RNA–Protein interactions for RNA: YKR053C

YSR3, Transcript of Dihydrosphingosine 1-phosphate phosphatase, yeastyeast

Gene YSR3, Length 1,215 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YSR3YKR053C COX11P19516 300 aaKnown RBP10.89□□□□□ -0.67
YSR3YKR053C IME1P21190 360 aa10.89□□□□□ -0.67
YSR3YKR053C APL1P27351 700 aa10.89□□□□□ -0.67
YSR3YKR053C AGP2P38090 596 aa10.89□□□□□ -0.67
YSR3YKR053C RGD1P38339 666 aa10.89□□□□□ -0.67
YSR3YKR053C PCM1P38628 557 aaKnown RBP10.89□□□□□ -0.67
YSR3YKR053C SAH1P39954 449 aaKnown RBP10.89□□□□□ -0.67
YSR3YKR053C ALT1P52893 592 aa10.89□□□□□ -0.67
YSR3YKR053C ABP140Q08641 628 aaKnown RBP10.89□□□□□ -0.67
YSR3YKR053C GAL10P04397 699 aa10.88□□□□□ -0.67
YSR3YKR053C CDC37P06101 506 aaKnown RBP10.88□□□□□ -0.67
YSR3YKR053C CHS1P08004 1131 aa10.88□□□□□ -0.67
YSR3YKR053C CDC42P19073 191 aa10.88□□□□□ -0.67
YSR3YKR053C SCJ1P25303 377 aa10.88□□□□□ -0.67
YSR3YKR053C SHE3P38272 425 aaKnown RBP10.88□□□□□ -0.67
YSR3YKR053C CPR7P47103 393 aa10.88□□□□□ -0.67
YSR3YKR053C LEA1Q08963 238 aaPredicted RBP10.88□□□□□ -0.67
YSR3YKR053C TAF10Q12030 206 aa10.88□□□□□ -0.67
YSR3YKR053C SPE3Q12074 293 aaKnown RBP10.88□□□□□ -0.67
YSR3YKR053C YDL206WQ12424 762 aa10.88□□□□□ -0.67
YSR3YKR053C YJR054WP47114 497 aa10.87□□□□□ -0.67
YSR3YKR053C STE20Q03497 939 aaKnown RBP10.87□□□□□ -0.67
YSR3YKR053C CEF1Q03654 590 aaPredicted RBP10.87□□□□□ -0.67
YSR3YKR053C YDR344CQ05510 147 aa10.87□□□□□ -0.67
YSR3YKR053C YLR297WQ05899 129 aa10.87□□□□□ -0.67
YSR3YKR053C SGO1Q08490 590 aa10.87□□□□□ -0.67
YSR3YKR053C SPO11P23179 398 aa10.86□□□□□ -0.67
YSR3YKR053C RRT12P25381 491 aa10.86□□□□□ -0.67
YSR3YKR053C GAC1P28006 793 aa10.86□□□□□ -0.67
YSR3YKR053C TGL3P40308 642 aa10.86□□□□□ -0.67
YSR3YKR053C VPS25P47142 202 aa10.86□□□□□ -0.67
YSR3YKR053C PPM1Q04081 328 aa10.86□□□□□ -0.67
YSR3YKR053C SPO75Q07798 868 aa10.86□□□□□ -0.67
YSR3YKR053C TFC8Q12308 588 aa10.86□□□□□ -0.67
YSR3YKR053C RRD2Q12461 358 aa10.86□□□□□ -0.67
YSR3YKR053C RNR1P21524 888 aaKnown RBP10.85□□□□□ -0.67
YSR3YKR053C MET4P32389 672 aa10.85□□□□□ -0.67
YSR3YKR053C CBF2P32504 956 aa10.85□□□□□ -0.67
YSR3YKR053C IME2P32581 645 aa10.85□□□□□ -0.67
YSR3YKR053C KIC1P38692 1080 aa10.85□□□□□ -0.67
YSR3YKR053C LSB6P42951 607 aa10.85□□□□□ -0.67
YSR3YKR053C SLG1P54867 378 aa10.85□□□□□ -0.67
YSR3YKR053C CSR1Q06705 408 aaKnown RBP10.85□□□□□ -0.67
YSR3YKR053C KEX2P13134 814 aa10.84□□□□□ -0.67
YSR3YKR053C PDE1P22434 369 aa10.84□□□□□ -0.67
YSR3YKR053C IMG2P25642 146 aaPredicted RBP10.84□□□□□ -0.67
YSR3YKR053C PPZ1P26570 692 aa10.84□□□□□ -0.67
YSR3YKR053C KIP1P28742 1111 aa10.84□□□□□ -0.67
YSR3YKR053C YET1P35723 206 aa10.84□□□□□ -0.67
YSR3YKR053C SBE2P42223 864 aaKnown RBP10.84□□□□□ -0.67
YSR3YKR053C GPM2Q12008 311 aa10.84□□□□□ -0.67
YSR3YKR053C HRT3Q12347 344 aa10.84□□□□□ -0.67
YSR3YKR053C ATE1P16639 503 aa10.83□□□□□ -0.68
YSR3YKR053C BET2P20133 325 aa10.83□□□□□ -0.68
YSR3YKR053C EFB1P32471 206 aaKnown RBP10.83□□□□□ -0.68
YSR3YKR053C FRE1P32791 686 aa10.83□□□□□ -0.68
YSR3YKR053C TKL2P33315 681 aa10.83□□□□□ -0.68
YSR3YKR053C RPC25P35718 212 aa10.83□□□□□ -0.68
YSR3YKR053C GEM1P39722 662 aa10.83□□□□□ -0.68
YSR3YKR053C DSE1P40077 573 aa10.83□□□□□ -0.68
YSR3YKR053C UBP3Q01477 912 aaKnown RBP RIP-Chip data10.83□□□□□ -0.68not detected
YSR3YKR053C TMA16Q08687 178 aa10.83□□□□□ -0.68
YSR3YKR053C ECM3Q99252 613 aa10.83□□□□□ -0.68
YSR3YKR053C YLR422WQ06409 1932 aa10.83□□□□□ -0.68
YSR3YKR053C PSY4P38193 441 aa10.82□□□□□ -0.68
YSR3YKR053C SDS3P40505 327 aa10.82□□□□□ -0.68
YSR3YKR053C ZAP1P47043 880 aa10.82□□□□□ -0.68
YSR3YKR053C LEE1Q02799 301 aaKnown RBP10.82□□□□□ -0.68
YSR3YKR053C MZM1Q03429 123 aaPredicted RBP10.82□□□□□ -0.68
YSR3YKR053C AI5_BETAQ9ZZX0 354 aa10.82□□□□□ -0.68
YSR3YKR053C PEX34P25584 144 aa10.81□□□□□ -0.68
YSR3YKR053C CDC11P32458 415 aa10.81□□□□□ -0.68
YSR3YKR053C CDC27P38042 758 aa10.81□□□□□ -0.68
YSR3YKR053C MIP6P38760 659 aaKnown RBP10.81□□□□□ -0.68
YSR3YKR053C MUB1Q03162 620 aa10.81□□□□□ -0.68
YSR3YKR053C WAR1Q03631 944 aa10.81□□□□□ -0.68
YSR3YKR053C NSE5Q03718 556 aa10.81□□□□□ -0.68
YSR3YKR053C PML39Q03760 334 aa10.81□□□□□ -0.68
YSR3YKR053C PRM6Q04705 352 aa10.81□□□□□ -0.68
YSR3YKR053C SAT4P25333 603 aaKnown RBP10.8□□□□□ -0.68
YSR3YKR053C VBA3P25594 458 aa10.8□□□□□ -0.68
YSR3YKR053C TSA1P34760 196 aaKnown RBP10.8□□□□□ -0.68
YSR3YKR053C VBA5P36172 582 aa10.8□□□□□ -0.68
YSR3YKR053C NOP4P37838 685 aaKnown RBP10.8□□□□□ -0.68
YSR3YKR053C YMC2P38087 329 aa10.8□□□□□ -0.68
YSR3YKR053C ARL1P38116 183 aaKnown RBP10.8□□□□□ -0.68
YSR3YKR053C RAD55P38953 406 aa10.8□□□□□ -0.68
YSR3YKR053C SHQ1P40486 507 aaPredicted RBP10.8□□□□□ -0.68
YSR3YKR053C PSP1P50896 841 aaKnown RBP10.8□□□□□ -0.68
YSR3YKR053C ESBP6P53918 673 aa10.8□□□□□ -0.68
YSR3YKR053C YNL011CP53980 444 aa10.8□□□□□ -0.68
YSR3YKR053C FMP25Q08023 583 aa10.8□□□□□ -0.68
YSR3YKR053C CSG2P35206 410 aa10.79□□□□□ -0.68
YSR3YKR053C SAP190P36123 1033 aa10.79□□□□□ -0.68
YSR3YKR053C YKR051WP36142 418 aa10.79□□□□□ -0.68
YSR3YKR053C SIF2P38262 535 aa10.79□□□□□ -0.68
YSR3YKR053C SFB3P38810 929 aa10.79□□□□□ -0.68
YSR3YKR053C DRN1P53255 507 aaKnown RBP10.79□□□□□ -0.68
YSR3YKR053C HER2Q03557 464 aa10.79□□□□□ -0.68
YSR3YKR053C CWC2Q12046 339 aaPredicted RBP10.79□□□□□ -0.68
Retrieved 100 of 5,963 RNA–protein pairs in 34.7 ms