RNA–Protein interactions for RNA: YMR298W

LIP1, Transcript of Ceramide synthase subunit, yeastyeast

Gene LIP1, Length 453 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LIP1YMR298W RCK2P38623 610 aa10.15□□□□□ -0.78
LIP1YMR298W ETP1P38748 585 aaKnown RBP10.15□□□□□ -0.78
LIP1YMR298W TDA3P38758 523 aa10.15□□□□□ -0.78
LIP1YMR298W SPC72P39723 622 aa10.15□□□□□ -0.78
LIP1YMR298W TRS130Q03660 1102 aa10.15□□□□□ -0.78
LIP1YMR298W NUR1Q12066 484 aa10.15□□□□□ -0.78
LIP1YMR298W RMP1Q12530 201 aa10.15□□□□□ -0.78
LIP1YMR298W CDC11P32458 415 aa10.14□□□□□ -0.79
LIP1YMR298W BCK2P33306 851 aa10.14□□□□□ -0.79
LIP1YMR298W MRX3P38172 270 aa10.14□□□□□ -0.79
LIP1YMR298W YTA12P40341 825 aa10.14□□□□□ -0.79
LIP1YMR298W DAS1P47005 663 aa10.14□□□□□ -0.79
LIP1YMR298W MNP1P53163 194 aaPredicted RBP10.14□□□□□ -0.79
LIP1YMR298W DIG1Q03063 452 aaKnown RBP10.14□□□□□ -0.79
LIP1YMR298W STE20Q03497 939 aaKnown RBP10.14□□□□□ -0.79
LIP1YMR298W CEF1Q03654 590 aaPredicted RBP10.14□□□□□ -0.79
LIP1YMR298W PPM1Q04081 328 aa10.14□□□□□ -0.79
LIP1YMR298W VTI1Q04338 217 aa10.14□□□□□ -0.79
LIP1YMR298W NOP6Q07623 225 aaKnown RBP10.14□□□□□ -0.79
LIP1YMR298W MPC54Q08550 464 aa10.14□□□□□ -0.79
LIP1YMR298W ZRT2Q12436 422 aa10.14□□□□□ -0.79
LIP1YMR298W RPS3P05750 240 aaKnown RBP10.13□□□□□ -0.79
LIP1YMR298W SPT2P06843 333 aaPredicted RBP10.13□□□□□ -0.79
LIP1YMR298W CDC42P19073 191 aa10.13□□□□□ -0.79
LIP1YMR298W AFT1P22149 690 aa10.13□□□□□ -0.79
LIP1YMR298W DAL2P25335 343 aa10.13□□□□□ -0.79
LIP1YMR298W CBF2P32504 956 aa10.13□□□□□ -0.79
LIP1YMR298W GCG1P32656 232 aaKnown RBP10.13□□□□□ -0.79
LIP1YMR298W KSP1P38691 1029 aaKnown RBP10.13□□□□□ -0.79
LIP1YMR298W RPC17P47076 161 aa10.13□□□□□ -0.79
LIP1YMR298W ICL2Q12031 575 aa10.13□□□□□ -0.79
LIP1YMR298W CDC8P00572 216 aa10.12□□□□□ -0.79
LIP1YMR298W WHI2P12611 486 aa10.12□□□□□ -0.79
LIP1YMR298W SNA3P14359 133 aa10.12□□□□□ -0.79
LIP1YMR298W COX11P19516 300 aaKnown RBP10.12□□□□□ -0.79
LIP1YMR298W IME1P21190 360 aa10.12□□□□□ -0.79
LIP1YMR298W HIS2P38635 335 aa10.12□□□□□ -0.79
LIP1YMR298W YGR111WP53265 400 aa10.12□□□□□ -0.79
LIP1YMR298W EEB1Q02891 456 aa10.12□□□□□ -0.79
LIP1YMR298W MSC2Q03455 724 aa10.12□□□□□ -0.79
LIP1YMR298W URH1Q04179 340 aa10.12□□□□□ -0.79
LIP1YMR298W ECI1Q05871 280 aa10.12□□□□□ -0.79
LIP1YMR298W SHS1Q07657 551 aa10.12□□□□□ -0.79
LIP1YMR298W SGT2Q12118 346 aaKnown RBP10.12□□□□□ -0.79
LIP1YMR298W AI5_BETAQ9ZZX0 354 aa10.12□□□□□ -0.79
LIP1YMR298W DYS1P38791 387 aa10.11□□□□□ -0.79
LIP1YMR298W CIN4P39110 191 aa10.11□□□□□ -0.79
LIP1YMR298W PHO86P46956 311 aa10.11□□□□□ -0.79
LIP1YMR298W DRN1P53255 507 aaKnown RBP10.11□□□□□ -0.79
LIP1YMR298W TPO2P53283 614 aa10.11□□□□□ -0.79
LIP1YMR298W ERV41Q04651 352 aa10.11□□□□□ -0.79
LIP1YMR298W ATG11Q12527 1178 aa10.11□□□□□ -0.79
LIP1YMR298W YKL068W-AQ3E826 78 aa10.11□□□□□ -0.79
LIP1YMR298W YLR462WO13556 202 aa10.1□□□□□ -0.79
LIP1YMR298W RNR1P21524 888 aaKnown RBP10.1□□□□□ -0.79
LIP1YMR298W SCJ1P25303 377 aa10.1□□□□□ -0.79
LIP1YMR298W OLA1P38219 394 aaKnown RBP10.1□□□□□ -0.79
LIP1YMR298W YHL049CP38722 271 aa10.1□□□□□ -0.79
LIP1YMR298W YEL075CP39972 122 aa10.1□□□□□ -0.79
LIP1YMR298W YER189WP40104 122 aa10.1□□□□□ -0.79
LIP1YMR298W SBE2P42223 864 aaKnown RBP10.1□□□□□ -0.79
LIP1YMR298W YFL064CP43540 174 aa10.1□□□□□ -0.79
LIP1YMR298W ATG16Q03818 150 aa10.1□□□□□ -0.79
LIP1YMR298W PUF3Q07807 879 aaKnown RBP RIP-Chip data10.1□□□□□ -0.79not detected
LIP1YMR298W ABP140Q08641 628 aaKnown RBP10.1□□□□□ -0.79
LIP1YMR298W APL5Q08951 932 aaKnown RBP10.1□□□□□ -0.79
LIP1YMR298W SPO21Q12411 609 aa10.1□□□□□ -0.79
LIP1YMR298W YBL111CQ3E7Y5 667 aa10.1□□□□□ -0.79
LIP1YMR298W ECM3Q99252 613 aa10.1□□□□□ -0.79
LIP1YMR298W ASP3-2P0CX77 362 aa10.09□□□□□ -0.79
LIP1YMR298W ASP3-3P0CX78 362 aa10.09□□□□□ -0.79
LIP1YMR298W ASP3-4P0CX79 362 aa10.09□□□□□ -0.79
LIP1YMR298W ASP3-1P0CZ17 362 aa10.09□□□□□ -0.79
LIP1YMR298W MSS51P32335 436 aa10.09□□□□□ -0.79
LIP1YMR298W RRN6P32786 894 aa10.09□□□□□ -0.79
LIP1YMR298W TRM2P33753 639 aa10.09□□□□□ -0.79
LIP1YMR298W NCL1P38205 684 aaKnown RBP10.09□□□□□ -0.79
LIP1YMR298W RRT2P38332 387 aa10.09□□□□□ -0.79
LIP1YMR298W DMA1P38823 416 aa10.09□□□□□ -0.79
LIP1YMR298W LCP5P40079 357 aaPredicted RBP10.09□□□□□ -0.79
LIP1YMR298W MVP1P40959 511 aaKnown RBP10.09□□□□□ -0.79
LIP1YMR298W SKP2P42843 763 aa10.09□□□□□ -0.79
LIP1YMR298W MIC19P43594 170 aa10.09□□□□□ -0.79
LIP1YMR298W BRO1P48582 844 aa10.09□□□□□ -0.79
LIP1YMR298W CUS1Q02554 436 aaPredicted RBP10.09□□□□□ -0.79
LIP1YMR298W YDR222WQ04925 415 aa10.09□□□□□ -0.79
LIP1YMR298W RIO1Q12196 484 aaKnown RBP10.09□□□□□ -0.79
LIP1YMR298W ZPS1Q12512 249 aa10.09□□□□□ -0.79
LIP1YMR298W YER152CP10356 443 aa10.08□□□□□ -0.8
LIP1YMR298W RRT12P25381 491 aa10.08□□□□□ -0.8
LIP1YMR298W SPT5P27692 1063 aaKnown RBP10.08□□□□□ -0.8
LIP1YMR298W DBF4P32325 704 aa10.08□□□□□ -0.8
LIP1YMR298W UBC6P33296 250 aaPredicted RBP10.08□□□□□ -0.8
LIP1YMR298W MUD2P36084 527 aaKnown RBP10.08□□□□□ -0.8
LIP1YMR298W SAK1P38990 1142 aa10.08□□□□□ -0.8
LIP1YMR298W DAK1P54838 584 aaKnown RBP10.08□□□□□ -0.8
LIP1YMR298W AIM41Q12032 185 aa10.08□□□□□ -0.8
LIP1YMR298W SRF1Q12516 437 aa10.08□□□□□ -0.8
LIP1YMR298W VRP1P37370 817 aa10.07□□□□□ -0.8
LIP1YMR298W KAP123P40069 1113 aaKnown RBP10.07□□□□□ -0.8
Retrieved 100 of 5,963 RNA–protein pairs in 12.9 ms