RNA–Protein interactions for RNA: YDR405W

MRP20, Transcript of Mitochondrial ribosomal protein of the large subunit, yeast

Gene MRP20, Length 792 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
MRP20	YDR405W	SDS3	P40505	327 aa		10.69	□□□□□ -0.7
MRP20	YDR405W	TAF1	P46677	1066 aa		10.69	□□□□□ -0.7
MRP20	YDR405W	YJL045W	P47052	634 aa		10.69	□□□□□ -0.7
MRP20	YDR405W	ADA2	Q02336	434 aa		10.69	□□□□□ -0.7
MRP20	YDR405W	CSR1	Q06705	408 aa	Known RBP	10.69	□□□□□ -0.7
MRP20	YDR405W	TMA16	Q08687	178 aa		10.69	□□□□□ -0.7
MRP20	YDR405W	TAF10	Q12030	206 aa		10.69	□□□□□ -0.7
MRP20	YDR405W	DAP1	Q12091	152 aa		10.69	□□□□□ -0.7
MRP20	YDR405W	GAL10	P04397	699 aa		10.68	□□□□□ -0.7
MRP20	YDR405W	TPK1	P06244	397 aa		10.68	□□□□□ -0.7
MRP20	YDR405W	GCS1	P35197	352 aa		10.68	□□□□□ -0.7
MRP20	YDR405W	YBR284W	P38150	797 aa		10.68	□□□□□ -0.7
MRP20	YDR405W	PSY4	P38193	441 aa		10.68	□□□□□ -0.7
MRP20	YDR405W	MIP6	P38760	659 aa	Known RBP	10.68	□□□□□ -0.7
MRP20	YDR405W	SPT8	P38915	602 aa		10.68	□□□□□ -0.7
MRP20	YDR405W	CPR7	P47103	393 aa		10.68	□□□□□ -0.7
MRP20	YDR405W	WAR1	Q03631	944 aa		10.68	□□□□□ -0.7
MRP20	YDR405W	CEF1	Q03654	590 aa	Predicted RBP	10.68	□□□□□ -0.7
MRP20	YDR405W	PPM1	Q04081	328 aa		10.68	□□□□□ -0.7
MRP20	YDR405W	YLR257W	Q06146	321 aa	Known RBP	10.68	□□□□□ -0.7
MRP20	YDR405W	CHS1	P08004	1131 aa		10.67	□□□□□ -0.7
MRP20	YDR405W	RNR1	P21524	888 aa	Known RBP	10.67	□□□□□ -0.7
MRP20	YDR405W	PGS1	P25578	521 aa		10.67	□□□□□ -0.7
MRP20	YDR405W	SPT5	P27692	1063 aa	Known RBP	10.67	□□□□□ -0.7
MRP20	YDR405W	COQ8	P27697	501 aa		10.67	□□□□□ -0.7
MRP20	YDR405W	RPC25	P35718	212 aa		10.67	□□□□□ -0.7
MRP20	YDR405W	MRPL10	P36520	322 aa		10.67	□□□□□ -0.7
MRP20	YDR405W	YIR016W	P40572	265 aa		10.67	□□□□□ -0.7
MRP20	YDR405W	MGA2	P40578	1113 aa		10.67	□□□□□ -0.7
MRP20	YDR405W	YJR054W	P47114	497 aa		10.67	□□□□□ -0.7
MRP20	YDR405W	ESBP6	P53918	673 aa		10.67	□□□□□ -0.7
MRP20	YDR405W	APM4	Q99186	491 aa		10.67	□□□□□ -0.7
MRP20	YDR405W	SPO11	P23179	398 aa		10.66	□□□□□ -0.7
MRP20	YDR405W	RRT12	P25381	491 aa		10.66	□□□□□ -0.7
MRP20	YDR405W	GAC1	P28006	793 aa		10.66	□□□□□ -0.7
MRP20	YDR405W	CBF2	P32504	956 aa		10.66	□□□□□ -0.7
MRP20	YDR405W	MIC60	P36112	540 aa		10.66	□□□□□ -0.7
MRP20	YDR405W	KIC1	P38692	1080 aa		10.66	□□□□□ -0.7
MRP20	YDR405W	SBE2	P42223	864 aa	Known RBP	10.66	□□□□□ -0.7
MRP20	YDR405W	CTR9	P89105	1077 aa		10.66	□□□□□ -0.7
MRP20	YDR405W	MAS1	P10507	462 aa		10.65	□□□□□ -0.7
MRP20	YDR405W	MSH3	P25336	1018 aa		10.65	□□□□□ -0.7
MRP20	YDR405W	MET4	P32389	672 aa		10.65	□□□□□ -0.7
MRP20	YDR405W	EFB1	P32471	206 aa	Known RBP	10.65	□□□□□ -0.7
MRP20	YDR405W	PEP7	P32609	515 aa		10.65	□□□□□ -0.7
MRP20	YDR405W	NOP4	P37838	685 aa	Known RBP	10.65	□□□□□ -0.7
MRP20	YDR405W	GEM1	P39722	662 aa		10.65	□□□□□ -0.7
MRP20	YDR405W	TGL3	P40308	642 aa		10.65	□□□□□ -0.7
MRP20	YDR405W	MAF1	P41910	395 aa		10.65	□□□□□ -0.7
MRP20	YDR405W	VPS25	P47142	202 aa		10.65	□□□□□ -0.7
MRP20	YDR405W	UBP3	Q01477	912 aa	Known RBP RIP-Chip data	10.65	□□□□□ -0.7	not detected
MRP20	YDR405W	AI5_BETA	Q9ZZX0	354 aa		10.65	□□□□□ -0.7
MRP20	YDR405W	HMG2	P12684	1045 aa		10.64	□□□□□ -0.71
MRP20	YDR405W	YMC2	P38087	329 aa		10.64	□□□□□ -0.71
MRP20	YDR405W	AGP2	P38090	596 aa		10.64	□□□□□ -0.71
MRP20	YDR405W	DSE1	P40077	573 aa		10.64	□□□□□ -0.71
MRP20	YDR405W	MOB1	P40484	314 aa		10.64	□□□□□ -0.71
MRP20	YDR405W	DRN1	P53255	507 aa	Known RBP	10.64	□□□□□ -0.71
MRP20	YDR405W	YNR014W	P53719	212 aa		10.64	□□□□□ -0.71
MRP20	YDR405W	MZM1	Q03429	123 aa	Predicted RBP	10.64	□□□□□ -0.71
MRP20	YDR405W	YPR078C	Q06813	372 aa		10.64	□□□□□ -0.71
MRP20	YDR405W	LEA1	Q08963	238 aa	Predicted RBP	10.64	□□□□□ -0.71
MRP20	YDR405W	CWC2	Q12046	339 aa	Predicted RBP	10.64	□□□□□ -0.71
MRP20	YDR405W	SPE3	Q12074	293 aa	Known RBP	10.64	□□□□□ -0.71
MRP20	YDR405W	TFC8	Q12308	588 aa		10.64	□□□□□ -0.71
MRP20	YDR405W	ECM3	Q99252	613 aa		10.64	□□□□□ -0.71
MRP20	YDR405W	YLR422W	Q06409	1932 aa		10.64	□□□□□ -0.71
MRP20	YDR405W	SNF1	P06782	633 aa	Known RBP	10.63	□□□□□ -0.71
MRP20	YDR405W	FRE1	P32791	686 aa		10.63	□□□□□ -0.71
MRP20	YDR405W	CSG2	P35206	410 aa		10.63	□□□□□ -0.71
MRP20	YDR405W	MPE1	P35728	441 aa	Known RBP	10.63	□□□□□ -0.71
MRP20	YDR405W	RIM4	P38741	713 aa		10.63	□□□□□ -0.71
MRP20	YDR405W	TCB2	P48231	1178 aa		10.63	□□□□□ -0.71
MRP20	YDR405W	SSL2	Q00578	843 aa		10.63	□□□□□ -0.71
MRP20	YDR405W	GPM2	Q12008	311 aa		10.63	□□□□□ -0.71
MRP20	YDR405W	SPE1	P08432	466 aa		10.62	□□□□□ -0.71
MRP20	YDR405W	RPS6A	P0CX37	236 aa	Known RBP	10.62	□□□□□ -0.71
MRP20	YDR405W	RPS6B	P0CX38	236 aa	Predicted RBP	10.62	□□□□□ -0.71
MRP20	YDR405W	MCM2	P29469	868 aa		10.62	□□□□□ -0.71
MRP20	YDR405W	PEX2	P32800	271 aa		10.62	□□□□□ -0.71
MRP20	YDR405W	TKL2	P33315	681 aa		10.62	□□□□□ -0.71
MRP20	YDR405W	NIP100	P33420	868 aa		10.62	□□□□□ -0.71
MRP20	YDR405W	EBP2	P36049	427 aa	Known RBP	10.62	□□□□□ -0.71
MRP20	YDR405W	PCM1	P38628	557 aa	Known RBP	10.62	□□□□□ -0.71
MRP20	YDR405W	PEX28	P38848	579 aa		10.62	□□□□□ -0.71
MRP20	YDR405W	SHQ1	P40486	507 aa	Predicted RBP	10.62	□□□□□ -0.71
MRP20	YDR405W	LSB6	P42951	607 aa		10.62	□□□□□ -0.71
MRP20	YDR405W	RAD59	Q12223	238 aa		10.62	□□□□□ -0.71
MRP20	YDR405W	CDC33	P07260	213 aa	Known RBP	10.61	□□□□□ -0.71
MRP20	YDR405W	APE1	P14904	514 aa		10.61	□□□□□ -0.71
MRP20	YDR405W	SHM1	P37292	490 aa	Predicted RBP	10.61	□□□□□ -0.71
MRP20	YDR405W	RDH54	P38086	958 aa		10.61	□□□□□ -0.71
MRP20	YDR405W	DYS1	P38791	387 aa		10.61	□□□□□ -0.71
MRP20	YDR405W	RAD55	P38953	406 aa		10.61	□□□□□ -0.71
MRP20	YDR405W	VPS70	P47161	811 aa		10.61	□□□□□ -0.71
MRP20	YDR405W	MAP1	Q01662	387 aa	Known RBP RIP-Chip data	10.61	□□□□□ -0.71	not detected
MRP20	YDR405W	MUB1	Q03162	620 aa		10.61	□□□□□ -0.71
MRP20	YDR405W	YML082W	Q04533	649 aa	Known RBP	10.61	□□□□□ -0.71
MRP20	YDR405W	YLR287C	Q05881	355 aa		10.61	□□□□□ -0.71
MRP20	YDR405W	APC5	Q08683	685 aa		10.61	□□□□□ -0.71

Retrieved 100 of 5,963 RNA–protein pairs in 34.9 ms