER094C MND1P53102 219 aa8.26□□□□□ -1.09
PUP3YER094C YGR035CP53222 116 aa8.26□□□□□ -1.09
PUP3YER094C SPC98P53540 846 aa8.26□□□□□ -1.09
PUP3YER094C STP1Q00947 519 aa8.26□□□□□ -1.09
PUP3YER094C ARO80Q04052 950 aa8.26□□□□□ -1.09
PUP3YER094C URH1Q04179 340 aa8.26□□□□□ -1.09
PUP3YER094C PUF3Q07807 879 aaKnown RBP RIP-Chip data8.26□□□□□ -1.09not detected
PUP3YER094C YBL111CQ3E7Y5 667 aa8.26□□□□□ -1.09
PUP3YER094C BI2P03873 423 aa8.25□□□□□ -1.09
PUP3YER094C BI4P03879 638 aa8.25□□□□□ -1.09
PUP3YER094C GAL80P04387 435 aa8.25□□□□□ -1.09
PUP3YER094C GAC1P28006 793 aa8.25□□□□□ -1.09
PUP3YER094C CNS1P33313 385 aa8.25□□□□□ -1.09
PUP3YER094C RRP1P35178 278 aaPredicted RBP8.25□□□□□ -1.09
PUP3YER094C SHE3P38272 425 aaKnown RBP8.25□□□□□ -1.09
PUP3YER094C QNS1P38795 714 aaKnown RBP8.25□□□□□ -1.09
PUP3YER094C CCT4P39078 528 aaKnown RBP8.25□□□□□ -1.09
PUP3YER094C XDJ1P39102 459 aa8.25□□□□□ -1.09
PUP3YER094C FIR1P40020 876 aa8.25□□□□□ -1.09
PUP3YER094C MUB1Q03162 620 aa8.25□□□□□ -1.09
PUP3YER094C SKY1Q03656 742 aa8.25□□□□□ -1.09
PUP3YER094C PKH2Q12236 1081 aaKnown RBP8.25□□□□□ -1.09
PUP3YER094C SPO21Q12411 609 aa8.25□□□□□ -1.09
PUP3YER094C BI3Q9ZZW7 517 aa8.25□□□□□ -1.09
PUP3YER094C TAO3P40468 2376 aa8.24□□□□□ -1.09
PUP3YER094C RPO26P20435 155 aa8.24□□□□□ -1.09
PUP3YER094C CAD1P24813 409 aaKnown RBP8.24□□□□□ -1.09
PUP3YER094C LRE1P25579 583 aaKnown RBP8.24□□□□□ -1.09
PUP3YER094C SEC1P30619 724 aaKnown RBP8.24□□□□□ -1.09
PUP3YER094C ABD1P32783 436 aaPredicted RBP8.24□□□□□ -1.09
PUP3YER094C FRE1P32791 686 aa8.24□□□□□ -1.09
PUP3YER094C KDX1P36005 433 aa8.24□□□□□ -1.09
PUP3YER094C CCL1P37366 393 aa8.24□□□□□ -1.09
PUP3YER094C POA1P38218 177 aa8.24□□□□□ -1.09
PUP3YER094C APM2P38700 605 aa8.24□□□□□ -1.09
PUP3YER094C TMN3P40071 706 aa8.24□□□□□ -1.09
PUP3YER094C SIP5P40210 489 aaKnown RBP8.24□□□□□ -1.09
PUP3YER094C PUS2P53167 370 aa8.24□□□□□ -1.09
PUP3YER094C NOG2P53742 486 aaKnown RBP8.24□□□□□ -1.09
PUP3YER094C VTI1Q04338 217 aa8.24□□□□□ -1.09
PUP3YER094C IVY1Q04934 453 aa8.24□□□□□ -1.09
PUP3YER094C YDR278CQ05612 105 aa8.24□□□□□ -1.09
PUP3YER094C PIB1Q06651 286 aa8.24□□□□□ -1.09
PUP3YER094C MDM38Q08179 573 aa8.24□□□□□ -1.09
PUP3YER094C TRE1Q08919 783 aa8.24□□□□□ -1.09
PUP3YER094C AIM41Q12032 185 aa8.24□□□□□ -1.09
PUP3YER094C EMP46Q12396 444 aa8.24□□□□□ -1.09
PUP3YER094C MSD1P15179 658 aaKnown RBP8.23□□□□□ -1.09
PUP3YER094C MRP4P32902 394 aa8.23□□□□□ -1.09
PUP3YER094C YBL055CP34220 418 aaPredicted RBP8.23□□□□□ -1.09
PUP3YER094C WHI3P34761 661 aaKnown RBP8.23□□□□□ -1.09
PUP3YER094C MRPL7P36519 292 aa8.23□□□□□ -1.09
PUP3YER094C YBL036CP38197 257 aa8.23□□□□□ -1.09
PUP3YER094C SLX1P38324 304 aa8.23□□□□□ -1.09
PUP3YER094C YHR202WP38887 602 aa8.23□□□□□ -1.09
PUP3YER094C ASG1P40467 964 aa8.23□□□□□ -1.09
PUP3YER094C SNZ3P43545 298 aa8.23□□□□□ -1.09
PUP3YER094C SNZ2P53824 298 aa8.23□□□□□ -1.09
PUP3YER094C UFO1Q04511 668 aa8.23□□□□□ -1.09
PUP3YER094C ECI1Q05871 280 aa8.23□□□□□ -1.09
PUP3YER094C HAP2P06774 265 aa8.22□□□□□ -1.09
PUP3YER094C ADE3P07245 946 aaKnown RBP8.22□□□□□ -1.09
PUP3YER094C PMS1P14242 873 aa8.22□□□□□ -1.09
PUP3YER094C ADK2P26364 225 aa8.22□□□□□ -1.09
PUP3YER094C BIO2P32451 375 aa8.22□□□□□ -1.09
PUP3YER094C APN2P38207 520 aa8.22□□□□□ -1.09
PUP3YER094C PCM1P38628 557 aaKnown RBP8.22□□□□□ -1.09
PUP3YER094C PMC1P38929 1173 aaPredicted RBP8.22□□□□□ -1.09
PUP3YER094C SAK1P38990 1142 aa8.22□□□□□ -1.09
PUP3YER094C DSE1P40077 573 aa8.22□□□□□ -1.09
Retrieved 100 of 5,963 RNA–protein pairs in 9 ms