RNA–Protein interactions for RNA: YDL043C

PRP11, Transcript of Subunit of the SF3a splicing factor complex, yeastyeast

Gene PRP11, Length 801 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRP11YDL043C YPL277CQ08989 487 aa4.45□□□□□ -1.7
PRP11YDL043C Q0142Q9ZZW4 58 aa4.45□□□□□ -1.7
PRP11YDL043C PET111P08468 800 aa4.44□□□□□ -1.7
PRP11YDL043C MSB1P21339 1137 aaKnown RBP4.44□□□□□ -1.7
PRP11YDL043C RPD3P32561 433 aa4.44□□□□□ -1.7
PRP11YDL043C SER1P33330 395 aaKnown RBP4.44□□□□□ -1.7
PRP11YDL043C FLR1P38124 548 aa4.44□□□□□ -1.7
PRP11YDL043C SVL3Q03088 825 aaKnown RBP4.44□□□□□ -1.7
PRP11YDL043C RSM24Q03976 319 aa4.44□□□□□ -1.7
PRP11YDL043C SIZ1Q04195 904 aa4.44□□□□□ -1.7
PRP11YDL043C TMA64Q04600 565 aaKnown RBP4.44□□□□□ -1.7
PRP11YDL043C DCS2Q12123 353 aa4.44□□□□□ -1.7
PRP11YDL043C HAL9Q12180 1030 aa4.44□□□□□ -1.7
PRP11YDL043C RIB2Q12362 591 aaKnown RBP4.44□□□□□ -1.7
PRP11YDL043C NOP56Q12460 504 aaKnown RBP RIP-Chip data4.44□□□□□ -1.7not detected
PRP11YDL043C FBP1P09201 348 aa4.43□□□□□ -1.7
PRP11YDL043C SEC65P29478 273 aa4.43□□□□□ -1.7
PRP11YDL043C YKU70P32807 602 aa4.43□□□□□ -1.7
PRP11YDL043C MRS6P32864 603 aaKnown RBP4.43□□□□□ -1.7
PRP11YDL043C MFT1P33441 392 aaKnown RBP4.43□□□□□ -1.7
PRP11YDL043C POA1P38218 177 aa4.43□□□□□ -1.7
PRP11YDL043C FAT1P38225 669 aa4.43□□□□□ -1.7
PRP11YDL043C SAF1P38352 637 aa4.43□□□□□ -1.7
PRP11YDL043C YHL041WP38730 149 aa4.43□□□□□ -1.7
PRP11YDL043C YIL108WP40483 696 aaKnown RBP4.43□□□□□ -1.7
PRP11YDL043C HIS6P40545 261 aa4.43□□□□□ -1.7
PRP11YDL043C BFA1P47113 574 aa4.43□□□□□ -1.7
PRP11YDL043C TAN1P53072 289 aaPredicted RBP4.43□□□□□ -1.7
PRP11YDL043C PCL10P53124 433 aa4.43□□□□□ -1.7
PRP11YDL043C YGR012WP53206 393 aa4.43□□□□□ -1.7
PRP11YDL043C DUS1P53759 423 aaKnown RBP4.43□□□□□ -1.7
PRP11YDL043C CNM67P53865 581 aaKnown RBP4.43□□□□□ -1.7
PRP11YDL043C SSL1Q04673 461 aaPredicted RBP4.43□□□□□ -1.7
PRP11YDL043C PSR2Q07949 397 aa4.43□□□□□ -1.7
PRP11YDL043C PFK1P16861 987 aaKnown RBP4.42□□□□□ -1.7
PRP11YDL043C PGM1P33401 570 aaKnown RBP4.42□□□□□ -1.7
PRP11YDL043C YKL222CP35995 705 aa4.42□□□□□ -1.7
PRP11YDL043C KTR4P38131 464 aa4.42□□□□□ -1.7
PRP11YDL043C YMR124WP39523 943 aaKnown RBP4.42□□□□□ -1.7
PRP11YDL043C SEC27P41811 889 aaKnown RBP4.42□□□□□ -1.7
PRP11YDL043C YJR039WP47107 1121 aa4.42□□□□□ -1.7
PRP11YDL043C RNR4P49723 345 aaKnown RBP4.42□□□□□ -1.7
PRP11YDL043C RCF1Q03713 159 aa4.42□□□□□ -1.7
PRP11YDL043C SSY1Q03770 852 aa4.42□□□□□ -1.7
PRP11YDL043C ECM38Q05902 660 aaPredicted RBP4.42□□□□□ -1.7
PRP11YDL043C NSI1Q12457 570 aa4.42□□□□□ -1.7
PRP11YDL043C NOP58Q12499 511 aaKnown RBP4.42□□□□□ -1.7
PRP11YDL043C SWI6P09959 803 aa4.41□□□□□ -1.7
PRP11YDL043C DAL5P15365 543 aa4.41□□□□□ -1.7
PRP11YDL043C HCA4P20448 770 aaKnown RBP4.41□□□□□ -1.7
PRP11YDL043C COQ2P32378 372 aa4.41□□□□□ -1.7
PRP11YDL043C SSZ1P38788 538 aaKnown RBP4.41□□□□□ -1.7
PRP11YDL043C ZRG8P40021 1076 aa4.41□□□□□ -1.7
PRP11YDL043C DJP1P40564 432 aa4.41□□□□□ -1.7
PRP11YDL043C PSP2P50109 593 aaKnown RBP4.41□□□□□ -1.7
PRP11YDL043C GIR2Q03768 265 aaPredicted RBP4.41□□□□□ -1.7
PRP11YDL043C MSS18P08593 268 aa4.4□□□□□ -1.71
PRP11YDL043C CHS2P14180 963 aa4.4□□□□□ -1.71
PRP11YDL043C ADP1P25371 1049 aa4.4□□□□□ -1.71
PRP11YDL043C BEM4P39011 633 aa4.4□□□□□ -1.71
PRP11YDL043C ACA1P39970 489 aa4.4□□□□□ -1.71
PRP11YDL043C SEC9P40357 651 aa4.4□□□□□ -1.71
PRP11YDL043C QRI7P43122 407 aa4.4□□□□□ -1.71
PRP11YDL043C SSY5P47002 699 aa4.4□□□□□ -1.71
PRP11YDL043C AVT1P47082 602 aa4.4□□□□□ -1.71
PRP11YDL043C HOL1P53389 586 aa4.4□□□□□ -1.71
PRP11YDL043C BRE5P53741 515 aaKnown RBP4.4□□□□□ -1.71
PRP11YDL043C ARP4P80428 489 aa4.4□□□□□ -1.71
PRP11YDL043C GPD1Q00055 391 aaKnown RBP4.4□□□□□ -1.71
PRP11YDL043C PKH1Q03407 766 aa4.4□□□□□ -1.71
PRP11YDL043C APA1P16550 321 aaKnown RBP4.39□□□□□ -1.71
PRP11YDL043C ATP12P22135 325 aa4.39□□□□□ -1.71
PRP11YDL043C DBF20P32328 564 aa4.39□□□□□ -1.71
PRP11YDL043C LTV1P34078 463 aa4.39□□□□□ -1.71
PRP11YDL043C YKR075CP36155 307 aa4.39□□□□□ -1.71
PRP11YDL043C EXO84P38261 753 aa4.39□□□□□ -1.71
PRP11YDL043C MIP6P38760 659 aaKnown RBP4.39□□□□□ -1.71
PRP11YDL043C CTF8P38877 133 aa4.39□□□□□ -1.71
PRP11YDL043C VID27P40157 782 aa4.39□□□□□ -1.71
PRP11YDL043C FOL2P51601 243 aaKnown RBP4.39□□□□□ -1.71
PRP11YDL043C IMH1Q06704 911 aaKnown RBP4.39□□□□□ -1.71
PRP11YDL043C ETT1Q08421 412 aaKnown RBP4.39□□□□□ -1.71
PRP11YDL043C VTS1Q08831 523 aaKnown RBP RIP-Chip data4.39□□□□□ -1.71not detected
PRP11YDL043C YLR122CQ12312 125 aa4.39□□□□□ -1.71
PRP11YDL043C SPE1P08432 466 aa4.38□□□□□ -1.71
PRP11YDL043C PHO81P17442 1178 aa4.38□□□□□ -1.71
PRP11YDL043C HOP1P20050 605 aa4.38□□□□□ -1.71
PRP11YDL043C ATG19P35193 415 aa4.38□□□□□ -1.71
PRP11YDL043C AKL1P38080 1108 aaKnown RBP4.38□□□□□ -1.71
PRP11YDL043C YHR078WP38799 552 aa4.38□□□□□ -1.71
PRP11YDL043C SDP1P40479 209 aa4.38□□□□□ -1.71
PRP11YDL043C MND2P40577 368 aa4.38□□□□□ -1.71
PRP11YDL043C SAP185P40856 1058 aa4.38□□□□□ -1.71
PRP11YDL043C VPS4P52917 437 aa4.38□□□□□ -1.71
PRP11YDL043C CEG1Q01159 459 aaPredicted RBP4.38□□□□□ -1.71
PRP11YDL043C YOL114CQ12322 202 aa4.38□□□□□ -1.71
PRP11YDL043C LPX1Q12405 387 aaKnown RBP4.38□□□□□ -1.71
PRP11YDL043C GCD1P09032 578 aaPredicted RBP4.37□□□□□ -1.71
PRP11YDL043C CMP2P14747 604 aa4.37□□□□□ -1.71
PRP11YDL043C RPA135P22138 1203 aaKnown RBP4.37□□□□□ -1.71
Retrieved 100 of 5,963 RNA–protein pairs in 12.5 ms