RNA–Protein interactions for RNA: YDL154W

MSH5, Transcript of Protein of the MutS family, yeastyeast

Gene MSH5, Length 2,706 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSH5YDL154W HOG1P32485 435 aa2.19□□□□□ -2.06
MSH5YDL154W RPD3P32561 433 aa2.19□□□□□ -2.06
MSH5YDL154W UBC9P50623 157 aaPredicted RBP2.19□□□□□ -2.06
MSH5YDL154W AIM14P53109 570 aa2.19□□□□□ -2.06
MSH5YDL154W MET13P53128 600 aa2.19□□□□□ -2.06
MSH5YDL154W BRE4Q07660 1125 aa2.19□□□□□ -2.06
MSH5YDL154W PDR12Q02785 1511 aa2.19□□□□□ -2.06
MSH5YDL154W SPE1P08432 466 aa2.19□□□□□ -2.06
MSH5YDL154W HMG1P12683 1054 aa2.19□□□□□ -2.06
MSH5YDL154W SED4P25365 1065 aa2.19□□□□□ -2.06
MSH5YDL154W YKR075CP36155 307 aa2.19□□□□□ -2.06
MSH5YDL154W HSL7P38274 827 aa2.19□□□□□ -2.06
MSH5YDL154W TDA3P38758 523 aa2.19□□□□□ -2.06
MSH5YDL154W YJR008WP47085 338 aa2.19□□□□□ -2.06
MSH5YDL154W YKE2P52553 114 aa2.19□□□□□ -2.06
MSH5YDL154W MSC2Q03455 724 aa2.19□□□□□ -2.06
MSH5YDL154W SIZ1Q04195 904 aa2.19□□□□□ -2.06
MSH5YDL154W SGD1Q06132 899 aa2.19□□□□□ -2.06
MSH5YDL154W VTH1P40438 1549 aa2.18□□□□□ -2.06
MSH5YDL154W VTH2P40890 1549 aa2.18□□□□□ -2.06
MSH5YDL154W PUB1P32588 453 aaKnown RBP RIP-Chip data2.18□□□□□ -2.06not detected
MSH5YDL154W MCD4P36051 919 aa2.18□□□□□ -2.06
MSH5YDL154W PZF1P39933 429 aa2.18□□□□□ -2.06
MSH5YDL154W MND2P40577 368 aa2.18□□□□□ -2.06
MSH5YDL154W YJR096WP47137 282 aa2.18□□□□□ -2.06
MSH5YDL154W YGR153WP48238 217 aa2.18□□□□□ -2.06
MSH5YDL154W MTR3P48240 250 aaPredicted RBP2.18□□□□□ -2.06
MSH5YDL154W SPT20P50875 604 aa2.18□□□□□ -2.06
MSH5YDL154W RTS3P53289 263 aa2.18□□□□□ -2.06
MSH5YDL154W RPN7Q06103 429 aaKnown RBP2.18□□□□□ -2.06
MSH5YDL154W ATG33Q06485 197 aa2.18□□□□□ -2.06
MSH5YDL154W CDA1Q06702 301 aa2.18□□□□□ -2.06
MSH5YDL154W TPO1Q07824 586 aa2.18□□□□□ -2.06
MSH5YDL154W TRE2Q08693 809 aa2.18□□□□□ -2.06
MSH5YDL154W TMA17Q12513 150 aa2.18□□□□□ -2.06
MSH5YDL154W MRC1P25588 1096 aa2.18□□□□□ -2.06
MSH5YDL154W PCL2P25693 308 aa2.18□□□□□ -2.06
MSH5YDL154W ABZ1P37254 787 aaPredicted RBP2.18□□□□□ -2.06
MSH5YDL154W NIT1P40447 199 aa2.18□□□□□ -2.06
MSH5YDL154W HDA1P53973 706 aa2.18□□□□□ -2.06
MSH5YDL154W YMR206WQ03695 313 aa2.18□□□□□ -2.06
MSH5YDL154W SSL1Q04673 461 aaPredicted RBP2.18□□□□□ -2.06
MSH5YDL154W RXT3Q07458 294 aa2.18□□□□□ -2.06
MSH5YDL154W YLR001CQ07895 862 aa2.18□□□□□ -2.06
MSH5YDL154W NGG1P32494 702 aa2.17□□□□□ -2.06
MSH5YDL154W LAM1P38851 1228 aa2.17□□□□□ -2.06
MSH5YDL154W CKB2P38930 258 aa2.17□□□□□ -2.06
MSH5YDL154W SSY5P47002 699 aa2.17□□□□□ -2.06
MSH5YDL154W YBP2P53169 641 aa2.17□□□□□ -2.06
MSH5YDL154W SWM1Q12379 170 aa2.17□□□□□ -2.06
MSH5YDL154W DFG16Q99234 619 aa2.17□□□□□ -2.06
MSH5YDL154W ATG19P35193 415 aa2.17□□□□□ -2.06
MSH5YDL154W PCM1P38628 557 aaKnown RBP2.17□□□□□ -2.06
MSH5YDL154W YHR078WP38799 552 aa2.17□□□□□ -2.06
MSH5YDL154W GCV2P49095 1034 aa2.17□□□□□ -2.06
MSH5YDL154W FOL1P53848 824 aa2.17□□□□□ -2.06
MSH5YDL154W ORC4P54791 529 aa2.17□□□□□ -2.06
MSH5YDL154W MTQ2Q03920 221 aaPredicted RBP2.17□□□□□ -2.06
MSH5YDL154W YHM2Q04013 314 aa2.17□□□□□ -2.06
MSH5YDL154W GPB1Q08886 897 aa2.17□□□□□ -2.06
MSH5YDL154W YTM1Q12024 460 aaPredicted RBP2.17□□□□□ -2.06
MSH5YDL154W RIB2Q12362 591 aaKnown RBP2.17□□□□□ -2.06
MSH5YDL154W CAD1P24813 409 aaKnown RBP2.16□□□□□ -2.06
MSH5YDL154W EMC1P25574 760 aa2.16□□□□□ -2.06
MSH5YDL154W SAK1P38990 1142 aa2.16□□□□□ -2.06
MSH5YDL154W MGS1P40151 587 aa2.16□□□□□ -2.06
MSH5YDL154W ZIP2P53061 704 aa2.16□□□□□ -2.06
MSH5YDL154W NCS6P53088 359 aa2.16□□□□□ -2.06
MSH5YDL154W MRPL22P53881 309 aa2.16□□□□□ -2.06
MSH5YDL154W GPD1Q00055 391 aaKnown RBP2.16□□□□□ -2.06
MSH5YDL154W HAL9Q12180 1030 aa2.16□□□□□ -2.06
MSH5YDL154W SKI3P17883 1432 aaKnown RBP2.16□□□□□ -2.06
MSH5YDL154W PDR11P40550 1411 aa2.16□□□□□ -2.06
MSH5YDL154W KAR1P11927 433 aa2.16□□□□□ -2.06
MSH5YDL154W FLR1P38124 548 aa2.16□□□□□ -2.06
MSH5YDL154W TY4A-JP47023 414 aa2.16□□□□□ -2.06
MSH5YDL154W ECL1P48235 211 aa2.16□□□□□ -2.06
MSH5YDL154W WHI4Q07655 649 aaKnown RBP2.16□□□□□ -2.06
MSH5YDL154W APT2P36973 181 aa2.15□□□□□ -2.06
MSH5YDL154W PTA1Q01329 785 aaPredicted RBP2.15□□□□□ -2.06
MSH5YDL154W PKH1Q03407 766 aa2.15□□□□□ -2.06
MSH5YDL154W NYV1Q12255 253 aa2.15□□□□□ -2.06
MSH5YDL154W RMP1Q12530 201 aa2.15□□□□□ -2.06
MSH5YDL154W TMA7Q3E764 64 aaKnown RBP2.15□□□□□ -2.06
MSH5YDL154W YBR182C-AQ8TGU6 64 aa2.15□□□□□ -2.06
MSH5YDL154W Q0142Q9ZZW4 58 aa2.15□□□□□ -2.06
MSH5YDL154W YKR051WP36142 418 aa2.15□□□□□ -2.07
MSH5YDL154W YAP3P38749 330 aa2.15□□□□□ -2.07
MSH5YDL154W MEF2P39677 819 aa2.15□□□□□ -2.07
MSH5YDL154W SDP1P40479 209 aa2.15□□□□□ -2.07
MSH5YDL154W GZF3P42944 551 aaKnown RBP2.15□□□□□ -2.07
MSH5YDL154W PEX14P53112 341 aa2.15□□□□□ -2.07
MSH5YDL154W COX18P53239 316 aa2.15□□□□□ -2.07
MSH5YDL154W ORC3P54790 616 aa2.15□□□□□ -2.07
MSH5YDL154W GCN5Q03330 439 aa2.15□□□□□ -2.07
MSH5YDL154W YDR338CQ05497 695 aa2.15□□□□□ -2.07
MSH5YDL154W ACK1Q07622 623 aaPredicted RBP2.15□□□□□ -2.07
MSH5YDL154W YDL177CQ12257 170 aa2.15□□□□□ -2.07
MSH5YDL154W HIS5P07172 385 aa2.14□□□□□ -2.07
MSH5YDL154W HCA4P20448 770 aaKnown RBP2.14□□□□□ -2.07
Retrieved 100 of 5,963 RNA–protein pairs in 33.8 ms