RNA–Protein interactions for RNA: YDR499W

LCD1, Transcript of Essential protein required for the DNA integrity checkpoint pathways, yeastyeast

Gene LCD1, Length 2,244 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LCD1YDR499W YNL195CP40168 261 aa2.36□□□□□ -2.03
LCD1YDR499W MAL11P53048 616 aa2.36□□□□□ -2.03
LCD1YDR499W RIM13Q03792 727 aa2.36□□□□□ -2.03
LCD1YDR499W VPS34P22543 875 aa2.35□□□□□ -2.03
LCD1YDR499W GMH1P36125 273 aa2.35□□□□□ -2.03
LCD1YDR499W MUP3P38734 546 aa2.35□□□□□ -2.03
LCD1YDR499W DSS1P39112 969 aa2.35□□□□□ -2.03
LCD1YDR499W PAC2P39937 518 aa2.35□□□□□ -2.03
LCD1YDR499W REC102Q02721 264 aa2.35□□□□□ -2.03
LCD1YDR499W OSW1Q08692 278 aa2.35□□□□□ -2.03
LCD1YDR499W STE12P13574 688 aa2.34□□□□□ -2.03
LCD1YDR499W STI1P15705 589 aaKnown RBP RIP-Chip data2.34□□□□□ -2.03not detected
LCD1YDR499W RPA135P22138 1203 aaKnown RBP2.34□□□□□ -2.03
LCD1YDR499W MIH1P23748 554 aa2.34□□□□□ -2.03
LCD1YDR499W NOP9P47077 666 aaKnown RBP2.34□□□□□ -2.03
LCD1YDR499W SPC98P53540 846 aa2.34□□□□□ -2.03
LCD1YDR499W SNP1Q00916 300 aaPredicted RBP2.34□□□□□ -2.03
LCD1YDR499W YOR131CQ12486 218 aa2.34□□□□□ -2.03
LCD1YDR499W ERG11P10614 530 aa2.34□□□□□ -2.04
LCD1YDR499W PEX1P24004 1043 aa2.34□□□□□ -2.04
LCD1YDR499W TIM23P32897 222 aa2.34□□□□□ -2.04
LCD1YDR499W YGR151CP53287 111 aa2.34□□□□□ -2.04
LCD1YDR499W SEC5P89102 971 aa2.34□□□□□ -2.04
LCD1YDR499W LEE1Q02799 301 aaKnown RBP2.34□□□□□ -2.04
LCD1YDR499W FMP30Q02883 468 aa2.34□□□□□ -2.04
LCD1YDR499W KCC4P25389 1037 aa2.33□□□□□ -2.04
LCD1YDR499W VBA3P25594 458 aa2.33□□□□□ -2.04
LCD1YDR499W BCS1P32839 456 aa2.33□□□□□ -2.04
LCD1YDR499W KSP1P38691 1029 aaKnown RBP2.33□□□□□ -2.04
LCD1YDR499W CAF16P43569 289 aa2.33□□□□□ -2.04
LCD1YDR499W PCL10P53124 433 aa2.33□□□□□ -2.04
LCD1YDR499W ARP4P80428 489 aa2.33□□□□□ -2.04
LCD1YDR499W HMO1Q03973 246 aaKnown RBP2.33□□□□□ -2.04
LCD1YDR499W NHX1Q04121 633 aa2.33□□□□□ -2.04
LCD1YDR499W CLF1Q12309 687 aaPredicted RBP2.33□□□□□ -2.04
LCD1YDR499W MEF1P25039 761 aa2.33□□□□□ -2.04
LCD1YDR499W HSL7P38274 827 aa2.33□□□□□ -2.04
LCD1YDR499W YHR097CP38809 366 aaKnown RBP2.33□□□□□ -2.04
LCD1YDR499W CHZ1P40019 153 aaPredicted RBP2.33□□□□□ -2.04
LCD1YDR499W RSC8P43609 557 aaKnown RBP2.33□□□□□ -2.04
LCD1YDR499W MRK1P50873 501 aa2.33□□□□□ -2.04
LCD1YDR499W NMA2P53204 395 aa2.33□□□□□ -2.04
LCD1YDR499W THI22Q06490 572 aa2.33□□□□□ -2.04
LCD1YDR499W DIA2Q08496 732 aaPredicted RBP2.33□□□□□ -2.04
LCD1YDR499W SLK19Q08581 821 aaKnown RBP2.33□□□□□ -2.04
LCD1YDR499W NUP1P20676 1076 aa2.32□□□□□ -2.04
LCD1YDR499W YKR018CP36114 725 aa2.32□□□□□ -2.04
LCD1YDR499W PIG2P40187 538 aa2.32□□□□□ -2.04
LCD1YDR499W SEG1Q04279 960 aa2.32□□□□□ -2.04
LCD1YDR499W YDL086WQ07505 273 aa2.32□□□□□ -2.04
LCD1YDR499W MDM12Q92328 271 aa2.32□□□□□ -2.04
LCD1YDR499W CIT2P08679 460 aa2.32□□□□□ -2.04
LCD1YDR499W GSY1P23337 708 aa2.32□□□□□ -2.04
LCD1YDR499W SRP40P32583 406 aaPredicted RBP2.32□□□□□ -2.04
LCD1YDR499W BIT2P38346 545 aa2.32□□□□□ -2.04
LCD1YDR499W GAT1P43574 510 aa2.32□□□□□ -2.04
LCD1YDR499W CHS5Q12114 671 aaKnown RBP2.32□□□□□ -2.04
LCD1YDR499W LAM4P38800 1345 aa2.31□□□□□ -2.04
LCD1YDR499W RAD18P10862 487 aa2.31□□□□□ -2.04
LCD1YDR499W ABF1P14164 731 aa2.31□□□□□ -2.04
LCD1YDR499W PTP1P25044 335 aa2.31□□□□□ -2.04
LCD1YDR499W HOG1P32485 435 aa2.31□□□□□ -2.04
LCD1YDR499W YMC2P38087 329 aa2.31□□□□□ -2.04
LCD1YDR499W APN2P38207 520 aa2.31□□□□□ -2.04
LCD1YDR499W PMC1P38929 1173 aaPredicted RBP2.31□□□□□ -2.04
LCD1YDR499W MIT1P40002 666 aa2.31□□□□□ -2.04
LCD1YDR499W DOT6P40059 670 aaKnown RBP2.31□□□□□ -2.04
LCD1YDR499W GID8P40208 455 aa2.31□□□□□ -2.04
LCD1YDR499W XBP1P40489 647 aa2.31□□□□□ -2.04
LCD1YDR499W NNF1P47149 201 aa2.31□□□□□ -2.04
LCD1YDR499W PHO5P00635 467 aa2.3□□□□□ -2.04
LCD1YDR499W SRD1P09007 221 aa2.3□□□□□ -2.04
LCD1YDR499W SAT4P25333 603 aaKnown RBP2.3□□□□□ -2.04
LCD1YDR499W FEN2P25621 512 aaKnown RBP2.3□□□□□ -2.04
LCD1YDR499W YMC1P32331 307 aa2.3□□□□□ -2.04
LCD1YDR499W YKL091CP33324 310 aaKnown RBP2.3□□□□□ -2.04
LCD1YDR499W SET2P46995 733 aaKnown RBP2.3□□□□□ -2.04
LCD1YDR499W MPS3P47069 682 aa2.3□□□□□ -2.04
LCD1YDR499W RFX1P48743 811 aa2.3□□□□□ -2.04
LCD1YDR499W ASN1P49089 572 aaKnown RBP2.3□□□□□ -2.04
LCD1YDR499W BRE5P53741 515 aaKnown RBP2.3□□□□□ -2.04
LCD1YDR499W ISA1Q07821 250 aaPredicted RBP2.3□□□□□ -2.04
LCD1YDR499W YOL098CQ12496 1037 aa2.3□□□□□ -2.04
LCD1YDR499W ADE5,7P07244 802 aaKnown RBP2.3□□□□□ -2.04
LCD1YDR499W PRP28P23394 588 aa2.3□□□□□ -2.04
LCD1YDR499W MNN4P36044 1178 aa2.3□□□□□ -2.04
LCD1YDR499W PBP2P38151 413 aaKnown RBP RIP-Chip data2.3□□□□□ -2.04not detected
LCD1YDR499W YIL077CP40508 320 aa2.3□□□□□ -2.04
LCD1YDR499W AIM14P53109 570 aa2.3□□□□□ -2.04
LCD1YDR499W TAX4P47030 604 aa2.29□□□□□ -2.04
LCD1YDR499W NET1P47035 1189 aa2.29□□□□□ -2.04
LCD1YDR499W VPS36Q06696 566 aa2.29□□□□□ -2.04
LCD1YDR499W MDM20Q12387 796 aaKnown RBP2.29□□□□□ -2.04
LCD1YDR499W UGP1P32861 499 aaKnown RBP2.29□□□□□ -2.04
LCD1YDR499W KHA1P40309 873 aa2.29□□□□□ -2.04
LCD1YDR499W NUP82P40368 713 aa2.29□□□□□ -2.04
LCD1YDR499W PMT6P42934 759 aa2.29□□□□□ -2.04
LCD1YDR499W BNA3P47039 444 aaKnown RBP2.29□□□□□ -2.04
LCD1YDR499W PGK1P00560 416 aaKnown RBP2.28□□□□□ -2.04
LCD1YDR499W HMG1P12683 1054 aa2.28□□□□□ -2.04
Retrieved 100 of 5,963 RNA–protein pairs in 11.3 ms