RNA–Protein interactions for RNA: YCL051W

LRE1, Transcript of Protein involved in control of cell wall structure and stress response, yeast

Gene LRE1, Length 1,752 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
LRE1	YCL051W	UBC11	P52492	156 aa		2.2	□□□□□ -2.06
LRE1	YCL051W	PRP3	Q03338	469 aa	Predicted RBP	2.2	□□□□□ -2.06
LRE1	YCL051W	PKH1	Q03407	766 aa		2.2	□□□□□ -2.06
LRE1	YCL051W	OYE2	Q03558	400 aa	Known RBP	2.2	□□□□□ -2.06
LRE1	YCL051W	RPN7	Q06103	429 aa	Known RBP	2.2	□□□□□ -2.06
LRE1	YCL051W	TY1B-A	O13527	1196 aa	Known RBP	2.19	□□□□□ -2.06
LRE1	YCL051W	PGK1	P00560	416 aa	Known RBP	2.19	□□□□□ -2.06
LRE1	YCL051W	HIR1	P32479	840 aa		2.19	□□□□□ -2.06
LRE1	YCL051W	LTV1	P34078	463 aa		2.19	□□□□□ -2.06
LRE1	YCL051W	RRP14	P36080	434 aa	Known RBP	2.19	□□□□□ -2.06
LRE1	YCL051W	RSP5	P39940	809 aa	Known RBP	2.19	□□□□□ -2.06
LRE1	YCL051W	SMC3	P47037	1230 aa		2.19	□□□□□ -2.06
LRE1	YCL051W	NRG1	Q03125	231 aa		2.19	□□□□□ -2.06
LRE1	YCL051W	GIN4	Q12263	1142 aa		2.19	□□□□□ -2.06
LRE1	YCL051W	NOP58	Q12499	511 aa	Known RBP	2.19	□□□□□ -2.06
LRE1	YCL051W	SUP35	P05453	685 aa	Known RBP	2.18	□□□□□ -2.06
LRE1	YCL051W	DSN1	P40568	576 aa		2.18	□□□□□ -2.06
LRE1	YCL051W	CEP3	P40969	608 aa		2.18	□□□□□ -2.06
LRE1	YCL051W	YAP1802	P53309	568 aa		2.18	□□□□□ -2.06
LRE1	YCL051W	PAP2	P53632	584 aa	Known RBP	2.18	□□□□□ -2.06
LRE1	YCL051W	BMS1	Q08965	1183 aa	Known RBP	2.18	□□□□□ -2.06
LRE1	YCL051W	ERG11	P10614	530 aa		2.18	□□□□□ -2.06
LRE1	YCL051W	ROX1	P25042	368 aa		2.18	□□□□□ -2.06
LRE1	YCL051W	AGP1	P25376	633 aa		2.18	□□□□□ -2.06
LRE1	YCL051W	SBA1	P28707	216 aa	Known RBP	2.18	□□□□□ -2.06
LRE1	YCL051W	CBF5	P33322	483 aa	Known RBP RIP-Chip data	2.18	□□□□□ -2.06	not detected
LRE1	YCL051W	BDH2	P39713	417 aa		2.18	□□□□□ -2.06
LRE1	YCL051W	MRK1	P50873	501 aa		2.18	□□□□□ -2.06
LRE1	YCL051W	YPL068C	Q02749	293 aa		2.18	□□□□□ -2.06
LRE1	YCL051W	MUS81	Q04149	632 aa	Predicted RBP	2.18	□□□□□ -2.06
LRE1	YCL051W	SRB8	P25648	1427 aa		2.17	□□□□□ -2.06
LRE1	YCL051W	RFA1	P22336	621 aa	Known RBP	2.17	□□□□□ -2.06
LRE1	YCL051W	BYE1	P36106	594 aa		2.17	□□□□□ -2.06
LRE1	YCL051W	SAP190	P36123	1033 aa		2.17	□□□□□ -2.06
LRE1	YCL051W	GLG1	P36143	616 aa		2.17	□□□□□ -2.06
LRE1	YCL051W	SEC9	P40357	651 aa		2.17	□□□□□ -2.06
LRE1	YCL051W	DJP1	P40564	432 aa		2.17	□□□□□ -2.06
LRE1	YCL051W	RSC8	P43609	557 aa	Known RBP	2.17	□□□□□ -2.06
LRE1	YCL051W	TAN1	P53072	289 aa	Predicted RBP	2.17	□□□□□ -2.06
LRE1	YCL051W	GIS2	P53849	153 aa	Known RBP RIP-Chip data	2.17	□□□□□ -2.06	not detected
LRE1	YCL051W	NOP8	Q08287	484 aa	Predicted RBP	2.17	□□□□□ -2.06
LRE1	YCL051W	TGL5	Q12043	749 aa		2.17	□□□□□ -2.06
LRE1	YCL051W	PDR5	P33302	1511 aa	Known RBP	2.17	□□□□□ -2.06
LRE1	YCL051W	YLR415C	O13578	112 aa		2.16	□□□□□ -2.06
LRE1	YCL051W	PHR1	P05066	565 aa	Known RBP RIP-Chip data	2.16	□□□□□ -2.06	not detected
LRE1	YCL051W	SIR3	P06701	978 aa		2.16	□□□□□ -2.06
LRE1	YCL051W	CLN2	P20438	545 aa		2.16	□□□□□ -2.06
LRE1	YCL051W	URA1	P28272	314 aa	Predicted RBP	2.16	□□□□□ -2.06
LRE1	YCL051W	DEP1	P31385	405 aa		2.16	□□□□□ -2.06
LRE1	YCL051W	TYS1	P36421	394 aa	Known RBP	2.16	□□□□□ -2.06
LRE1	YCL051W	MED8	P38304	223 aa		2.16	□□□□□ -2.06
LRE1	YCL051W	PEA2	P40091	420 aa		2.16	□□□□□ -2.06
LRE1	YCL051W	FAA4	P47912	694 aa	Known RBP	2.16	□□□□□ -2.06
LRE1	YCL051W	GDE1	Q02979	1223 aa		2.16	□□□□□ -2.06
LRE1	YCL051W	YML020W	Q03722	664 aa		2.16	□□□□□ -2.06
LRE1	YCL051W	GCN2	P15442	1659 aa		2.16	□□□□□ -2.06
LRE1	YCL051W	ADE8	P04161	214 aa		2.15	□□□□□ -2.06
LRE1	YCL051W	PPH3	P32345	308 aa		2.15	□□□□□ -2.06
LRE1	YCL051W	NGG1	P32494	702 aa		2.15	□□□□□ -2.06
LRE1	YCL051W	BAP3	P41815	604 aa		2.15	□□□□□ -2.06
LRE1	YCL051W	CTR1	P49573	406 aa		2.15	□□□□□ -2.06
LRE1	YCL051W	UBC9	P50623	157 aa	Predicted RBP	2.15	□□□□□ -2.06
LRE1	YCL051W	VPS16	Q03308	798 aa		2.15	□□□□□ -2.06
LRE1	YCL051W	SHE9	Q04172	456 aa		2.15	□□□□□ -2.06
LRE1	YCL051W	YDR306C	Q06640	478 aa		2.15	□□□□□ -2.06
LRE1	YCL051W	APL5	Q08951	932 aa	Known RBP	2.15	□□□□□ -2.06
LRE1	YCL051W	ATG11	Q12527	1178 aa		2.15	□□□□□ -2.06
LRE1	YCL051W	BCK1	Q01389	1478 aa		2.15	□□□□□ -2.06
LRE1	YCL051W	NUP192	P47054	1683 aa		2.15	□□□□□ -2.07
LRE1	YCL051W	DAL5	P15365	543 aa		2.15	□□□□□ -2.07
LRE1	YCL051W	RAD51	P25454	400 aa		2.15	□□□□□ -2.07
LRE1	YCL051W	ECM1	P39715	212 aa		2.15	□□□□□ -2.07
LRE1	YCL051W	PZF1	P39933	429 aa		2.15	□□□□□ -2.07
LRE1	YCL051W	ARG2	P40360	574 aa		2.15	□□□□□ -2.07
LRE1	YCL051W	ATG36	P46983	293 aa		2.15	□□□□□ -2.07
LRE1	YCL051W	MPP10	P47083	593 aa	Known RBP	2.15	□□□□□ -2.07
LRE1	YCL051W	RSC1	P53236	928 aa		2.15	□□□□□ -2.07
LRE1	YCL051W	TPO2	P53283	614 aa		2.15	□□□□□ -2.07
LRE1	YCL051W	BUD21	Q08492	214 aa	Predicted RBP	2.15	□□□□□ -2.07
LRE1	YCL051W	SLK19	Q08581	821 aa	Known RBP	2.15	□□□□□ -2.07
LRE1	YCL051W	FAL1	Q12099	399 aa	Known RBP	2.15	□□□□□ -2.07
LRE1	YCL051W	PDR11	P40550	1411 aa		2.15	□□□□□ -2.07
LRE1	YCL051W	RRP5	Q05022	1729 aa	Known RBP	2.14	□□□□□ -2.07
LRE1	YCL051W	KRE5	P22023	1365 aa		2.14	□□□□□ -2.07
LRE1	YCL051W	PYC1	P11154	1178 aa	Known RBP	2.14	□□□□□ -2.07
LRE1	YCL051W	NOP1	P15646	327 aa	Known RBP	2.14	□□□□□ -2.07
LRE1	YCL051W	NUP1	P20676	1076 aa		2.14	□□□□□ -2.07
LRE1	YCL051W	VBA5	P36172	582 aa		2.14	□□□□□ -2.07
LRE1	YCL051W	ERT1	P38140	529 aa		2.14	□□□□□ -2.07
LRE1	YCL051W	AIM20	P40451	204 aa		2.14	□□□□□ -2.07
LRE1	YCL051W	PFA3	P42836	336 aa		2.14	□□□□□ -2.07
LRE1	YCL051W	DUS1	P53759	423 aa	Known RBP	2.14	□□□□□ -2.07
LRE1	YCL051W	BUL2	Q03758	920 aa	Known RBP	2.14	□□□□□ -2.07
LRE1	YCL051W	SRP54	P20424	541 aa	Known RBP	2.13	□□□□□ -2.07
LRE1	YCL051W	CLB1	P24868	471 aa		2.13	□□□□□ -2.07
LRE1	YCL051W	PUP2	P32379	260 aa		2.13	□□□□□ -2.07
LRE1	YCL051W	CDC11	P32458	415 aa		2.13	□□□□□ -2.07
LRE1	YCL051W	SCT1	P32784	759 aa		2.13	□□□□□ -2.07
LRE1	YCL051W	YRO2	P38079	344 aa		2.13	□□□□□ -2.07
LRE1	YCL051W	BRN1	P38170	754 aa		2.13	□□□□□ -2.07

Retrieved 100 of 5,963 RNA–protein pairs in 14 ms