RNA–Protein interactions for RNA: YDR440W

DOT1, Transcript of Nucleosomal histone H3-Lys79 methylase, yeast

Gene DOT1, Length 1,749 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
DOT1	YDR440W	KAR3	P17119	729 aa		7.01	□□□□□ -1.29
DOT1	YDR440W	VMA4	P22203	233 aa	Known RBP	7.01	□□□□□ -1.29
DOT1	YDR440W	SAT4	P25333	603 aa	Known RBP	7.01	□□□□□ -1.29
DOT1	YDR440W	VBA3	P25594	458 aa		7.01	□□□□□ -1.29
DOT1	YDR440W	FUB1	P25659	250 aa		7.01	□□□□□ -1.29
DOT1	YDR440W	CYS3	P31373	394 aa	Known RBP	7.01	□□□□□ -1.29
DOT1	YDR440W	EFB1	P32471	206 aa	Known RBP	7.01	□□□□□ -1.29
DOT1	YDR440W	GCG1	P32656	232 aa	Known RBP	7.01	□□□□□ -1.29
DOT1	YDR440W	MRP4	P32902	394 aa		7.01	□□□□□ -1.29
DOT1	YDR440W	VBA5	P36172	582 aa		7.01	□□□□□ -1.29
DOT1	YDR440W	TDA3	P38758	523 aa		7.01	□□□□□ -1.29
DOT1	YDR440W	RIM8	P53179	542 aa		7.01	□□□□□ -1.29
DOT1	YDR440W	JJJ1	P53863	590 aa		7.01	□□□□□ -1.29
DOT1	YDR440W	PIB1	Q06651	286 aa		7.01	□□□□□ -1.29
DOT1	YDR440W	ATG23	Q06671	453 aa		7.01	□□□□□ -1.29
DOT1	YDR440W	LAA1	P39526	2014 aa		7.01	□□□□□ -1.29
DOT1	YDR440W	TBS1	P38114	1094 aa		7.01	□□□□□ -1.29
DOT1	YDR440W	TMN3	P40071	706 aa		7.01	□□□□□ -1.29
DOT1	YDR440W	SLG1	P54867	378 aa		7.01	□□□□□ -1.29
DOT1	YDR440W	VTI1	Q04338	217 aa		7.01	□□□□□ -1.29
DOT1	YDR440W	MAG2	Q06436	670 aa	Known RBP	7.01	□□□□□ -1.29
DOT1	YDR440W	DNL4	Q08387	944 aa	Predicted RBP	7.01	□□□□□ -1.29
DOT1	YDR440W	NOP58	Q12499	511 aa	Known RBP	7.01	□□□□□ -1.29
DOT1	YDR440W	CIT2	P08679	460 aa		7	□□□□□ -1.29
DOT1	YDR440W	DBF4	P32325	704 aa		7	□□□□□ -1.29
DOT1	YDR440W	BYE1	P36106	594 aa		7	□□□□□ -1.29
DOT1	YDR440W	YBL036C	P38197	257 aa		7	□□□□□ -1.29
DOT1	YDR440W	CCT4	P39078	528 aa	Known RBP	7	□□□□□ -1.29
DOT1	YDR440W	GEM1	P39722	662 aa		7	□□□□□ -1.29
DOT1	YDR440W	POL31	P46957	487 aa		7	□□□□□ -1.29
DOT1	YDR440W	MND1	P53102	219 aa		7	□□□□□ -1.29
DOT1	YDR440W	YGR035C	P53222	116 aa		7	□□□□□ -1.29
DOT1	YDR440W	STP1	Q00947	519 aa		7	□□□□□ -1.29
DOT1	YDR440W	MZM1	Q03429	123 aa	Predicted RBP	7	□□□□□ -1.29
DOT1	YDR440W	ATG16	Q03818	150 aa		7	□□□□□ -1.29
DOT1	YDR440W	ECI1	Q05871	280 aa		7	□□□□□ -1.29
DOT1	YDR440W	TRE1	Q08919	783 aa		7	□□□□□ -1.29
DOT1	YDR440W	VPS54	Q12071	889 aa		7	□□□□□ -1.29
DOT1	YDR440W	EMP46	Q12396	444 aa		7	□□□□□ -1.29
DOT1	YDR440W	TPK1	P06244	397 aa		6.99	□□□□□ -1.29
DOT1	YDR440W	ADE3	P07245	946 aa	Known RBP	6.99	□□□□□ -1.29
DOT1	YDR440W	RPO26	P20435	155 aa		6.99	□□□□□ -1.29
DOT1	YDR440W	SDH2	P21801	266 aa		6.99	□□□□□ -1.29
DOT1	YDR440W	FRE1	P32791	686 aa		6.99	□□□□□ -1.29
DOT1	YDR440W	YBL055C	P34220	418 aa	Predicted RBP	6.99	□□□□□ -1.29
DOT1	YDR440W	ABZ1	P37254	787 aa	Predicted RBP	6.99	□□□□□ -1.29
DOT1	YDR440W	YMC2	P38087	329 aa		6.99	□□□□□ -1.29
DOT1	YDR440W	GRS1	P38088	690 aa	Known RBP	6.99	□□□□□ -1.29
DOT1	YDR440W	SLX1	P38324	304 aa		6.99	□□□□□ -1.29
DOT1	YDR440W	BRL1	P38770	471 aa		6.99	□□□□□ -1.29
DOT1	YDR440W	DSE1	P40077	573 aa		6.99	□□□□□ -1.29
DOT1	YDR440W	RPT2	P40327	437 aa	Known RBP	6.99	□□□□□ -1.29
DOT1	YDR440W	ESL1	P40456	1118 aa		6.99	□□□□□ -1.29
DOT1	YDR440W	ALT2	P52892	507 aa		6.99	□□□□□ -1.29
DOT1	YDR440W	YGR130C	P53278	816 aa		6.99	□□□□□ -1.29
DOT1	YDR440W	MUB1	Q03162	620 aa		6.99	□□□□□ -1.29
DOT1	YDR440W	RCR2	Q03446	210 aa	Known RBP	6.99	□□□□□ -1.29
DOT1	YDR440W	TDA9	Q04545	1251 aa		6.99	□□□□□ -1.29
DOT1	YDR440W	DIS3	Q08162	1001 aa	Known RBP	6.99	□□□□□ -1.29
DOT1	YDR440W	ZRT2	Q12436	422 aa		6.99	□□□□□ -1.29
DOT1	YDR440W	RAD10	P06838	210 aa		6.98	□□□□□ -1.29
DOT1	YDR440W	BUD2	P33314	1104 aa		6.98	□□□□□ -1.29
DOT1	YDR440W	RRP1	P35178	278 aa	Predicted RBP	6.98	□□□□□ -1.29
DOT1	YDR440W	NOP4	P37838	685 aa	Known RBP	6.98	□□□□□ -1.29
DOT1	YDR440W	POA1	P38218	177 aa		6.98	□□□□□ -1.29
DOT1	YDR440W	END3	P39013	349 aa		6.98	□□□□□ -1.29
DOT1	YDR440W	MAD1	P40957	749 aa		6.98	□□□□□ -1.29
DOT1	YDR440W	SNZ3	P43545	298 aa		6.98	□□□□□ -1.29
DOT1	YDR440W	NMD5	P46970	1048 aa		6.98	□□□□□ -1.29
DOT1	YDR440W	RPC17	P47076	161 aa		6.98	□□□□□ -1.29
DOT1	YDR440W	YJR054W	P47114	497 aa		6.98	□□□□□ -1.29
DOT1	YDR440W	SPC98	P53540	846 aa		6.98	□□□□□ -1.29
DOT1	YDR440W	NOG2	P53742	486 aa	Known RBP	6.98	□□□□□ -1.29
DOT1	YDR440W	SNZ2	P53824	298 aa		6.98	□□□□□ -1.29
DOT1	YDR440W	SPP1	Q03012	353 aa		6.98	□□□□□ -1.29
DOT1	YDR440W	YMR187C	Q03236	431 aa		6.98	□□□□□ -1.29
DOT1	YDR440W	UFO1	Q04511	668 aa		6.98	□□□□□ -1.29
DOT1	YDR440W	REC8	Q12188	680 aa		6.98	□□□□□ -1.29
DOT1	YDR440W	TIF1	P10081	395 aa	Known RBP	6.98	□□□□□ -1.29
DOT1	YDR440W	GCD6	P32501	712 aa	Known RBP	6.98	□□□□□ -1.29
DOT1	YDR440W	CNS1	P33313	385 aa		6.98	□□□□□ -1.29
DOT1	YDR440W	SPC72	P39723	622 aa		6.98	□□□□□ -1.29
DOT1	YDR440W	YNL320W	P42840	284 aa		6.98	□□□□□ -1.29
DOT1	YDR440W	FOL2	P51601	243 aa	Known RBP	6.98	□□□□□ -1.29
DOT1	YDR440W	HOP2	P53187	214 aa		6.98	□□□□□ -1.29
DOT1	YDR440W	NOP13	P53883	403 aa	Known RBP RIP-Chip data	6.98	□□□□□ -1.29	not detected
DOT1	YDR440W	YNL011C	P53980	444 aa		6.98	□□□□□ -1.29
DOT1	YDR440W	ARO80	Q04052	950 aa		6.98	□□□□□ -1.29
DOT1	YDR440W	NOP6	Q07623	225 aa	Known RBP	6.98	□□□□□ -1.29
DOT1	YDR440W	PUF3	Q07807	879 aa	Known RBP RIP-Chip data	6.98	□□□□□ -1.29	not detected
DOT1	YDR440W	AIM41	Q12032	185 aa		6.98	□□□□□ -1.29
DOT1	YDR440W	PKH2	Q12236	1081 aa	Known RBP	6.98	□□□□□ -1.29
DOT1	YDR440W	HO	P09932	586 aa		6.97	□□□□□ -1.29
DOT1	YDR440W	PRP9	P19736	530 aa	Known RBP	6.97	□□□□□ -1.29
DOT1	YDR440W	TRX1	P22217	103 aa	Known RBP	6.97	□□□□□ -1.29
DOT1	YDR440W	PUF4	P25339	888 aa	Known RBP RIP-Chip data	6.97	□□□□□ -1.29	not detected
DOT1	YDR440W	GAC1	P28006	793 aa		6.97	□□□□□ -1.29
DOT1	YDR440W	BIO2	P32451	375 aa		6.97	□□□□□ -1.29
DOT1	YDR440W	ABD1	P32783	436 aa	Predicted RBP	6.97	□□□□□ -1.29
DOT1	YDR440W	PEX2	P32800	271 aa		6.97	□□□□□ -1.29

Retrieved 100 of 5,963 RNA–protein pairs in 60.1 ms