RNA–Protein interactions for RNA: snR35

snR35, Transcript of H/ACA box small nucleolar RNA (snoRNA), yeastyeast

Gene snR35, Length 204 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR35snR35 GCN5Q03330 439 aa3.83□□□□□ -1.8
snR35snR35 ROT1Q03691 256 aa3.83□□□□□ -1.8
snR35snR35 YHM2Q04013 314 aa3.83□□□□□ -1.8
snR35snR35 WHI4Q07655 649 aaKnown RBP3.83□□□□□ -1.8
snR35snR35 GPR1Q12361 961 aa3.83□□□□□ -1.8
snR35snR35 DFG16Q99234 619 aa3.83□□□□□ -1.8
snR35snR35 SST2P11972 698 aaKnown RBP3.82□□□□□ -1.8
snR35snR35 EMC1P25574 760 aa3.82□□□□□ -1.8
snR35snR35 HEM12P32347 362 aaPredicted RBP3.82□□□□□ -1.8
snR35snR35 YKR075CP36155 307 aa3.82□□□□□ -1.8
snR35snR35 OMA1P36163 345 aa3.82□□□□□ -1.8
snR35snR35 POL12P38121 705 aaPredicted RBP3.82□□□□□ -1.8
snR35snR35 ECM1P39715 212 aa3.82□□□□□ -1.8
snR35snR35 DAS1P47005 663 aa3.82□□□□□ -1.8
snR35snR35 INP52P50942 1183 aa3.82□□□□□ -1.8
snR35snR35 SLD3P53135 668 aa3.82□□□□□ -1.8
snR35snR35 ARP4P80428 489 aa3.82□□□□□ -1.8
snR35snR35 VMS1Q04311 632 aaKnown RBP3.82□□□□□ -1.8
snR35snR35 PHM6Q05637 104 aa3.82□□□□□ -1.8
snR35snR35 RGA2Q06407 1009 aa3.82□□□□□ -1.8
snR35snR35 ACK1Q07622 623 aaPredicted RBP3.82□□□□□ -1.8
snR35snR35 PEX15Q08215 383 aa3.82□□□□□ -1.8
snR35snR35 YPR027CQ12079 277 aa3.82□□□□□ -1.8
snR35snR35 SWM1Q12379 170 aa3.82□□□□□ -1.8
snR35snR35 COX11P19516 300 aaKnown RBP3.81□□□□□ -1.8
snR35snR35 PWP2P25635 923 aaKnown RBP3.81□□□□□ -1.8
snR35snR35 SEC65P29478 273 aa3.81□□□□□ -1.8
snR35snR35 SIC1P38634 284 aa3.81□□□□□ -1.8
snR35snR35 SAK1P38990 1142 aa3.81□□□□□ -1.8
snR35snR35 GID8P40208 455 aa3.81□□□□□ -1.8
snR35snR35 PFA3P42836 336 aa3.81□□□□□ -1.8
snR35snR35 SET2P46995 733 aaKnown RBP3.81□□□□□ -1.8
snR35snR35 RNR4P49723 345 aaKnown RBP3.81□□□□□ -1.8
snR35snR35 SPC105P53148 917 aa3.81□□□□□ -1.8
snR35snR35 YBP2P53169 641 aa3.81□□□□□ -1.8
snR35snR35 BRE5P53741 515 aaKnown RBP3.81□□□□□ -1.8
snR35snR35 MUS81Q04149 632 aaPredicted RBP3.81□□□□□ -1.8
snR35snR35 NYV1Q12255 253 aa3.81□□□□□ -1.8
snR35snR35 NPC2Q12408 173 aa3.81□□□□□ -1.8
snR35snR35 RPS21BQ3E754 87 aaKnown RBP3.81□□□□□ -1.8
snR35snR35 YLR415CO13578 112 aa3.8□□□□□ -1.8
snR35snR35 TUB3P09734 445 aaKnown RBP3.8□□□□□ -1.8
snR35snR35 RPS21AP0C0V8 87 aaKnown RBP3.8□□□□□ -1.8
snR35snR35 CDC20P26309 610 aa3.8□□□□□ -1.8
snR35snR35 SEC21P32074 935 aaKnown RBP3.8□□□□□ -1.8
snR35snR35 DAL3P32459 195 aa3.8□□□□□ -1.8
snR35snR35 HIR1P32479 840 aa3.8□□□□□ -1.8
snR35snR35 NIC96P34077 839 aa3.8□□□□□ -1.8
snR35snR35 VPS24P36095 224 aaKnown RBP3.8□□□□□ -1.8
snR35snR35 AKL1P38080 1108 aaKnown RBP3.8□□□□□ -1.8
snR35snR35 APN2P38207 520 aa3.8□□□□□ -1.8
snR35snR35 YBR259WP38338 688 aa3.8□□□□□ -1.8
snR35snR35 GCV2P49095 1034 aa3.8□□□□□ -1.8
snR35snR35 PKH1Q03407 766 aa3.8□□□□□ -1.8
snR35snR35 YAP6Q03935 383 aa3.8□□□□□ -1.8
snR35snR35 MCM21Q06675 368 aa3.8□□□□□ -1.8
snR35snR35 MPD2Q99316 277 aa3.8□□□□□ -1.8
snR35snR35 SOD2P00447 233 aa3.79□□□□□ -1.8
snR35snR35 APL2P36000 726 aaPredicted RBP3.79□□□□□ -1.8
snR35snR35 YKL133CP36066 463 aa3.79□□□□□ -1.8
snR35snR35 VHR1P40522 640 aa3.79□□□□□ -1.8
snR35snR35 ENP2P48234 707 aaKnown RBP3.79□□□□□ -1.8
snR35snR35 PIP2P52960 996 aa3.79□□□□□ -1.8
snR35snR35 PAP2P53632 584 aaKnown RBP3.79□□□□□ -1.8
snR35snR35 MET14Q02196 202 aa3.79□□□□□ -1.8
snR35snR35 CEF1Q03654 590 aaPredicted RBP3.79□□□□□ -1.8
snR35snR35 RRP6Q12149 733 aaKnown RBP3.79□□□□□ -1.8
snR35snR35 NOP56Q12460 504 aaKnown RBP RIP-Chip data3.79□□□□□ -1.8not detected
snR35snR35 TRM11Q12463 433 aa3.79□□□□□ -1.8
snR35snR35 KCS1Q12494 1050 aa3.79□□□□□ -1.8
snR35snR35 DPB3P27344 201 aa3.78□□□□□ -1.8
snR35snR35 PTP2P29461 750 aa3.78□□□□□ -1.8
snR35snR35 SER1P33330 395 aaKnown RBP3.78□□□□□ -1.8
snR35snR35 LRG1P35688 1017 aa3.78□□□□□ -1.8
snR35snR35 APT2P36973 181 aa3.78□□□□□ -1.8
snR35snR35 FAT1P38225 669 aa3.78□□□□□ -1.8
snR35snR35 YHR202WP38887 602 aa3.78□□□□□ -1.8
snR35snR35 RSC8P43609 557 aaKnown RBP3.78□□□□□ -1.8
snR35snR35 PRP31P49704 494 aaPredicted RBP3.78□□□□□ -1.8
snR35snR35 SPT20P50875 604 aa3.78□□□□□ -1.8
snR35snR35 RIM8P53179 542 aa3.78□□□□□ -1.8
snR35snR35 HOL1P53389 586 aa3.78□□□□□ -1.8
snR35snR35 NOP15P53927 220 aaPredicted RBP3.78□□□□□ -1.8
snR35snR35 UBX4P54730 416 aa3.78□□□□□ -1.8
snR35snR35 ARG5,6Q01217 863 aa3.78□□□□□ -1.8
snR35snR35 REC102Q02721 264 aa3.78□□□□□ -1.8
snR35snR35 YMR210WQ03649 449 aa3.78□□□□□ -1.8
snR35snR35 ASM4Q05166 528 aa3.78□□□□□ -1.8
snR35snR35 YLR224WQ05947 369 aa3.78□□□□□ -1.8
snR35snR35 MLC2Q06580 163 aa3.78□□□□□ -1.8
snR35snR35 PEX19Q07418 342 aa3.78□□□□□ -1.8
snR35snR35 RPS17AP02407 136 aaKnown RBP3.77□□□□□ -1.81
snR35snR35 RPS13P05756 151 aaKnown RBP3.77□□□□□ -1.81
snR35snR35 RPS17BP14127 136 aaKnown RBP3.77□□□□□ -1.81
snR35snR35 YEF3P16521 1044 aaKnown RBP3.77□□□□□ -1.81
snR35snR35 PRP4P20053 465 aaKnown RBP3.77□□□□□ -1.81
snR35snR35 HCA4P20448 770 aaKnown RBP3.77□□□□□ -1.81
snR35snR35 STE11P23561 717 aa3.77□□□□□ -1.81
snR35snR35 KCC4P25389 1037 aa3.77□□□□□ -1.81
snR35snR35 YKU70P32807 602 aa3.77□□□□□ -1.81
Retrieved 100 of 5,963 RNA–protein pairs in 227.3 ms