RNA–Protein interactions for RNA: YDR136C

VPS61, Transcript of Dubious open reading frame, yeastyeast

Gene VPS61, Length 573 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS61YDR136C SNU71P53207 620 aaKnown RBP6.65□□□□□ -1.34
VPS61YDR136C SUB1P54000 292 aaKnown RBP6.65□□□□□ -1.34
VPS61YDR136C ORC4P54791 529 aa6.65□□□□□ -1.34
VPS61YDR136C PRP3Q03338 469 aaPredicted RBP6.65□□□□□ -1.34
VPS61YDR136C YLR177WQ06251 628 aa6.65□□□□□ -1.34
VPS61YDR136C UTP4Q06679 776 aaKnown RBP6.65□□□□□ -1.34
VPS61YDR136C CMS1Q07897 291 aaKnown RBP6.65□□□□□ -1.34
VPS61YDR136C RRG1Q12167 365 aaPredicted RBP6.65□□□□□ -1.34
VPS61YDR136C HIF1Q12373 385 aa6.65□□□□□ -1.34
VPS61YDR136C SWI6P09959 803 aa6.64□□□□□ -1.35
VPS61YDR136C KAR3P17119 729 aa6.64□□□□□ -1.35
VPS61YDR136C SRV2P17555 526 aaKnown RBP6.64□□□□□ -1.35
VPS61YDR136C SDH2P21801 266 aa6.64□□□□□ -1.35
VPS61YDR136C CAP1P28495 268 aaKnown RBP6.64□□□□□ -1.35
VPS61YDR136C GCD6P32501 712 aaKnown RBP6.64□□□□□ -1.35
VPS61YDR136C UGA4P32837 571 aa6.64□□□□□ -1.35
VPS61YDR136C TFC4P33339 1025 aa6.64□□□□□ -1.35
VPS61YDR136C VPS35P34110 944 aa6.64□□□□□ -1.35
VPS61YDR136C YBR062CP38239 180 aa6.64□□□□□ -1.35
VPS61YDR136C RRD1P40454 393 aaKnown RBP6.64□□□□□ -1.35
VPS61YDR136C LCB2P40970 561 aa6.64□□□□□ -1.35
VPS61YDR136C TDA10P42938 290 aa6.64□□□□□ -1.35
VPS61YDR136C YJL007CP47080 104 aa6.64□□□□□ -1.35
VPS61YDR136C CPR6P53691 371 aaKnown RBP6.64□□□□□ -1.35
VPS61YDR136C TIM8P57744 87 aa6.64□□□□□ -1.35
VPS61YDR136C SHR3Q02774 210 aa6.64□□□□□ -1.35
VPS61YDR136C SEN54Q02825 467 aaPredicted RBP6.64□□□□□ -1.35
VPS61YDR136C SPC24Q04477 213 aa6.64□□□□□ -1.35
VPS61YDR136C FAR8Q05040 523 aa6.64□□□□□ -1.35
VPS61YDR136C MOD5P07884 428 aa6.63□□□□□ -1.35
VPS61YDR136C POL3P15436 1097 aa6.63□□□□□ -1.35
VPS61YDR136C KIP1P28742 1111 aa6.63□□□□□ -1.35
VPS61YDR136C PGM1P33401 570 aaKnown RBP6.63□□□□□ -1.35
VPS61YDR136C RPC37P36121 282 aa6.63□□□□□ -1.35
VPS61YDR136C PGM2P37012 569 aaKnown RBP6.63□□□□□ -1.35
VPS61YDR136C RRT2P38332 387 aa6.63□□□□□ -1.35
VPS61YDR136C END3P39013 349 aa6.63□□□□□ -1.35
VPS61YDR136C TIF4631P39935 952 aaKnown RBP6.63□□□□□ -1.35
VPS61YDR136C KAP123P40069 1113 aaKnown RBP6.63□□□□□ -1.35
VPS61YDR136C INA22P40576 216 aa6.63□□□□□ -1.35
VPS61YDR136C GPD2P41911 440 aaKnown RBP6.63□□□□□ -1.35
VPS61YDR136C FMS1P50264 508 aa6.63□□□□□ -1.35
VPS61YDR136C CNM67P53865 581 aaKnown RBP6.63□□□□□ -1.35
VPS61YDR136C DON1Q05610 365 aa6.63□□□□□ -1.35
VPS61YDR136C CLN3P13365 580 aa6.62□□□□□ -1.35
VPS61YDR136C CHS2P14180 963 aa6.62□□□□□ -1.35
VPS61YDR136C PRP4P20053 465 aaKnown RBP6.62□□□□□ -1.35
VPS61YDR136C AMS1P22855 1083 aa6.62□□□□□ -1.35
VPS61YDR136C ADP1P25371 1049 aa6.62□□□□□ -1.35
VPS61YDR136C SUV3P32580 737 aa6.62□□□□□ -1.35
VPS61YDR136C YSC83P32792 385 aa6.62□□□□□ -1.35
VPS61YDR136C EXO5P38289 585 aa6.62□□□□□ -1.35
VPS61YDR136C MSG5P38590 489 aa6.62□□□□□ -1.35
VPS61YDR136C ULP2P40537 1034 aaPredicted RBP6.62□□□□□ -1.35
VPS61YDR136C MDR1P53258 950 aa6.62□□□□□ -1.35
VPS61YDR136C DIP5P53388 608 aa6.62□□□□□ -1.35
VPS61YDR136C ARK1P53974 638 aa6.62□□□□□ -1.35
VPS61YDR136C GTR1Q00582 310 aa6.62□□□□□ -1.35
VPS61YDR136C UBP3Q01477 912 aaKnown RBP RIP-Chip data6.62□□□□□ -1.35not detected
VPS61YDR136C YPL109CQ02981 657 aa6.62□□□□□ -1.35
VPS61YDR136C TMA64Q04600 565 aaKnown RBP6.62□□□□□ -1.35
VPS61YDR136C YDR278CQ05612 105 aa6.62□□□□□ -1.35
VPS61YDR136C WHI4Q07655 649 aaKnown RBP6.62□□□□□ -1.35
VPS61YDR136C RKM4Q12504 494 aa6.62□□□□□ -1.35
VPS61YDR136C ARP6Q12509 438 aa6.62□□□□□ -1.35
VPS61YDR136C TY4A-HQ6Q5P6 413 aa6.62□□□□□ -1.35
VPS61YDR136C ILV2P07342 687 aaKnown RBP6.61□□□□□ -1.35
VPS61YDR136C YML002WP0CF17 737 aa6.61□□□□□ -1.35
VPS61YDR136C TCP1P12612 559 aaKnown RBP6.61□□□□□ -1.35
VPS61YDR136C SPO16P17122 198 aa6.61□□□□□ -1.35
VPS61YDR136C BAS1P22035 811 aa6.61□□□□□ -1.35
VPS61YDR136C PUF4P25339 888 aaKnown RBP RIP-Chip data6.61□□□□□ -1.35not detected
VPS61YDR136C BIO2P32451 375 aa6.61□□□□□ -1.35
VPS61YDR136C YBL028CP38202 106 aa6.61□□□□□ -1.35
VPS61YDR136C NCL1P38205 684 aaKnown RBP6.61□□□□□ -1.35
VPS61YDR136C UTP7P40055 554 aaKnown RBP6.61□□□□□ -1.35
VPS61YDR136C RPL34BP40525 121 aaKnown RBP6.61□□□□□ -1.35
VPS61YDR136C YJR142WP47173 342 aa6.61□□□□□ -1.35
VPS61YDR136C ATG1P53104 897 aa6.61□□□□□ -1.35
VPS61YDR136C ALD6P54115 500 aaKnown RBP6.61□□□□□ -1.35
VPS61YDR136C HOT1Q03213 719 aa6.61□□□□□ -1.35
VPS61YDR136C ATG16Q03818 150 aa6.61□□□□□ -1.35
VPS61YDR136C TDA5Q06417 326 aaKnown RBP6.61□□□□□ -1.35
VPS61YDR136C PUF3Q07807 879 aaKnown RBP RIP-Chip data6.61□□□□□ -1.35not detected
VPS61YDR136C ACM1Q08981 209 aa6.61□□□□□ -1.35
VPS61YDR136C LAP2Q10740 671 aa6.61□□□□□ -1.35
VPS61YDR136C PGK1P00560 416 aaKnown RBP6.6□□□□□ -1.35
VPS61YDR136C TUB2P02557 457 aaKnown RBP6.6□□□□□ -1.35
VPS61YDR136C CDC33P07260 213 aaKnown RBP6.6□□□□□ -1.35
VPS61YDR136C SUP45P12385 437 aaKnown RBP6.6□□□□□ -1.35
VPS61YDR136C SEC14P24280 304 aaKnown RBP6.6□□□□□ -1.35
VPS61YDR136C GPI10P30777 616 aa6.6□□□□□ -1.35
VPS61YDR136C DBF4P32325 704 aa6.6□□□□□ -1.35
VPS61YDR136C AFG2P32794 780 aa6.6□□□□□ -1.35
VPS61YDR136C YBL055CP34220 418 aaPredicted RBP6.6□□□□□ -1.35
VPS61YDR136C PBP2P38151 413 aaKnown RBP RIP-Chip data6.6□□□□□ -1.35not detected
VPS61YDR136C UBP13P38187 747 aa6.6□□□□□ -1.35
VPS61YDR136C VHC1P38329 1120 aa6.6□□□□□ -1.35
VPS61YDR136C RPN3P40016 523 aaKnown RBP6.6□□□□□ -1.35
VPS61YDR136C YTA12P40341 825 aa6.6□□□□□ -1.35
Retrieved 100 of 5,963 RNA–protein pairs in 17.3 ms