RNA–Protein interactions for RNA: YPL246C

RBD2, Transcript of Possible rhomboid protease, yeast

Gene RBD2, Length 789 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RBD2	YPL246C	HMI1	Q12039	706 aa		6.28	□□□□□ -1.4
RBD2	YPL246C	YOL098C	Q12496	1037 aa		6.28	□□□□□ -1.4
RBD2	YPL246C	FLO11	P08640	1367 aa		6.28	□□□□□ -1.4
RBD2	YPL246C	CDC37	P06101	506 aa	Known RBP	6.27	□□□□□ -1.41
RBD2	YPL246C	SPO11	P23179	398 aa		6.27	□□□□□ -1.41
RBD2	YPL246C	MRC1	P25588	1096 aa		6.27	□□□□□ -1.41
RBD2	YPL246C	RSC6	P25632	483 aa		6.27	□□□□□ -1.41
RBD2	YPL246C	RPC25	P35718	212 aa		6.27	□□□□□ -1.41
RBD2	YPL246C	MIP6	P38760	659 aa	Known RBP	6.27	□□□□□ -1.41
RBD2	YPL246C	BCD1	P38772	366 aa		6.27	□□□□□ -1.41
RBD2	YPL246C	RAD26	P40352	1085 aa		6.27	□□□□□ -1.41
RBD2	YPL246C	CCT8	P47079	568 aa	Known RBP	6.27	□□□□□ -1.41
RBD2	YPL246C	BOP3	P53958	396 aa		6.27	□□□□□ -1.41
RBD2	YPL246C	ERG5	P54781	538 aa		6.27	□□□□□ -1.41
RBD2	YPL246C	EBS1	Q03466	884 aa	Known RBP	6.27	□□□□□ -1.41
RBD2	YPL246C	VPS38	Q05919	439 aa		6.27	□□□□□ -1.41
RBD2	YPL246C	RRP15	Q06511	250 aa	Predicted RBP	6.27	□□□□□ -1.41
RBD2	YPL246C	YPL216W	Q08964	1102 aa		6.27	□□□□□ -1.41
RBD2	YPL246C	WRS1	Q12109	432 aa	Known RBP	6.27	□□□□□ -1.41
RBD2	YPL246C	ATG9	Q12142	997 aa		6.27	□□□□□ -1.41
RBD2	YPL246C	NBL1	Q3E7Y6	73 aa		6.27	□□□□□ -1.41
RBD2	YPL246C	YKL068W-A	Q3E826	78 aa		6.27	□□□□□ -1.41
RBD2	YPL246C	CIT1	P00890	479 aa		6.26	□□□□□ -1.41
RBD2	YPL246C	SEC23	P15303	768 aa	Known RBP	6.26	□□□□□ -1.41
RBD2	YPL246C	SPO12	P17123	173 aa		6.26	□□□□□ -1.41
RBD2	YPL246C	SMY1	P32364	656 aa	Known RBP	6.26	□□□□□ -1.41
RBD2	YPL246C	SPT8	P38915	602 aa		6.26	□□□□□ -1.41
RBD2	YPL246C	SHU2	P38957	223 aa		6.26	□□□□□ -1.41
RBD2	YPL246C	STT3	P39007	718 aa	Known RBP	6.26	□□□□□ -1.41
RBD2	YPL246C	SHQ1	P40486	507 aa	Predicted RBP	6.26	□□□□□ -1.41
RBD2	YPL246C	PIP2	P52960	996 aa		6.26	□□□□□ -1.41
RBD2	YPL246C	ARI1	P53111	347 aa	Known RBP	6.26	□□□□□ -1.41
RBD2	YPL246C	ALF1	P53904	254 aa		6.26	□□□□□ -1.41
RBD2	YPL246C	RPT6	Q01939	405 aa	Known RBP	6.26	□□□□□ -1.41
RBD2	YPL246C	SPP382	Q06411	708 aa	Predicted RBP	6.26	□□□□□ -1.41
RBD2	YPL246C	IRC3	Q06683	689 aa		6.26	□□□□□ -1.41
RBD2	YPL246C	TLG2	Q08144	397 aa		6.26	□□□□□ -1.41
RBD2	YPL246C	YPL260W	Q08977	551 aa		6.26	□□□□□ -1.41
RBD2	YPL246C	CEX1	Q12453	761 aa		6.26	□□□□□ -1.41
RBD2	YPL246C	ERS1	P17261	260 aa		6.25	□□□□□ -1.41
RBD2	YPL246C	ACE2	P21192	770 aa		6.25	□□□□□ -1.41
RBD2	YPL246C	RAD57	P25301	460 aa		6.25	□□□□□ -1.41
RBD2	YPL246C	SAP190	P36123	1033 aa		6.25	□□□□□ -1.41
RBD2	YPL246C	REI1	P38344	393 aa	Predicted RBP	6.25	□□□□□ -1.41
RBD2	YPL246C	CTM1	P38818	585 aa		6.25	□□□□□ -1.41
RBD2	YPL246C	EFM4	P40516	257 aa		6.25	□□□□□ -1.41
RBD2	YPL246C	CIT3	P43635	486 aa		6.25	□□□□□ -1.41
RBD2	YPL246C	ALG2	P43636	503 aa		6.25	□□□□□ -1.41
RBD2	YPL246C	GCV1	P48015	400 aa		6.25	□□□□□ -1.41
RBD2	YPL246C	UBA2	P52488	636 aa		6.25	□□□□□ -1.41
RBD2	YPL246C	ULP1	Q02724	621 aa		6.25	□□□□□ -1.41
RBD2	YPL246C	SML1	Q04964	104 aa		6.25	□□□□□ -1.41
RBD2	YPL246C	ADY4	Q05955	493 aa		6.25	□□□□□ -1.41
RBD2	YPL246C	YAP7	Q08182	245 aa		6.25	□□□□□ -1.41
RBD2	YPL246C	MCA1	Q08601	432 aa		6.25	□□□□□ -1.41
RBD2	YPL246C	DSE3	Q08729	430 aa		6.25	□□□□□ -1.41
RBD2	YPL246C	CWC2	Q12046	339 aa	Predicted RBP	6.25	□□□□□ -1.41
RBD2	YPL246C	RRP6	Q12149	733 aa	Known RBP	6.25	□□□□□ -1.41
RBD2	YPL246C	TIP41	Q12199	356 aa		6.25	□□□□□ -1.41
RBD2	YPL246C	YLL054C	Q12244	843 aa		6.25	□□□□□ -1.41
RBD2	YPL246C	TUF1	P02992	437 aa	Known RBP	6.24	□□□□□ -1.41
RBD2	YPL246C	RET1	P22276	1149 aa	Known RBP	6.24	□□□□□ -1.41
RBD2	YPL246C	MSH1	P25846	959 aa		6.24	□□□□□ -1.41
RBD2	YPL246C	DPB3	P27344	201 aa		6.24	□□□□□ -1.41
RBD2	YPL246C	UGA4	P32837	571 aa		6.24	□□□□□ -1.41
RBD2	YPL246C	CAJ1	P39101	391 aa		6.24	□□□□□ -1.41
RBD2	YPL246C	VFA1	P40080	203 aa		6.24	□□□□□ -1.41
RBD2	YPL246C	GSM1	P42950	618 aa		6.24	□□□□□ -1.41
RBD2	YPL246C	YJR107W	P47145	328 aa		6.24	□□□□□ -1.41
RBD2	YPL246C	UME1	Q03010	460 aa		6.24	□□□□□ -1.41
RBD2	YPL246C	GYL1	Q04322	720 aa		6.24	□□□□□ -1.41
RBD2	YPL246C	SMD2	Q06217	110 aa	Known RBP	6.24	□□□□□ -1.41
RBD2	YPL246C	NOP14	Q99207	810 aa	Known RBP	6.24	□□□□□ -1.41
RBD2	YPL246C	MTF2	P10849	440 aa		6.23	□□□□□ -1.41
RBD2	YPL246C	THR4	P16120	514 aa	Known RBP	6.23	□□□□□ -1.41
RBD2	YPL246C	CHS3	P29465	1165 aa		6.23	□□□□□ -1.41
RBD2	YPL246C	PAP1	P29468	568 aa	Known RBP	6.23	□□□□□ -1.41
RBD2	YPL246C	YKL077W	P36081	392 aa		6.23	□□□□□ -1.41
RBD2	YPL246C	PET10	P36139	283 aa		6.23	□□□□□ -1.41
RBD2	YPL246C	PFF1	P38244	976 aa		6.23	□□□□□ -1.41
RBD2	YPL246C	FAA3	P39002	694 aa		6.23	□□□□□ -1.41
RBD2	YPL246C	VPS8	P39702	1274 aa		6.23	□□□□□ -1.41
RBD2	YPL246C	NDC80	P40460	691 aa		6.23	□□□□□ -1.41
RBD2	YPL246C	THI6	P41835	540 aa		6.23	□□□□□ -1.41
RBD2	YPL246C	RET3	P53600	189 aa		6.23	□□□□□ -1.41
RBD2	YPL246C	NCE103	P53615	221 aa		6.23	□□□□□ -1.41
RBD2	YPL246C	MDM1	Q01846	1127 aa		6.23	□□□□□ -1.41
RBD2	YPL246C	NOG1	Q02892	647 aa	Known RBP	6.23	□□□□□ -1.41
RBD2	YPL246C	YPL034W	Q03083	165 aa		6.23	□□□□□ -1.41
RBD2	YPL246C	ERO1	Q03103	563 aa		6.23	□□□□□ -1.41
RBD2	YPL246C	RBA50	Q04418	439 aa		6.23	□□□□□ -1.41
RBD2	YPL246C	KEL3	Q08979	651 aa	Predicted RBP	6.23	□□□□□ -1.41
RBD2	YPL246C	FKS1	P38631	1876 aa	Known RBP	6.22	□□□□□ -1.41
RBD2	YPL246C	QCR6	P00127	147 aa		6.22	□□□□□ -1.41
RBD2	YPL246C	RPS7A	P26786	190 aa	Known RBP	6.22	□□□□□ -1.41
RBD2	YPL246C	RPL8B	P29453	256 aa	Known RBP	6.22	□□□□□ -1.41
RBD2	YPL246C	EFM2	P38347	419 aa		6.22	□□□□□ -1.41
RBD2	YPL246C	SMF1	P38925	575 aa		6.22	□□□□□ -1.41
RBD2	YPL246C	IES1	P43579	692 aa		6.22	□□□□□ -1.41
RBD2	YPL246C	RSM26	P47141	266 aa		6.22	□□□□□ -1.41

Retrieved 100 of 5,963 RNA–protein pairs in 86.3 ms