RNA–Protein interactions for RNA: YOL022C

TSR4, Cytoplasmic protein required for correct processing of 20S pre-rRNA, yeast

Gene TSR4, Length 1,227 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TSR4	YOL022C	MTR3	P48240	250 aa	Predicted RBP	4.3	□□□□□ -1.72
TSR4	YOL022C	TEX1	P53851	422 aa	Known RBP	4.3	□□□□□ -1.72
TSR4	YOL022C	IRC13	Q08630	104 aa		4.3	□□□□□ -1.72
TSR4	YOL022C	YGR161W-C	Q3E744	92 aa		4.3	□□□□□ -1.72
TSR4	YOL022C	TSR4	P25040	408 aa		4.29	□□□□□ -1.72
TSR4	YOL022C	MSH2	P25847	964 aa		4.29	□□□□□ -1.72
TSR4	YOL022C	STO1	P34160	861 aa	Known RBP	4.29	□□□□□ -1.72
TSR4	YOL022C	MTH1	P35198	433 aa		4.29	□□□□□ -1.72
TSR4	YOL022C	YBR259W	P38338	688 aa		4.29	□□□□□ -1.72
TSR4	YOL022C	YHL017W	P38745	532 aa		4.29	□□□□□ -1.72
TSR4	YOL022C	ECM1	P39715	212 aa		4.29	□□□□□ -1.72
TSR4	YOL022C	SDS3	P40505	327 aa		4.29	□□□□□ -1.72
TSR4	YOL022C	BAP3	P41815	604 aa		4.29	□□□□□ -1.72
TSR4	YOL022C	BNA2	P47125	453 aa		4.29	□□□□□ -1.72
TSR4	YOL022C	GND2	P53319	492 aa		4.29	□□□□□ -1.72
TSR4	YOL022C	DNM1	P54861	757 aa		4.29	□□□□□ -1.72
TSR4	YOL022C	CRR1	Q05790	422 aa		4.29	□□□□□ -1.72
TSR4	YOL022C	IRC10	Q08118	586 aa		4.29	□□□□□ -1.72
TSR4	YOL022C	ATG11	Q12527	1178 aa		4.29	□□□□□ -1.72
TSR4	YOL022C	GRX4	P32642	244 aa		4.28	□□□□□ -1.72
TSR4	YOL022C	BCD1	P38772	366 aa		4.28	□□□□□ -1.72
TSR4	YOL022C	DAS1	P47005	663 aa		4.28	□□□□□ -1.72
TSR4	YOL022C	SNP1	Q00916	300 aa	Predicted RBP	4.28	□□□□□ -1.72
TSR4	YOL022C	NOP14	Q99207	810 aa	Known RBP	4.28	□□□□□ -1.72
TSR4	YOL022C	GSY1	P23337	708 aa		4.27	□□□□□ -1.73
TSR4	YOL022C	VBA3	P25594	458 aa		4.27	□□□□□ -1.73
TSR4	YOL022C	YGL081W	P53156	320 aa		4.27	□□□□□ -1.73
TSR4	YOL022C	TIM44	Q01852	431 aa		4.27	□□□□□ -1.73
TSR4	YOL022C	NTG2	Q08214	380 aa		4.27	□□□□□ -1.73
TSR4	YOL022C	Q0142	Q9ZZW4	58 aa		4.27	□□□□□ -1.73
TSR4	YOL022C	SRD1	P09007	221 aa		4.26	□□□□□ -1.73
TSR4	YOL022C	ADE2	P21264	571 aa	Known RBP	4.26	□□□□□ -1.73
TSR4	YOL022C	MIP6	P38760	659 aa	Known RBP	4.26	□□□□□ -1.73
TSR4	YOL022C	LYS9	P38999	446 aa		4.26	□□□□□ -1.73
TSR4	YOL022C	DSS1	P39112	969 aa		4.26	□□□□□ -1.73
TSR4	YOL022C	UBP12	P39538	1254 aa		4.26	□□□□□ -1.73
TSR4	YOL022C	UBC11	P52492	156 aa		4.26	□□□□□ -1.73
TSR4	YOL022C	UGO1	Q03327	502 aa		4.26	□□□□□ -1.73
TSR4	YOL022C	HBT1	Q07653	1046 aa	Known RBP	4.26	□□□□□ -1.73
TSR4	YOL022C	SIR3	P06701	978 aa		4.25	□□□□□ -1.73
TSR4	YOL022C	RPL8A	P17076	256 aa	Known RBP	4.25	□□□□□ -1.73
TSR4	YOL022C	HIR1	P32479	840 aa		4.25	□□□□□ -1.73
TSR4	YOL022C	YKR051W	P36142	418 aa		4.25	□□□□□ -1.73
TSR4	YOL022C	YHR112C	P38716	378 aa		4.25	□□□□□ -1.73
TSR4	YOL022C	RPN10	P38886	268 aa	Known RBP	4.25	□□□□□ -1.73
TSR4	YOL022C	FMP52	P40008	231 aa		4.25	□□□□□ -1.73
TSR4	YOL022C	PRP31	P49704	494 aa	Predicted RBP	4.25	□□□□□ -1.73
TSR4	YOL022C	RIA1	P53893	1110 aa		4.25	□□□□□ -1.73
TSR4	YOL022C	ARG5,6	Q01217	863 aa		4.25	□□□□□ -1.73
TSR4	YOL022C	GAD1	Q04792	585 aa		4.25	□□□□□ -1.73
TSR4	YOL022C	SGO1	Q08490	590 aa		4.25	□□□□□ -1.73
TSR4	YOL022C	MSL5	Q12186	476 aa	Known RBP RIP-Chip data	4.25	□□□□□ -1.73	not detected
TSR4	YOL022C	ADR1	P07248	1323 aa		4.24	□□□□□ -1.73
TSR4	YOL022C	SSB1	P11484	613 aa	Known RBP	4.24	□□□□□ -1.73
TSR4	YOL022C	HOG1	P32485	435 aa		4.24	□□□□□ -1.73
TSR4	YOL022C	PEX6	P33760	1030 aa		4.24	□□□□□ -1.73
TSR4	YOL022C	APL2	P36000	726 aa	Predicted RBP	4.24	□□□□□ -1.73
TSR4	YOL022C	PCL5	P38794	229 aa		4.24	□□□□□ -1.73
TSR4	YOL022C	CRP1	P38845	465 aa	Known RBP	4.24	□□□□□ -1.73
TSR4	YOL022C	SSB2	P40150	613 aa	Known RBP	4.24	□□□□□ -1.73
TSR4	YOL022C	GID8	P40208	455 aa		4.24	□□□□□ -1.73
TSR4	YOL022C	STU2	P46675	888 aa		4.24	□□□□□ -1.73
TSR4	YOL022C	TEL2	P53038	688 aa		4.24	□□□□□ -1.73
TSR4	YOL022C	YBP2	P53169	641 aa		4.24	□□□□□ -1.73
TSR4	YOL022C	HMO1	Q03973	246 aa	Known RBP	4.24	□□□□□ -1.73
TSR4	YOL022C	ERG6	P25087	383 aa	Known RBP	4.23	□□□□□ -1.73
TSR4	YOL022C	TOM20	P35180	183 aa		4.23	□□□□□ -1.73
TSR4	YOL022C	YKR018C	P36114	725 aa		4.23	□□□□□ -1.73
TSR4	YOL022C	YFL052W	P43551	465 aa		4.23	□□□□□ -1.73
TSR4	YOL022C	NPY1	P53164	384 aa		4.23	□□□□□ -1.73
TSR4	YOL022C	MTL1	P53214	551 aa		4.23	□□□□□ -1.73
TSR4	YOL022C	YNR029C	P53729	429 aa	Known RBP	4.23	□□□□□ -1.73
TSR4	YOL022C	ARP4	P80428	489 aa		4.23	□□□□□ -1.73
TSR4	YOL022C	TFB2	Q02939	513 aa		4.23	□□□□□ -1.73
TSR4	YOL022C	NHX1	Q04121	633 aa		4.23	□□□□□ -1.73
TSR4	YOL022C	RGC1	Q06108	1083 aa	Known RBP	4.23	□□□□□ -1.73
TSR4	YOL022C	MCM21	Q06675	368 aa		4.23	□□□□□ -1.73
TSR4	YOL022C	MRH1	Q12117	320 aa	Predicted RBP	4.23	□□□□□ -1.73
TSR4	YOL022C	SUT2	Q12286	268 aa		4.23	□□□□□ -1.73
TSR4	YOL022C	HRP1	Q99383	534 aa	Known RBP	4.23	□□□□□ -1.73
TSR4	YOL022C	PCL2	P25693	308 aa		4.22	□□□□□ -1.73
TSR4	YOL022C	HIS7	P33734	552 aa	Known RBP	4.22	□□□□□ -1.73
TSR4	YOL022C	YPT53	P36019	220 aa		4.22	□□□□□ -1.73
TSR4	YOL022C	HSL7	P38274	827 aa		4.22	□□□□□ -1.73
TSR4	YOL022C	FMO1	P38866	432 aa		4.22	□□□□□ -1.73
TSR4	YOL022C	CCT3	P39077	534 aa	Known RBP	4.22	□□□□□ -1.73
TSR4	YOL022C	YEN1	P40028	759 aa		4.22	□□□□□ -1.73
TSR4	YOL022C	ORC4	P54791	529 aa		4.22	□□□□□ -1.73
TSR4	YOL022C	RPN7	Q06103	429 aa	Known RBP	4.22	□□□□□ -1.73
TSR4	YOL022C	RAD18	P10862	487 aa		4.21	□□□□□ -1.74
TSR4	YOL022C	HMG1	P12683	1054 aa		4.21	□□□□□ -1.74
TSR4	YOL022C	SFP1	P32432	683 aa		4.21	□□□□□ -1.74
TSR4	YOL022C	YEL1	P34225	687 aa		4.21	□□□□□ -1.74
TSR4	YOL022C	HRB1	P38922	454 aa	Known RBP RIP-Chip data	4.21	□□□□□ -1.74	not detected
TSR4	YOL022C	GET2	P40056	285 aa		4.21	□□□□□ -1.74
TSR4	YOL022C	UBC9	P50623	157 aa	Predicted RBP	4.21	□□□□□ -1.74
TSR4	YOL022C	PCL10	P53124	433 aa		4.21	□□□□□ -1.74
TSR4	YOL022C	SMX3	P54999	86 aa	Predicted RBP	4.21	□□□□□ -1.74
TSR4	YOL022C	LEE1	Q02799	301 aa	Known RBP	4.21	□□□□□ -1.74
TSR4	YOL022C	COG8	Q04632	607 aa		4.21	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 79.2 ms