RNA–Protein interactions for RNA: YDL003W

MCD1, Transcript of Essential alpha-kleisin subunit of the cohesin complex, yeastyeast

Gene MCD1, Length 1,701 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MCD1YDL003W PIN2Q12057 282 aa2.68□□□□□ -1.98
MCD1YDL003W RGT2Q12300 763 aa2.68□□□□□ -1.98
MCD1YDL003W YKL033W-AQ86ZR7 236 aa2.68□□□□□ -1.98
MCD1YDL003W ERG11P10614 530 aa2.68□□□□□ -1.98
MCD1YDL003W PYC1P11154 1178 aaKnown RBP2.68□□□□□ -1.98
MCD1YDL003W YUR1P26725 428 aa2.68□□□□□ -1.98
MCD1YDL003W NUG1P40010 520 aaKnown RBP2.68□□□□□ -1.98
MCD1YDL003W XBP1P40489 647 aa2.68□□□□□ -1.98
MCD1YDL003W YBP2P53169 641 aa2.68□□□□□ -1.98
MCD1YDL003W CHD1P32657 1468 aa2.67□□□□□ -1.98
MCD1YDL003W RPA135P22138 1203 aaKnown RBP2.67□□□□□ -1.98
MCD1YDL003W MVD1P32377 396 aaKnown RBP2.67□□□□□ -1.98
MCD1YDL003W IME2P32581 645 aa2.67□□□□□ -1.98
MCD1YDL003W PRS1P32895 427 aaKnown RBP2.67□□□□□ -1.98
MCD1YDL003W YBR184WP38299 523 aa2.67□□□□□ -1.98
MCD1YDL003W SFB3P38810 929 aa2.67□□□□□ -1.98
MCD1YDL003W CCT3P39077 534 aaKnown RBP2.67□□□□□ -1.98
MCD1YDL003W BAP3P41815 604 aa2.67□□□□□ -1.98
MCD1YDL003W STB2P46679 850 aa2.67□□□□□ -1.98
MCD1YDL003W BNA3P47039 444 aaKnown RBP2.67□□□□□ -1.98
MCD1YDL003W ATG4P53867 494 aa2.67□□□□□ -1.98
MCD1YDL003W PAF1P38351 445 aa2.66□□□□□ -1.98
MCD1YDL003W LTP1P40347 161 aa2.66□□□□□ -1.98
MCD1YDL003W SHR5P41912 237 aa2.66□□□□□ -1.98
MCD1YDL003W TAD1P53065 400 aa2.66□□□□□ -1.98
MCD1YDL003W MPS1P54199 764 aa2.66□□□□□ -1.98
MCD1YDL003W CTK1Q03957 528 aaKnown RBP2.66□□□□□ -1.98
MCD1YDL003W TDA5Q06417 326 aaKnown RBP2.66□□□□□ -1.98
MCD1YDL003W OSW1Q08692 278 aa2.66□□□□□ -1.98
MCD1YDL003W NOP58Q12499 511 aaKnown RBP2.66□□□□□ -1.98
MCD1YDL003W YLR149CQ99296 730 aa2.66□□□□□ -1.98
MCD1YDL003W IKI3Q06706 1349 aaKnown RBP2.66□□□□□ -1.98
MCD1YDL003W HSP82P02829 709 aaKnown RBP2.65□□□□□ -1.98
MCD1YDL003W NUP1P20676 1076 aa2.65□□□□□ -1.98
MCD1YDL003W YCL002CP25565 263 aa2.65□□□□□ -1.98
MCD1YDL003W SIC1P38634 284 aa2.65□□□□□ -1.98
MCD1YDL003W PAN2P53010 1115 aaPredicted RBP2.65□□□□□ -1.98
MCD1YDL003W TEX1P53851 422 aaKnown RBP2.65□□□□□ -1.98
MCD1YDL003W LRS4Q04087 347 aaKnown RBP2.65□□□□□ -1.98
MCD1YDL003W JIP5Q06214 492 aaPredicted RBP2.65□□□□□ -1.98
MCD1YDL003W UFD4P33202 1483 aa2.65□□□□□ -1.98
MCD1YDL003W SIR3P06701 978 aa2.65□□□□□ -1.99
MCD1YDL003W PET10P36139 283 aa2.65□□□□□ -1.99
MCD1YDL003W SET5P38890 526 aaKnown RBP2.65□□□□□ -1.99
MCD1YDL003W MSD1P15179 658 aaKnown RBP2.64□□□□□ -1.99
MCD1YDL003W STE5P32917 917 aa2.64□□□□□ -1.99
MCD1YDL003W MRK1P50873 501 aa2.64□□□□□ -1.99
MCD1YDL003W FMP30Q02883 468 aa2.64□□□□□ -1.99
MCD1YDL003W EAF1Q06337 982 aa2.64□□□□□ -1.99
MCD1YDL003W PGK1P00560 416 aaKnown RBP2.63□□□□□ -1.99
MCD1YDL003W UBS1P38290 277 aa2.63□□□□□ -1.99
MCD1YDL003W MUP3P38734 546 aa2.63□□□□□ -1.99
MCD1YDL003W NMD2P38798 1089 aaKnown RBP2.63□□□□□ -1.99
MCD1YDL003W SPF1P39986 1215 aaKnown RBP2.63□□□□□ -1.99
MCD1YDL003W BPL1P48445 690 aaPredicted RBP2.63□□□□□ -1.99
MCD1YDL003W ZDS1P50111 915 aaKnown RBP2.63□□□□□ -1.99
MCD1YDL003W MTL1P53214 551 aa2.63□□□□□ -1.99
MCD1YDL003W YDR514CQ04408 483 aa2.63□□□□□ -1.99
MCD1YDL003W XRN1P22147 1528 aaKnown RBP2.63□□□□□ -1.99
MCD1YDL003W ECM5Q03214 1411 aa2.63□□□□□ -1.99
MCD1YDL003W KCC4P25389 1037 aa2.62□□□□□ -1.99
MCD1YDL003W VAC8P39968 578 aa2.62□□□□□ -1.99
MCD1YDL003W SMC3P47037 1230 aa2.62□□□□□ -1.99
MCD1YDL003W PRP31P49704 494 aaPredicted RBP2.62□□□□□ -1.99
MCD1YDL003W UTP8P53276 713 aaKnown RBP2.62□□□□□ -1.99
MCD1YDL003W UBX5Q06682 500 aa2.62□□□□□ -1.99
MCD1YDL003W REH1Q06709 432 aa2.62□□□□□ -1.99
MCD1YDL003W SPO75Q07798 868 aa2.62□□□□□ -1.99
MCD1YDL003W THI21Q08975 551 aa2.62□□□□□ -1.99
MCD1YDL003W PLP2Q12017 286 aa2.62□□□□□ -1.99
MCD1YDL003W HBN1Q96VH4 193 aa2.62□□□□□ -1.99
MCD1YDL003W PHO11P35842 467 aa2.62□□□□□ -1.99
MCD1YDL003W GMH1P36125 273 aa2.62□□□□□ -1.99
MCD1YDL003W PHO12P38693 467 aa2.62□□□□□ -1.99
MCD1YDL003W FMO1P38866 432 aa2.62□□□□□ -1.99
MCD1YDL003W NUP60P39705 539 aa2.62□□□□□ -1.99
MCD1YDL003W ECM1P39715 212 aa2.62□□□□□ -1.99
MCD1YDL003W FMP25Q08023 583 aa2.62□□□□□ -1.99
MCD1YDL003W NOP8Q08287 484 aaPredicted RBP2.62□□□□□ -1.99
MCD1YDL003W ZRT2Q12436 422 aa2.62□□□□□ -1.99
MCD1YDL003W DIF1O13577 133 aa2.61□□□□□ -1.99
MCD1YDL003W ARE1P25628 610 aa2.61□□□□□ -1.99
MCD1YDL003W SPC110P32380 944 aa2.61□□□□□ -1.99
MCD1YDL003W CBF5P33322 483 aaKnown RBP RIP-Chip data2.61□□□□□ -1.99not detected
MCD1YDL003W EMC3P36039 253 aa2.61□□□□□ -1.99
MCD1YDL003W TRZ1P36159 838 aaPredicted RBP2.61□□□□□ -1.99
MCD1YDL003W APT2P36973 181 aa2.61□□□□□ -1.99
MCD1YDL003W PFD1P46988 109 aa2.61□□□□□ -1.99
MCD1YDL003W ZIP2P53061 704 aa2.61□□□□□ -1.99
MCD1YDL003W ADE5,7P07244 802 aaKnown RBP2.6□□□□□ -1.99
MCD1YDL003W ROX1P25042 368 aa2.6□□□□□ -1.99
MCD1YDL003W FUB1P25659 250 aa2.6□□□□□ -1.99
MCD1YDL003W RGT1P32862 1170 aa2.6□□□□□ -1.99
MCD1YDL003W OPY1P38271 328 aa2.6□□□□□ -1.99
MCD1YDL003W RSP5P39940 809 aaKnown RBP2.6□□□□□ -1.99
MCD1YDL003W ERP6P53198 216 aa2.6□□□□□ -1.99
MCD1YDL003W SPC98P53540 846 aa2.6□□□□□ -1.99
MCD1YDL003W SVF1Q05515 481 aa2.6□□□□□ -1.99
MCD1YDL003W USV1Q12132 391 aa2.6□□□□□ -1.99
MCD1YDL003W TRM732Q03496 1420 aa2.6□□□□□ -1.99
Retrieved 100 of 5,963 RNA–protein pairs in 7.5 ms