RNA–Protein interactions for RNA: snR60

snR60, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR60, Length 104 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR60snR60 TAF8Q03750 510 aa2.54□□□□□ -2
snR60snR60 GLG1P36143 616 aa2.53□□□□□ -2
snR60snR60 LYS9P38999 446 aa2.53□□□□□ -2
snR60snR60 TY4A-JP47023 414 aa2.53□□□□□ -2
snR60snR60 MTR3P48240 250 aaPredicted RBP2.53□□□□□ -2
snR60snR60 CTR1P49573 406 aa2.53□□□□□ -2
snR60snR60 GLO1P50107 326 aa2.53□□□□□ -2
snR60snR60 MRK1P50873 501 aa2.53□□□□□ -2
snR60snR60 ATG4P53867 494 aa2.53□□□□□ -2
snR60snR60 GAD1Q04792 585 aa2.53□□□□□ -2
snR60snR60 CIT1P00890 479 aa2.52□□□□□ -2.01
snR60snR60 ARE1P25628 610 aa2.52□□□□□ -2.01
snR60snR60 ORC2P32833 620 aa2.52□□□□□ -2.01
snR60snR60 APL2P36000 726 aaPredicted RBP2.52□□□□□ -2.01
snR60snR60 SAP190P36123 1033 aa2.52□□□□□ -2.01
snR60snR60 FMO1P38866 432 aa2.52□□□□□ -2.01
snR60snR60 RLP7P40693 322 aaKnown RBP2.52□□□□□ -2.01
snR60snR60 ZDS1P50111 915 aaKnown RBP2.52□□□□□ -2.01
snR60snR60 PAN2P53010 1115 aaPredicted RBP2.52□□□□□ -2.01
snR60snR60 MTL1P53214 551 aa2.52□□□□□ -2.01
snR60snR60 SEC5P89102 971 aa2.52□□□□□ -2.01
snR60snR60 YDR514CQ04408 483 aa2.52□□□□□ -2.01
snR60snR60 HSP60P19882 572 aaKnown RBP2.51□□□□□ -2.01
snR60snR60 VPS34P22543 875 aa2.51□□□□□ -2.01
snR60snR60 YHR112CP38716 378 aa2.51□□□□□ -2.01
snR60snR60 HRB1P38922 454 aaKnown RBP RIP-Chip data2.51□□□□□ -2.01not detected
snR60snR60 NUP60P39705 539 aa2.51□□□□□ -2.01
snR60snR60 ALG2P43636 503 aa2.51□□□□□ -2.01
snR60snR60 ARG5,6Q01217 863 aa2.51□□□□□ -2.01
snR60snR60 CTK1Q03957 528 aaKnown RBP2.51□□□□□ -2.01
snR60snR60 SEG1Q04279 960 aa2.51□□□□□ -2.01
snR60snR60 MET7Q08645 548 aa2.51□□□□□ -2.01
snR60snR60 OSW1Q08692 278 aa2.51□□□□□ -2.01
snR60snR60 OSH2Q12451 1283 aa2.51□□□□□ -2.01
snR60snR60 ADE2P21264 571 aaKnown RBP2.5□□□□□ -2.01
snR60snR60 SPC29P33419 253 aa2.5□□□□□ -2.01
snR60snR60 PHO11P35842 467 aa2.5□□□□□ -2.01
snR60snR60 BET3P36149 193 aa2.5□□□□□ -2.01
snR60snR60 TRZ1P36159 838 aaPredicted RBP2.5□□□□□ -2.01
snR60snR60 PHO12P38693 467 aa2.5□□□□□ -2.01
snR60snR60 YHR020WP38708 688 aaKnown RBP2.5□□□□□ -2.01
snR60snR60 SFB3P38810 929 aa2.5□□□□□ -2.01
snR60snR60 BNA3P47039 444 aaKnown RBP2.5□□□□□ -2.01
snR60snR60 PRP31P49704 494 aaPredicted RBP2.5□□□□□ -2.01
snR60snR60 HMO1Q03973 246 aaKnown RBP2.5□□□□□ -2.01
snR60snR60 YDR338CQ05497 695 aa2.5□□□□□ -2.01
snR60snR60 MCM21Q06675 368 aa2.5□□□□□ -2.01
snR60snR60 YDL124WQ07551 312 aaKnown RBP2.5□□□□□ -2.01
snR60snR60 MLH3Q12083 715 aa2.5□□□□□ -2.01
snR60snR60 WRS1Q12109 432 aaKnown RBP2.5□□□□□ -2.01
snR60snR60 HRP1Q99383 534 aaKnown RBP2.5□□□□□ -2.01
snR60snR60 DIF1O13577 133 aa2.49□□□□□ -2.01
snR60snR60 PHR1P05066 565 aaKnown RBP RIP-Chip data2.49□□□□□ -2.01not detected
snR60snR60 HOM2P13663 365 aaKnown RBP2.49□□□□□ -2.01
snR60snR60 RAD4P14736 754 aa2.49□□□□□ -2.01
snR60snR60 PAM1P37304 830 aaKnown RBP2.49□□□□□ -2.01
snR60snR60 LTP1P40347 161 aa2.49□□□□□ -2.01
snR60snR60 HUL4P40985 892 aa2.49□□□□□ -2.01
snR60snR60 UBC9P50623 157 aaPredicted RBP2.49□□□□□ -2.01
snR60snR60 YBP2P53169 641 aa2.49□□□□□ -2.01
snR60snR60 SNU71P53207 620 aaKnown RBP2.49□□□□□ -2.01
snR60snR60 RIM13Q03792 727 aa2.49□□□□□ -2.01
snR60snR60 RGC1Q06108 1083 aaKnown RBP2.49□□□□□ -2.01
snR60snR60 TOM70P07213 617 aaKnown RBP2.48□□□□□ -2.01
snR60snR60 THR1P17423 357 aaKnown RBP2.48□□□□□ -2.01
snR60snR60 ERG6P25087 383 aaKnown RBP2.48□□□□□ -2.01
snR60snR60 YUR1P26725 428 aa2.48□□□□□ -2.01
snR60snR60 MVD1P32377 396 aaKnown RBP2.48□□□□□ -2.01
snR60snR60 MUP3P38734 546 aa2.48□□□□□ -2.01
snR60snR60 MIP6P38760 659 aaKnown RBP2.48□□□□□ -2.01
snR60snR60 GID8P40208 455 aa2.48□□□□□ -2.01
snR60snR60 SHR5P41912 237 aa2.48□□□□□ -2.01
snR60snR60 YGR125WP53273 1036 aa2.48□□□□□ -2.01
snR60snR60 CLF1Q12309 687 aaPredicted RBP2.48□□□□□ -2.01
snR60snR60 FUB1P25659 250 aa2.47□□□□□ -2.01
snR60snR60 CCR4P31384 837 aaKnown RBP2.47□□□□□ -2.01
snR60snR60 BNA2P47125 453 aa2.47□□□□□ -2.01
snR60snR60 RTA1P53047 317 aa2.47□□□□□ -2.01
snR60snR60 FLC1Q08967 793 aa2.47□□□□□ -2.01
snR60snR60 YLR149CQ99296 730 aa2.47□□□□□ -2.01
snR60snR60 PGK1P00560 416 aaKnown RBP2.46□□□□□ -2.02
snR60snR60 CAN1P04817 590 aa2.46□□□□□ -2.02
snR60snR60 PEX1P24004 1043 aa2.46□□□□□ -2.02
snR60snR60 SEC6P32844 805 aa2.46□□□□□ -2.02
snR60snR60 SET3P36124 751 aa2.46□□□□□ -2.02
snR60snR60 GMH1P36125 273 aa2.46□□□□□ -2.02
snR60snR60 CRP1P38845 465 aaKnown RBP2.46□□□□□ -2.02
snR60snR60 GET2P40056 285 aa2.46□□□□□ -2.02
snR60snR60 GAT1P43574 510 aa2.46□□□□□ -2.02
snR60snR60 YJL049WP47048 450 aa2.46□□□□□ -2.02
snR60snR60 SLK19Q08581 821 aaKnown RBP2.46□□□□□ -2.02
snR60snR60 ZRT2Q12436 422 aa2.46□□□□□ -2.02
snR60snR60 PER1P25625 357 aa2.45□□□□□ -2.02
snR60snR60 MTC2P34246 357 aa2.45□□□□□ -2.02
snR60snR60 APT2P36973 181 aa2.45□□□□□ -2.02
snR60snR60 YMC2P38087 329 aa2.45□□□□□ -2.02
snR60snR60 RSP5P39940 809 aaKnown RBP2.45□□□□□ -2.02
snR60snR60 ALY2P47029 1046 aa2.45□□□□□ -2.02
snR60snR60 TIM54P47045 478 aa2.45□□□□□ -2.02
snR60snR60 ORC4P54791 529 aa2.45□□□□□ -2.02
Retrieved 100 of 5,963 RNA–protein pairs in 123.9 ms