RNA–Protein interactions for RNA: YNL138W-A

YSF3, Transcript of Component of the SF3b subcomplex of the U2 snRNP, yeastyeast

Gene YSF3, Length 258 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YSF3YNL138W-A MET6P05694 767 aaKnown RBP4.72□□□□□ -1.65
YSF3YNL138W-A YCL002CP25565 263 aa4.72□□□□□ -1.65
YSF3YNL138W-A SPC29P33419 253 aa4.72□□□□□ -1.65
YSF3YNL138W-A TAD1P53065 400 aa4.72□□□□□ -1.65
YSF3YNL138W-A DAM1P53267 343 aa4.72□□□□□ -1.65
YSF3YNL138W-A ALG12P53730 551 aa4.72□□□□□ -1.65
YSF3YNL138W-A YKR011CQ02209 353 aa4.72□□□□□ -1.65
YSF3YNL138W-A TMA10Q06177 86 aa4.72□□□□□ -1.65
YSF3YNL138W-A NOP12Q08208 459 aaKnown RBP4.72□□□□□ -1.65
YSF3YNL138W-A MET7Q08645 548 aa4.72□□□□□ -1.65
YSF3YNL138W-A YLR358CO13565 187 aa4.71□□□□□ -1.66
YSF3YNL138W-A PER1P25625 357 aa4.71□□□□□ -1.66
YSF3YNL138W-A TYE7P33122 291 aaPredicted RBP4.71□□□□□ -1.66
YSF3YNL138W-A LST4P34239 828 aa4.71□□□□□ -1.66
YSF3YNL138W-A FLR1P38124 548 aa4.71□□□□□ -1.66
YSF3YNL138W-A URM1P40554 99 aaPredicted RBP4.71□□□□□ -1.66
YSF3YNL138W-A TY4A-JP47023 414 aa4.71□□□□□ -1.66
YSF3YNL138W-A LRS4Q04087 347 aaKnown RBP4.71□□□□□ -1.66
YSF3YNL138W-A YDR514CQ04408 483 aa4.71□□□□□ -1.66
YSF3YNL138W-A UPC2Q12151 913 aa4.71□□□□□ -1.66
YSF3YNL138W-A APC1P53886 1748 aa4.7□□□□□ -1.66
YSF3YNL138W-A MEF1P25039 761 aa4.7□□□□□ -1.66
YSF3YNL138W-A MSH2P25847 964 aa4.7□□□□□ -1.66
YSF3YNL138W-A CYS3P31373 394 aaKnown RBP4.7□□□□□ -1.66
YSF3YNL138W-A ATG19P35193 415 aa4.7□□□□□ -1.66
YSF3YNL138W-A YKR075CP36155 307 aa4.7□□□□□ -1.66
YSF3YNL138W-A NCS6P53088 359 aa4.7□□□□□ -1.66
YSF3YNL138W-A NOG2P53742 486 aaKnown RBP4.7□□□□□ -1.66
YSF3YNL138W-A ATP25Q03153 612 aa4.7□□□□□ -1.66
YSF3YNL138W-A FBP1P09201 348 aa4.69□□□□□ -1.66
YSF3YNL138W-A SED4P25365 1065 aa4.69□□□□□ -1.66
YSF3YNL138W-A STE14P32584 239 aa4.69□□□□□ -1.66
YSF3YNL138W-A RRP14P36080 434 aaKnown RBP4.69□□□□□ -1.66
YSF3YNL138W-A DSS1P39112 969 aa4.69□□□□□ -1.66
YSF3YNL138W-A TAF1P46677 1066 aa4.69□□□□□ -1.66
YSF3YNL138W-A JSN1P47135 1091 aaKnown RBP RIP-Chip data4.69□□□□□ -1.66not detected
YSF3YNL138W-A PUS2P53167 370 aa4.69□□□□□ -1.66
YSF3YNL138W-A CLU1Q03690 1277 aaKnown RBP4.69□□□□□ -1.66
YSF3YNL138W-A YOR022CQ12204 715 aa4.69□□□□□ -1.66
YSF3YNL138W-A NPC2Q12408 173 aa4.69□□□□□ -1.66
YSF3YNL138W-A KCS1Q12494 1050 aa4.69□□□□□ -1.66
YSF3YNL138W-A POM152P39685 1337 aa4.69□□□□□ -1.66
YSF3YNL138W-A CDC9P04819 755 aa4.68□□□□□ -1.66
YSF3YNL138W-A RPP2AP05319 106 aaKnown RBP4.68□□□□□ -1.66
YSF3YNL138W-A NMD2P38798 1089 aaKnown RBP4.68□□□□□ -1.66
YSF3YNL138W-A MCM6P53091 1017 aaKnown RBP4.68□□□□□ -1.66
YSF3YNL138W-A POB3Q04636 552 aaKnown RBP4.68□□□□□ -1.66
YSF3YNL138W-A RSC3Q06639 885 aa4.68□□□□□ -1.66
YSF3YNL138W-A REH1Q06709 432 aa4.68□□□□□ -1.66
YSF3YNL138W-A ESC8Q08119 714 aa4.68□□□□□ -1.66
YSF3YNL138W-A HAL9Q12180 1030 aa4.68□□□□□ -1.66
YSF3YNL138W-A MDM12Q92328 271 aa4.68□□□□□ -1.66
YSF3YNL138W-A YEF3P16521 1044 aaKnown RBP4.67□□□□□ -1.66
YSF3YNL138W-A VBA3P25594 458 aa4.67□□□□□ -1.66
YSF3YNL138W-A PEX6P33760 1030 aa4.67□□□□□ -1.66
YSF3YNL138W-A SAP190P36123 1033 aa4.67□□□□□ -1.66
YSF3YNL138W-A MPT5P39016 859 aaKnown RBP RIP-Chip data4.67□□□□□ -1.66not detected
YSF3YNL138W-A SDP1P40479 209 aa4.67□□□□□ -1.66
YSF3YNL138W-A NTG2Q08214 380 aa4.67□□□□□ -1.66
YSF3YNL138W-A YRF1-4O13559 1382 aa4.66□□□□□ -1.66
YSF3YNL138W-A YIL177CP40434 1758 aa4.66□□□□□ -1.66
YSF3YNL138W-A YJL225CP40889 1758 aa4.66□□□□□ -1.66
YSF3YNL138W-A RIM15P43565 1770 aa4.66□□□□□ -1.66
YSF3YNL138W-A PRC1P00729 532 aa4.66□□□□□ -1.66
YSF3YNL138W-A MTC2P34246 357 aa4.66□□□□□ -1.66
YSF3YNL138W-A CTF8P38877 133 aa4.66□□□□□ -1.66
YSF3YNL138W-A HXT16P47185 567 aa4.66□□□□□ -1.66
YSF3YNL138W-A MNN10P50108 393 aaKnown RBP4.66□□□□□ -1.66
YSF3YNL138W-A SPT7P35177 1332 aa4.66□□□□□ -1.66
YSF3YNL138W-A YLR278CQ05854 1341 aa4.66□□□□□ -1.66
YSF3YNL138W-A GSY1P23337 708 aa4.65□□□□□ -1.67
YSF3YNL138W-A CTS1P29029 562 aa4.65□□□□□ -1.67
YSF3YNL138W-A SEC21P32074 935 aaKnown RBP4.65□□□□□ -1.67
YSF3YNL138W-A SHM2P37291 469 aaKnown RBP4.65□□□□□ -1.67
YSF3YNL138W-A YHR078WP38799 552 aa4.65□□□□□ -1.67
YSF3YNL138W-A UGO1Q03327 502 aa4.65□□□□□ -1.67
YSF3YNL138W-A YBR182C-AQ8TGU6 64 aa4.65□□□□□ -1.67
YSF3YNL138W-A MHP1P43638 1398 aa4.65□□□□□ -1.67
YSF3YNL138W-A STE11P23561 717 aa4.64□□□□□ -1.67
YSF3YNL138W-A KAR4P25583 335 aa4.64□□□□□ -1.67
YSF3YNL138W-A YKL133CP36066 463 aa4.64□□□□□ -1.67
YSF3YNL138W-A SET5P38890 526 aaKnown RBP4.64□□□□□ -1.67
YSF3YNL138W-A MSS4P38994 779 aa4.64□□□□□ -1.67
YSF3YNL138W-A MNN1P39106 762 aa4.64□□□□□ -1.67
YSF3YNL138W-A GIP4P39732 760 aa4.64□□□□□ -1.67
YSF3YNL138W-A RLP7P40693 322 aaKnown RBP4.64□□□□□ -1.67
YSF3YNL138W-A SHR5P41912 237 aa4.64□□□□□ -1.67
YSF3YNL138W-A ALY2P47029 1046 aa4.64□□□□□ -1.67
YSF3YNL138W-A EXG2P52911 562 aa4.64□□□□□ -1.67
YSF3YNL138W-A KIN4Q01919 800 aa4.64□□□□□ -1.67
YSF3YNL138W-A SLU7Q02775 382 aaKnown RBP4.64□□□□□ -1.67
YSF3YNL138W-A DIF1O13577 133 aa4.63□□□□□ -1.67
YSF3YNL138W-A CTT1P06115 562 aa4.63□□□□□ -1.67
YSF3YNL138W-A CAD1P24813 409 aaKnown RBP4.63□□□□□ -1.67
YSF3YNL138W-A STO1P34160 861 aaKnown RBP4.63□□□□□ -1.67
YSF3YNL138W-A MCD4P36051 919 aa4.63□□□□□ -1.67
YSF3YNL138W-A PHO23P50947 330 aa4.63□□□□□ -1.67
YSF3YNL138W-A CRR1Q05790 422 aa4.63□□□□□ -1.67
YSF3YNL138W-A LAS17Q12446 633 aa4.63□□□□□ -1.67
YSF3YNL138W-A SRD1P09007 221 aa4.62□□□□□ -1.67
Retrieved 100 of 5,963 RNA–protein pairs in 14.7 ms