RNA–Protein interactions for RNA: YJL047C

RTT101, Transcript of Cullin subunit of a Roc1p-dependent E3 ubiquitin ligase complex, yeastyeast

Gene RTT101, Length 2,529 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RTT101YJL047C YJL055WP47044 245 aa2.26□□□□□ -2.05
RTT101YJL047C HXT16P47185 567 aa2.26□□□□□ -2.05
RTT101YJL047C SKP1P52286 194 aa2.26□□□□□ -2.05
RTT101YJL047C YPL071CQ02864 156 aa2.26□□□□□ -2.05
RTT101YJL047C HOS3Q02959 697 aaKnown RBP2.26□□□□□ -2.05
RTT101YJL047C NHX1Q04121 633 aa2.26□□□□□ -2.05
RTT101YJL047C SPP382Q06411 708 aaPredicted RBP2.26□□□□□ -2.05
RTT101YJL047C ESC8Q08119 714 aa2.26□□□□□ -2.05
RTT101YJL047C CEX1Q12453 761 aa2.26□□□□□ -2.05
RTT101YJL047C NOP56Q12460 504 aaKnown RBP RIP-Chip data2.26□□□□□ -2.05not detected
RTT101YJL047C APM4Q99186 491 aa2.26□□□□□ -2.05
RTT101YJL047C SEM1O94742 89 aa2.25□□□□□ -2.05
RTT101YJL047C MTF2P10849 440 aa2.25□□□□□ -2.05
RTT101YJL047C HSF1P10961 833 aa2.25□□□□□ -2.05
RTT101YJL047C FUS1P11710 512 aa2.25□□□□□ -2.05
RTT101YJL047C CBP3P21560 335 aa2.25□□□□□ -2.05
RTT101YJL047C ERG3P32353 365 aa2.25□□□□□ -2.05
RTT101YJL047C NPL6P32832 435 aa2.25□□□□□ -2.05
RTT101YJL047C YKL100CP34248 587 aa2.25□□□□□ -2.05
RTT101YJL047C YKL151CP36059 337 aa2.25□□□□□ -2.05
RTT101YJL047C HSL7P38274 827 aa2.25□□□□□ -2.05
RTT101YJL047C YBR225WP38321 900 aa2.25□□□□□ -2.05
RTT101YJL047C SHU2P38957 223 aa2.25□□□□□ -2.05
RTT101YJL047C LYS14P40971 790 aa2.25□□□□□ -2.05
RTT101YJL047C PTK2P47116 818 aaKnown RBP2.25□□□□□ -2.05
RTT101YJL047C BNA2P47125 453 aa2.25□□□□□ -2.05
RTT101YJL047C ZIP2P53061 704 aa2.25□□□□□ -2.05
RTT101YJL047C PRP42Q03776 544 aaKnown RBP2.25□□□□□ -2.05
RTT101YJL047C YMR155WQ03795 547 aa2.25□□□□□ -2.05
RTT101YJL047C YDR131CQ03899 556 aa2.25□□□□□ -2.05
RTT101YJL047C HRQ1Q05549 1077 aa2.25□□□□□ -2.05
RTT101YJL047C YLR345WQ06137 509 aa2.25□□□□□ -2.05
RTT101YJL047C MET17P06106 444 aa2.25□□□□□ -2.05
RTT101YJL047C ADH4P10127 382 aa2.25□□□□□ -2.05
RTT101YJL047C PDX1P16451 410 aa2.25□□□□□ -2.05
RTT101YJL047C PHO3P24031 467 aa2.25□□□□□ -2.05
RTT101YJL047C REC104P33323 182 aa2.25□□□□□ -2.05
RTT101YJL047C ESL2P36168 1195 aa2.25□□□□□ -2.05
RTT101YJL047C RGD1P38339 666 aa2.25□□□□□ -2.05
RTT101YJL047C PUG1P40100 303 aa2.25□□□□□ -2.05
RTT101YJL047C YJR124CP47159 448 aa2.25□□□□□ -2.05
RTT101YJL047C CBK1P53894 756 aa2.25□□□□□ -2.05
RTT101YJL047C PTA1Q01329 785 aaPredicted RBP2.25□□□□□ -2.05
RTT101YJL047C CUE5Q08412 411 aaKnown RBP2.25□□□□□ -2.05
RTT101YJL047C MCH5Q08777 521 aa2.25□□□□□ -2.05
RTT101YJL047C MET32Q12041 191 aa2.25□□□□□ -2.05
RTT101YJL047C CWC2Q12046 339 aaPredicted RBP2.25□□□□□ -2.05
RTT101YJL047C SMF3Q12078 473 aaPredicted RBP2.25□□□□□ -2.05
RTT101YJL047C ADE8P04161 214 aa2.24□□□□□ -2.05
RTT101YJL047C HTS1P07263 546 aaKnown RBP2.24□□□□□ -2.05
RTT101YJL047C RPL11AP0C0W9 174 aaKnown RBP2.24□□□□□ -2.05
RTT101YJL047C CDC48P25694 835 aaKnown RBP2.24□□□□□ -2.05
RTT101YJL047C SEC65P29478 273 aa2.24□□□□□ -2.05
RTT101YJL047C CYS3P31373 394 aaKnown RBP2.24□□□□□ -2.05
RTT101YJL047C STE13P33894 931 aa2.24□□□□□ -2.05
RTT101YJL047C YKL077WP36081 392 aa2.24□□□□□ -2.05
RTT101YJL047C SET3P36124 751 aa2.24□□□□□ -2.05
RTT101YJL047C PGM2P37012 569 aaKnown RBP2.24□□□□□ -2.05
RTT101YJL047C YBR138CP38277 524 aa2.24□□□□□ -2.05
RTT101YJL047C NPP2P39997 493 aa2.24□□□□□ -2.05
RTT101YJL047C LSB6P42951 607 aa2.24□□□□□ -2.05
RTT101YJL047C YJL181WP46987 611 aa2.24□□□□□ -2.05
RTT101YJL047C EAR1Q03212 550 aa2.24□□□□□ -2.05
RTT101YJL047C YLR257WQ06146 321 aaKnown RBP2.24□□□□□ -2.05
RTT101YJL047C NFI1Q12216 726 aa2.24□□□□□ -2.05
RTT101YJL047C RPL11BQ3E757 174 aaPredicted RBP2.24□□□□□ -2.05
RTT101YJL047C ARG3P05150 338 aa2.24□□□□□ -2.05
RTT101YJL047C CKA1P15790 372 aa2.24□□□□□ -2.05
RTT101YJL047C OLE1P21147 510 aaKnown RBP2.24□□□□□ -2.05
RTT101YJL047C UBC1P21734 215 aaKnown RBP2.24□□□□□ -2.05
RTT101YJL047C YCL002CP25565 263 aa2.24□□□□□ -2.05
RTT101YJL047C POL4P25615 582 aa2.24□□□□□ -2.05
RTT101YJL047C SEC21P32074 935 aaKnown RBP2.24□□□□□ -2.05
RTT101YJL047C XRS2P33301 854 aa2.24□□□□□ -2.05
RTT101YJL047C YKR051WP36142 418 aa2.24□□□□□ -2.05
RTT101YJL047C YER010CP40011 234 aa2.24□□□□□ -2.05
RTT101YJL047C SCS2P40075 244 aaKnown RBP2.24□□□□□ -2.05
RTT101YJL047C SPO74P45819 413 aa2.24□□□□□ -2.05
RTT101YJL047C PUS4P48567 403 aaKnown RBP2.24□□□□□ -2.05
RTT101YJL047C GUP1P53154 560 aa2.24□□□□□ -2.05
RTT101YJL047C DAM1P53267 343 aa2.24□□□□□ -2.05
RTT101YJL047C NCS2P53923 493 aaPredicted RBP2.24□□□□□ -2.05
RTT101YJL047C ZDS2P54786 942 aa2.24□□□□□ -2.05
RTT101YJL047C MRPL13Q02204 264 aa2.24□□□□□ -2.05
RTT101YJL047C SNO4Q04902 237 aa2.24□□□□□ -2.05
RTT101YJL047C HSP33Q08914 237 aaKnown RBP2.24□□□□□ -2.05
RTT101YJL047C HSP32Q08992 237 aa2.24□□□□□ -2.05
RTT101YJL047C REX3Q12090 404 aa2.24□□□□□ -2.05
RTT101YJL047C RRP36Q12481 300 aaPredicted RBP2.24□□□□□ -2.05
RTT101YJL047C KCS1Q12494 1050 aa2.24□□□□□ -2.05
RTT101YJL047C Q0142Q9ZZW4 58 aa2.24□□□□□ -2.05
RTT101YJL047C CHD1P32657 1468 aa2.23□□□□□ -2.05
RTT101YJL047C MRP10O75012 95 aa2.23□□□□□ -2.05
RTT101YJL047C CPA2P03965 1118 aaKnown RBP2.23□□□□□ -2.05
RTT101YJL047C NUC1P08466 329 aa2.23□□□□□ -2.05
RTT101YJL047C PMS1P14242 873 aa2.23□□□□□ -2.05
RTT101YJL047C SGF29P25554 259 aa2.23□□□□□ -2.05
RTT101YJL047C DBF4P32325 704 aa2.23□□□□□ -2.05
RTT101YJL047C KNS1P32350 737 aaPredicted RBP2.23□□□□□ -2.05
RTT101YJL047C HXT4P32467 576 aa2.23□□□□□ -2.05
Retrieved 100 of 5,963 RNA–protein pairs in 12.5 ms