RNA–Protein interactions for RNA: YAR007C

RFA1, Transcript of Subunit of heterotrimeric Replication Protein A (RPA), yeastyeast

Gene RFA1, Length 1,866 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RFA1YAR007C YKL050CP35736 922 aa5.78□□□□□ -1.48
RFA1YAR007C YHL049CP38722 271 aa5.78□□□□□ -1.48
RFA1YAR007C PAC1P39946 494 aaKnown RBP5.78□□□□□ -1.48
RFA1YAR007C YEL075CP39972 122 aa5.78□□□□□ -1.48
RFA1YAR007C YER189WP40104 122 aa5.78□□□□□ -1.48
RFA1YAR007C STB1P42845 420 aa5.78□□□□□ -1.48
RFA1YAR007C THI12P42883 340 aa5.78□□□□□ -1.48
RFA1YAR007C THI5P43534 340 aa5.78□□□□□ -1.48
RFA1YAR007C YFL064CP43540 174 aa5.78□□□□□ -1.48
RFA1YAR007C THI11P47183 340 aa5.78□□□□□ -1.48
RFA1YAR007C NOP15P53927 220 aaPredicted RBP5.78□□□□□ -1.48
RFA1YAR007C COG6P53959 839 aa5.78□□□□□ -1.48
RFA1YAR007C THI13Q07748 340 aa5.78□□□□□ -1.48
RFA1YAR007C CHS5Q12114 671 aaKnown RBP5.78□□□□□ -1.48
RFA1YAR007C RUP1Q12242 671 aa5.78□□□□□ -1.48
RFA1YAR007C YBL111CQ3E7Y5 667 aa5.78□□□□□ -1.48
RFA1YAR007C PEP5P12868 1029 aa5.77□□□□□ -1.49
RFA1YAR007C TOA1P32773 286 aa5.77□□□□□ -1.49
RFA1YAR007C BIM1P40013 344 aa5.77□□□□□ -1.49
RFA1YAR007C PDS1P40316 373 aaPredicted RBP5.77□□□□□ -1.49
RFA1YAR007C JEM1P40358 645 aa5.77□□□□□ -1.49
RFA1YAR007C ASE1P50275 885 aa5.77□□□□□ -1.49
RFA1YAR007C ALD6P54115 500 aaKnown RBP5.77□□□□□ -1.49
RFA1YAR007C RPM2Q02773 1202 aa5.77□□□□□ -1.49
RFA1YAR007C YMR196WQ04336 1088 aa5.77□□□□□ -1.49
RFA1YAR007C YMR018WQ04364 514 aa5.77□□□□□ -1.49
RFA1YAR007C AGE1Q04412 482 aa5.77□□□□□ -1.49
RFA1YAR007C DON1Q05610 365 aa5.77□□□□□ -1.49
RFA1YAR007C TOS4Q06266 489 aa5.77□□□□□ -1.49
RFA1YAR007C NSE1Q07913 336 aa5.77□□□□□ -1.49
RFA1YAR007C NFI1Q12216 726 aa5.77□□□□□ -1.49
RFA1YAR007C MAK16P10962 306 aaPredicted RBP5.77□□□□□ -1.49
RFA1YAR007C YAK1P14680 807 aa5.77□□□□□ -1.49
RFA1YAR007C ADY2P25613 283 aa5.77□□□□□ -1.49
RFA1YAR007C YKL133CP36066 463 aa5.77□□□□□ -1.49
RFA1YAR007C RPC37P36121 282 aa5.77□□□□□ -1.49
RFA1YAR007C YBP1P38315 674 aa5.77□□□□□ -1.49
RFA1YAR007C SAK1P38990 1142 aa5.77□□□□□ -1.49
RFA1YAR007C SET2P46995 733 aaKnown RBP5.77□□□□□ -1.49
RFA1YAR007C FMP33P46998 180 aa5.77□□□□□ -1.49
RFA1YAR007C RPA14P50106 137 aa5.77□□□□□ -1.49
RFA1YAR007C ORM1P53224 222 aa5.77□□□□□ -1.49
RFA1YAR007C RET3P53600 189 aa5.77□□□□□ -1.49
RFA1YAR007C YNL247WP53852 767 aaKnown RBP5.77□□□□□ -1.49
RFA1YAR007C OSH6Q02201 448 aa5.77□□□□□ -1.49
RFA1YAR007C YKR005CQ02203 525 aa5.77□□□□□ -1.49
RFA1YAR007C SHR3Q02774 210 aa5.77□□□□□ -1.49
RFA1YAR007C ACL4Q03771 387 aa5.77□□□□□ -1.49
RFA1YAR007C PPM1Q04081 328 aa5.77□□□□□ -1.49
RFA1YAR007C SXM1Q04175 944 aaKnown RBP5.77□□□□□ -1.49
RFA1YAR007C THI3Q07471 609 aa5.77□□□□□ -1.49
RFA1YAR007C YOR389WQ08912 624 aa5.77□□□□□ -1.49
RFA1YAR007C CDC53Q12018 815 aaKnown RBP5.77□□□□□ -1.49
RFA1YAR007C HIF1Q12373 385 aa5.77□□□□□ -1.49
RFA1YAR007C YPT6Q99260 215 aa5.77□□□□□ -1.49
RFA1YAR007C CYB2P00175 591 aa5.76□□□□□ -1.49
RFA1YAR007C SUI3P09064 285 aaKnown RBP5.76□□□□□ -1.49
RFA1YAR007C CBF1P17106 351 aa5.76□□□□□ -1.49
RFA1YAR007C SPO16P17122 198 aa5.76□□□□□ -1.49
RFA1YAR007C BLI1P35727 113 aa5.76□□□□□ -1.49
RFA1YAR007C GEF1P37020 779 aa5.76□□□□□ -1.49
RFA1YAR007C PPS1P38148 807 aa5.76□□□□□ -1.49
RFA1YAR007C MMS21P38632 267 aa5.76□□□□□ -1.49
RFA1YAR007C EMP47P43555 445 aa5.76□□□□□ -1.49
RFA1YAR007C TAF6P53040 516 aa5.76□□□□□ -1.49
RFA1YAR007C USE1P53146 245 aa5.76□□□□□ -1.49
RFA1YAR007C DRN1P53255 507 aaKnown RBP5.76□□□□□ -1.49
RFA1YAR007C TUB4P53378 473 aa5.76□□□□□ -1.49
RFA1YAR007C TIM11P81449 96 aaPredicted RBP5.76□□□□□ -1.49
RFA1YAR007C HPC2Q01448 625 aa5.76□□□□□ -1.49
RFA1YAR007C MUB1Q03162 620 aa5.76□□□□□ -1.49
RFA1YAR007C RGA2Q06407 1009 aa5.76□□□□□ -1.49
RFA1YAR007C ATG17Q06410 417 aa5.76□□□□□ -1.49
RFA1YAR007C TDA5Q06417 326 aaKnown RBP5.76□□□□□ -1.49
RFA1YAR007C MSB1P21339 1137 aaKnown RBP5.75□□□□□ -1.49
RFA1YAR007C PUF4P25339 888 aaKnown RBP RIP-Chip data5.75□□□□□ -1.49not detected
RFA1YAR007C KIP1P28742 1111 aa5.75□□□□□ -1.49
RFA1YAR007C EFT1P32324 842 aaKnown RBP5.75□□□□□ -1.49
RFA1YAR007C MET4P32389 672 aa5.75□□□□□ -1.49
RFA1YAR007C MRE11P32829 692 aa5.75□□□□□ -1.49
RFA1YAR007C BOI1P38041 980 aaKnown RBP5.75□□□□□ -1.49
RFA1YAR007C VHC1P38329 1120 aa5.75□□□□□ -1.49
RFA1YAR007C OAF1P39720 1047 aaPredicted RBP5.75□□□□□ -1.49
RFA1YAR007C CIT3P43635 486 aa5.75□□□□□ -1.49
RFA1YAR007C DSE4P53753 1117 aa5.75□□□□□ -1.49
RFA1YAR007C CBK1P53894 756 aa5.75□□□□□ -1.49
RFA1YAR007C SYH1Q02875 849 aaKnown RBP5.75□□□□□ -1.49
RFA1YAR007C MSH5Q12175 901 aa5.75□□□□□ -1.49
RFA1YAR007C IES3Q12345 250 aa5.75□□□□□ -1.49
RFA1YAR007C SCP160P06105 1222 aaKnown RBP RIP-Chip data5.75□□□□□ -1.49 RIP-Chip
RFA1YAR007C MOD5P07884 428 aa5.75□□□□□ -1.49
RFA1YAR007C YEL076C-AP0CX16 216 aa5.75□□□□□ -1.49
RFA1YAR007C YLR464WP0CX17 216 aa5.75□□□□□ -1.49
RFA1YAR007C EUG1P32474 517 aa5.75□□□□□ -1.49
RFA1YAR007C FRD1P32614 470 aaKnown RBP5.75□□□□□ -1.49
RFA1YAR007C TFC4P33339 1025 aa5.75□□□□□ -1.49
RFA1YAR007C KTR2P33550 425 aa5.75□□□□□ -1.49
RFA1YAR007C HES1P35843 434 aa5.75□□□□□ -1.49
RFA1YAR007C YKR078WP36158 585 aaKnown RBP5.75□□□□□ -1.49
RFA1YAR007C UBP13P38187 747 aa5.75□□□□□ -1.49
Retrieved 100 of 5,963 RNA–protein pairs in 72.3 ms