RNA–Protein interactions for RNA: YBR263W

SHM1, Transcript of Mitochondrial serine hydroxymethyltransferase, yeastyeast

Gene SHM1, Length 1,473 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHM1YBR263W VMS1Q04311 632 aaKnown RBP6.23□□□□□ -1.41
SHM1YBR263W ATG11Q12527 1178 aa6.23□□□□□ -1.41
SHM1YBR263W RTP1Q12751 981 aa6.23□□□□□ -1.41
SHM1YBR263W FKS1P38631 1876 aaKnown RBP6.22□□□□□ -1.41
SHM1YBR263W RPL22AP05749 121 aaKnown RBP6.22□□□□□ -1.41
SHM1YBR263W DED1P06634 604 aaKnown RBP6.22□□□□□ -1.41
SHM1YBR263W PFK1P16861 987 aaKnown RBP6.22□□□□□ -1.41
SHM1YBR263W RSC6P25632 483 aa6.22□□□□□ -1.41
SHM1YBR263W COQ2P32378 372 aa6.22□□□□□ -1.41
SHM1YBR263W ISC10P32645 267 aa6.22□□□□□ -1.41
SHM1YBR263W RPN3P40016 523 aaKnown RBP6.22□□□□□ -1.41
SHM1YBR263W RSM25P40496 264 aa6.22□□□□□ -1.41
SHM1YBR263W PSP2P50109 593 aaKnown RBP6.22□□□□□ -1.41
SHM1YBR263W ARK1P53974 638 aa6.22□□□□□ -1.41
SHM1YBR263W ROD1Q02805 837 aa6.22□□□□□ -1.41
SHM1YBR263W RSC2Q06488 889 aa6.22□□□□□ -1.41
SHM1YBR263W TY1A-NL1Q12391 440 aaKnown RBP6.22□□□□□ -1.41
SHM1YBR263W SNA3P14359 133 aa6.22□□□□□ -1.41
SHM1YBR263W UBC1P21734 215 aaKnown RBP6.22□□□□□ -1.41
SHM1YBR263W ROX1P25042 368 aa6.22□□□□□ -1.41
SHM1YBR263W PPS1P38148 807 aa6.22□□□□□ -1.41
SHM1YBR263W YIL165CP40446 119 aa6.22□□□□□ -1.41
SHM1YBR263W FYV10P40492 516 aa6.22□□□□□ -1.41
SHM1YBR263W SAD1P43589 448 aa6.22□□□□□ -1.41
SHM1YBR263W NCS2P53923 493 aaPredicted RBP6.22□□□□□ -1.41
SHM1YBR263W YML020WQ03722 664 aa6.22□□□□□ -1.41
SHM1YBR263W COQ9Q05779 260 aa6.22□□□□□ -1.41
SHM1YBR263W ECM30Q06673 1274 aa6.22□□□□□ -1.41
SHM1YBR263W YDL057WQ07379 328 aa6.22□□□□□ -1.41
SHM1YBR263W ETT1Q08421 412 aaKnown RBP6.22□□□□□ -1.41
SHM1YBR263W TAO3P40468 2376 aa6.21□□□□□ -1.41
SHM1YBR263W TRP3P00937 484 aa6.21□□□□□ -1.42
SHM1YBR263W TCP1P12612 559 aaKnown RBP6.21□□□□□ -1.42
SHM1YBR263W MSN1P22148 382 aa6.21□□□□□ -1.42
SHM1YBR263W EFT1P32324 842 aaKnown RBP6.21□□□□□ -1.42
SHM1YBR263W RPN12P32496 274 aa6.21□□□□□ -1.42
SHM1YBR263W SMY2P32909 740 aaKnown RBP6.21□□□□□ -1.42
SHM1YBR263W KAE1P36132 386 aa6.21□□□□□ -1.42
SHM1YBR263W YKR073CP36153 106 aa6.21□□□□□ -1.42
SHM1YBR263W ARL1P38116 183 aaKnown RBP6.21□□□□□ -1.42
SHM1YBR263W PPT1P53043 513 aa6.21□□□□□ -1.42
SHM1YBR263W EAF7P53911 425 aaKnown RBP6.21□□□□□ -1.42
SHM1YBR263W SMC5Q08204 1093 aa6.21□□□□□ -1.42
SHM1YBR263W YLR122CQ12312 125 aa6.21□□□□□ -1.42
SHM1YBR263W SAC6P32599 642 aaKnown RBP6.2□□□□□ -1.42
SHM1YBR263W NPR3P38742 1146 aa6.2□□□□□ -1.42
SHM1YBR263W ERC1P38767 581 aa6.2□□□□□ -1.42
SHM1YBR263W SNF7P39929 240 aaKnown RBP6.2□□□□□ -1.42
SHM1YBR263W EAF5P39995 279 aa6.2□□□□□ -1.42
SHM1YBR263W AVT1P47082 602 aa6.2□□□□□ -1.42
SHM1YBR263W CAF130P53280 1122 aaPredicted RBP6.2□□□□□ -1.42
SHM1YBR263W SEC5P89102 971 aa6.2□□□□□ -1.42
SHM1YBR263W VPS72Q03388 795 aa6.2□□□□□ -1.42
SHM1YBR263W PUN1Q06991 263 aa6.2□□□□□ -1.42
SHM1YBR263W NOC3Q07896 663 aaPredicted RBP6.2□□□□□ -1.42
SHM1YBR263W YDR524C-BQ3E6R4 66 aa6.2□□□□□ -1.42
SHM1YBR263W DUR3P33413 735 aa6.19□□□□□ -1.42
SHM1YBR263W ATG19P35193 415 aa6.19□□□□□ -1.42
SHM1YBR263W ACF4P47129 309 aa6.19□□□□□ -1.42
SHM1YBR263W AZR1P50080 613 aa6.19□□□□□ -1.42
SHM1YBR263W TOF1P53840 1238 aa6.19□□□□□ -1.42
SHM1YBR263W MED7Q08278 222 aa6.19□□□□□ -1.42
SHM1YBR263W AFT2Q08957 416 aa6.19□□□□□ -1.42
SHM1YBR263W HEM1P09950 548 aaPredicted RBP6.18□□□□□ -1.42
SHM1YBR263W DBP5P20449 482 aaKnown RBP6.18□□□□□ -1.42
SHM1YBR263W DAL7P21826 554 aa6.18□□□□□ -1.42
SHM1YBR263W GSY2P27472 705 aa6.18□□□□□ -1.42
SHM1YBR263W COT1P32798 439 aa6.18□□□□□ -1.42
SHM1YBR263W YEL1P34225 687 aa6.18□□□□□ -1.42
SHM1YBR263W INP51P40559 946 aaKnown RBP6.18□□□□□ -1.42
SHM1YBR263W HUL4P40985 892 aa6.18□□□□□ -1.42
SHM1YBR263W NBP1P52919 319 aaPredicted RBP6.18□□□□□ -1.42
SHM1YBR263W FMP30Q02883 468 aa6.18□□□□□ -1.42
SHM1YBR263W TLG2Q08144 397 aa6.18□□□□□ -1.42
SHM1YBR263W IES4Q08561 116 aa6.18□□□□□ -1.42
SHM1YBR263W YPL216WQ08964 1102 aa6.18□□□□□ -1.42
SHM1YBR263W YPL277CQ08989 487 aa6.18□□□□□ -1.42
SHM1YBR263W PCK1P10963 549 aa6.17□□□□□ -1.42
SHM1YBR263W NAM7P30771 971 aaKnown RBP6.17□□□□□ -1.42
SHM1YBR263W MSS51P32335 436 aa6.17□□□□□ -1.42
SHM1YBR263W YSC83P32792 385 aa6.17□□□□□ -1.42
SHM1YBR263W YKL091CP33324 310 aaKnown RBP6.17□□□□□ -1.42
SHM1YBR263W SAF1P38352 637 aa6.17□□□□□ -1.42
SHM1YBR263W TVP23P38962 199 aa6.17□□□□□ -1.42
SHM1YBR263W FIR1P40020 876 aa6.17□□□□□ -1.42
SHM1YBR263W ALD5P40047 520 aaKnown RBP6.17□□□□□ -1.42
SHM1YBR263W YGR237CP50089 785 aa6.17□□□□□ -1.42
SHM1YBR263W TAM41P53230 385 aa6.17□□□□□ -1.42
SHM1YBR263W RTT102P53330 157 aa6.17□□□□□ -1.42
SHM1YBR263W EMG1Q06287 252 aaKnown RBP6.17□□□□□ -1.42
SHM1YBR263W CUR1Q06469 252 aa6.17□□□□□ -1.42
SHM1YBR263W YOL075CQ08234 1294 aa6.17□□□□□ -1.42
SHM1YBR263W TCO89Q08921 799 aa6.17□□□□□ -1.42
SHM1YBR263W RPC53P25441 422 aa6.16□□□□□ -1.42
SHM1YBR263W PSO2P30620 661 aa6.16□□□□□ -1.42
SHM1YBR263W TMT1P32643 299 aa6.16□□□□□ -1.42
SHM1YBR263W MNN4P36044 1178 aa6.16□□□□□ -1.42
SHM1YBR263W UBP13P38187 747 aa6.16□□□□□ -1.42
SHM1YBR263W BCD1P38772 366 aa6.16□□□□□ -1.42
SHM1YBR263W IRC24P40580 263 aa6.16□□□□□ -1.42
Retrieved 100 of 5,963 RNA–protein pairs in 46.4 ms