RNA–Protein interactions for RNA: YLR421C

RPN13, Transcript of Subunit of the 19S regulatory particle of the 26S proteasome lid, yeastyeast

Gene RPN13, Length 471 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPN13YLR421C YBR259WP38338 688 aa4.43□□□□□ -1.7
RPN13YLR421C YJL206CP39529 758 aa4.43□□□□□ -1.7
RPN13YLR421C NOP2P40991 618 aaKnown RBP4.43□□□□□ -1.7
RPN13YLR421C RTA1P53047 317 aa4.43□□□□□ -1.7
RPN13YLR421C SMX3P54999 86 aaPredicted RBP4.43□□□□□ -1.7
RPN13YLR421C GAD1Q04792 585 aa4.43□□□□□ -1.7
RPN13YLR421C ARO10Q06408 635 aa4.43□□□□□ -1.7
RPN13YLR421C DMC1P25453 334 aa4.42□□□□□ -1.7
RPN13YLR421C CCT7P42943 550 aaKnown RBP4.42□□□□□ -1.7
RPN13YLR421C HXT16P47185 567 aa4.42□□□□□ -1.7
RPN13YLR421C ZDS1P50111 915 aaKnown RBP4.42□□□□□ -1.7
RPN13YLR421C ATP25Q03153 612 aa4.42□□□□□ -1.7
RPN13YLR421C SPC29P33419 253 aa4.41□□□□□ -1.7
RPN13YLR421C REV7P38927 245 aa4.41□□□□□ -1.7
RPN13YLR421C BAP3P41815 604 aa4.41□□□□□ -1.7
RPN13YLR421C HUL5P53119 910 aa4.41□□□□□ -1.7
RPN13YLR421C RSP5P39940 809 aaKnown RBP4.4□□□□□ -1.71
RPN13YLR421C NDC80P40460 691 aa4.4□□□□□ -1.71
RPN13YLR421C TY4A-JP47023 414 aa4.4□□□□□ -1.71
RPN13YLR421C PRP31P49704 494 aaPredicted RBP4.4□□□□□ -1.71
RPN13YLR421C YBP2P53169 641 aa4.4□□□□□ -1.71
RPN13YLR421C MTL1P53214 551 aa4.4□□□□□ -1.71
RPN13YLR421C YAP1802P53309 568 aa4.4□□□□□ -1.71
RPN13YLR421C YDR338CQ05497 695 aa4.4□□□□□ -1.71
RPN13YLR421C COQ11Q05892 277 aa4.4□□□□□ -1.71
RPN13YLR421C FPR4Q06205 392 aaPredicted RBP4.4□□□□□ -1.71
RPN13YLR421C YNL162W-AQ3E7A8 72 aa4.4□□□□□ -1.71
RPN13YLR421C CAN1P04817 590 aa4.39□□□□□ -1.71
RPN13YLR421C ILV6P25605 309 aaKnown RBP4.39□□□□□ -1.71
RPN13YLR421C EMP70P32802 667 aa4.39□□□□□ -1.71
RPN13YLR421C SFB3P38810 929 aa4.39□□□□□ -1.71
RPN13YLR421C CCT3P39077 534 aaKnown RBP4.39□□□□□ -1.71
RPN13YLR421C ALY2P47029 1046 aa4.39□□□□□ -1.71
RPN13YLR421C NNF1P47149 201 aa4.39□□□□□ -1.71
RPN13YLR421C PAN2P53010 1115 aaPredicted RBP4.39□□□□□ -1.71
RPN13YLR421C THI7Q05998 598 aa4.39□□□□□ -1.71
RPN13YLR421C TAF3Q12297 353 aa4.39□□□□□ -1.71
RPN13YLR421C SIR3P06701 978 aa4.38□□□□□ -1.71
RPN13YLR421C SPO11P23179 398 aa4.38□□□□□ -1.71
RPN13YLR421C MVD1P32377 396 aaKnown RBP4.38□□□□□ -1.71
RPN13YLR421C YKL033W-AQ86ZR7 236 aa4.38□□□□□ -1.71
RPN13YLR421C PYC1P11154 1178 aaKnown RBP4.37□□□□□ -1.71
RPN13YLR421C ADE2P21264 571 aaKnown RBP4.37□□□□□ -1.71
RPN13YLR421C BRN1P38170 754 aa4.37□□□□□ -1.71
RPN13YLR421C YHR112CP38716 378 aa4.37□□□□□ -1.71
RPN13YLR421C FMO1P38866 432 aa4.37□□□□□ -1.71
RPN13YLR421C LYS9P38999 446 aa4.37□□□□□ -1.71
RPN13YLR421C ECM1P39715 212 aa4.37□□□□□ -1.71
RPN13YLR421C APM1Q00776 475 aaPredicted RBP4.37□□□□□ -1.71
RPN13YLR421C HOF1Q05080 669 aa4.37□□□□□ -1.71
RPN13YLR421C AFT2Q08957 416 aa4.37□□□□□ -1.71
RPN13YLR421C HRB1P38922 454 aaKnown RBP RIP-Chip data4.36□□□□□ -1.71not detected
RPN13YLR421C CTK1Q03957 528 aaKnown RBP4.36□□□□□ -1.71
RPN13YLR421C GAL11P19659 1081 aa4.35□□□□□ -1.71
RPN13YLR421C GLG1P36143 616 aa4.35□□□□□ -1.71
RPN13YLR421C UBS1P38290 277 aa4.35□□□□□ -1.71
RPN13YLR421C NMD2P38798 1089 aaKnown RBP4.35□□□□□ -1.71
RPN13YLR421C YJL049WP47048 450 aa4.35□□□□□ -1.71
RPN13YLR421C RGC1Q06108 1083 aaKnown RBP4.35□□□□□ -1.71
RPN13YLR421C INO80P53115 1489 aa4.35□□□□□ -1.71
RPN13YLR421C PHO11P35842 467 aa4.34□□□□□ -1.71
RPN13YLR421C PHO12P38693 467 aa4.34□□□□□ -1.71
RPN13YLR421C NUP60P39705 539 aa4.34□□□□□ -1.71
RPN13YLR421C YEL020CP39994 560 aa4.34□□□□□ -1.71
RPN13YLR421C ARG2P40360 574 aa4.34□□□□□ -1.71
RPN13YLR421C CTR1P49573 406 aa4.34□□□□□ -1.71
RPN13YLR421C YLR149CQ99296 730 aa4.34□□□□□ -1.71
RPN13YLR421C ERG6P25087 383 aaKnown RBP4.33□□□□□ -1.72
RPN13YLR421C APL2P36000 726 aaPredicted RBP4.33□□□□□ -1.72
RPN13YLR421C BDH2P39713 417 aa4.33□□□□□ -1.72
RPN13YLR421C ORC4P54791 529 aa4.33□□□□□ -1.72
RPN13YLR421C ARG5,6Q01217 863 aa4.33□□□□□ -1.72
RPN13YLR421C MLH3Q12083 715 aa4.33□□□□□ -1.72
RPN13YLR421C HRP1Q99383 534 aaKnown RBP4.33□□□□□ -1.72
RPN13YLR421C Q0142Q9ZZW4 58 aa4.33□□□□□ -1.72
RPN13YLR421C TRZ1P36159 838 aaPredicted RBP4.32□□□□□ -1.72
RPN13YLR421C YFL052WP43551 465 aa4.32□□□□□ -1.72
RPN13YLR421C FHN1P53279 174 aa4.32□□□□□ -1.72
RPN13YLR421C APT2P36973 181 aa4.31□□□□□ -1.72
RPN13YLR421C UBC9P50623 157 aaPredicted RBP4.31□□□□□ -1.72
RPN13YLR421C ATG4P53867 494 aa4.31□□□□□ -1.72
RPN13YLR421C MRI1Q06489 411 aaKnown RBP4.31□□□□□ -1.72
RPN13YLR421C YOL098CQ12496 1037 aa4.31□□□□□ -1.72
RPN13YLR421C RPN13O13563 156 aa4.3□□□□□ -1.72
RPN13YLR421C TOP1P04786 769 aa4.3□□□□□ -1.72
RPN13YLR421C MCD4P36051 919 aa4.3□□□□□ -1.72
RPN13YLR421C GDH3P39708 457 aa4.3□□□□□ -1.72
RPN13YLR421C BNA2P47125 453 aa4.3□□□□□ -1.72
RPN13YLR421C MCM21Q06675 368 aa4.3□□□□□ -1.72
RPN13YLR421C YAP7Q08182 245 aa4.3□□□□□ -1.72
RPN13YLR421C CDC53Q12018 815 aaKnown RBP4.3□□□□□ -1.72
RPN13YLR421C USV1Q12132 391 aa4.3□□□□□ -1.72
RPN13YLR421C CCR4P31384 837 aaKnown RBP4.29□□□□□ -1.72
RPN13YLR421C MTC2P34246 357 aa4.29□□□□□ -1.72
RPN13YLR421C MIP6P38760 659 aaKnown RBP4.29□□□□□ -1.72
RPN13YLR421C GET2P40056 285 aa4.29□□□□□ -1.72
RPN13YLR421C NPY1P53164 384 aa4.29□□□□□ -1.72
RPN13YLR421C ICT1Q12385 394 aa4.29□□□□□ -1.72
RPN13YLR421C ZRT2Q12436 422 aa4.29□□□□□ -1.72
RPN13YLR421C ERR1P0CX10 437 aa4.28□□□□□ -1.72
Retrieved 100 of 5,963 RNA–protein pairs in 70.9 ms