RNA–Protein interactions for RNA: YOR329C

SCD5, Transcript of Protein required for normal actin organization and endocytosis, yeastyeast

Gene SCD5, Length 2,619 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SCD5YOR329C SVF1Q05515 481 aa2.52□□□□□ -2.01
SCD5YOR329C MDM20Q12387 796 aaKnown RBP2.52□□□□□ -2.01
SCD5YOR329C ERP3Q12403 225 aa2.52□□□□□ -2.01
SCD5YOR329C CDC8P00572 216 aa2.52□□□□□ -2.01
SCD5YOR329C CHS2P14180 963 aa2.52□□□□□ -2.01
SCD5YOR329C PSO2P30620 661 aa2.52□□□□□ -2.01
SCD5YOR329C LTV1P34078 463 aa2.52□□□□□ -2.01
SCD5YOR329C CCT4P39078 528 aaKnown RBP2.52□□□□□ -2.01
SCD5YOR329C BIM1P40013 344 aa2.52□□□□□ -2.01
SCD5YOR329C KAP123P40069 1113 aaKnown RBP2.52□□□□□ -2.01
SCD5YOR329C SCD6P45978 349 aaKnown RBP RIP-Chip data2.52□□□□□ -2.01not detected
SCD5YOR329C HFM1P51979 1187 aa2.52□□□□□ -2.01
SCD5YOR329C NBP1P52919 319 aaPredicted RBP2.52□□□□□ -2.01
SCD5YOR329C ATG1P53104 897 aa2.52□□□□□ -2.01
SCD5YOR329C HOP2P53187 214 aa2.52□□□□□ -2.01
SCD5YOR329C YGR273CP53329 174 aa2.52□□□□□ -2.01
SCD5YOR329C JJJ1P53863 590 aa2.52□□□□□ -2.01
SCD5YOR329C NOP13P53883 403 aaKnown RBP RIP-Chip data2.52□□□□□ -2.01not detected
SCD5YOR329C TIM8P57744 87 aa2.52□□□□□ -2.01
SCD5YOR329C PEX29Q03370 554 aa2.52□□□□□ -2.01
SCD5YOR329C COQ9Q05779 260 aa2.52□□□□□ -2.01
SCD5YOR329C OXR1Q08952 273 aa2.52□□□□□ -2.01
SCD5YOR329C NUR1Q12066 484 aa2.52□□□□□ -2.01
SCD5YOR329C YLL058WQ12198 575 aa2.52□□□□□ -2.01
SCD5YOR329C AHC1Q12433 566 aa2.52□□□□□ -2.01
SCD5YOR329C TRM11Q12463 433 aa2.52□□□□□ -2.01
SCD5YOR329C YPR117WQ06116 2489 aa2.51□□□□□ -2.01
SCD5YOR329C PPR1P07272 904 aaPredicted RBP2.51□□□□□ -2.01
SCD5YOR329C RPB2P08518 1224 aaKnown RBP2.51□□□□□ -2.01
SCD5YOR329C HEM1P09950 548 aaPredicted RBP2.51□□□□□ -2.01
SCD5YOR329C PMS1P14242 873 aa2.51□□□□□ -2.01
SCD5YOR329C RPO26P20435 155 aa2.51□□□□□ -2.01
SCD5YOR329C YDJ1P25491 409 aaKnown RBP2.51□□□□□ -2.01
SCD5YOR329C SEC65P29478 273 aa2.51□□□□□ -2.01
SCD5YOR329C RAD54P32863 898 aa2.51□□□□□ -2.01
SCD5YOR329C STO1P34160 861 aaKnown RBP2.51□□□□□ -2.01
SCD5YOR329C MRX3P38172 270 aa2.51□□□□□ -2.01
SCD5YOR329C REG2P38232 338 aa2.51□□□□□ -2.01
SCD5YOR329C MMS4P38257 691 aa2.51□□□□□ -2.01
SCD5YOR329C RCK2P38623 610 aa2.51□□□□□ -2.01
SCD5YOR329C PIH1P38768 344 aa2.51□□□□□ -2.01
SCD5YOR329C YAP1801P38856 637 aa2.51□□□□□ -2.01
SCD5YOR329C DAS1P47005 663 aa2.51□□□□□ -2.01
SCD5YOR329C STR2P47164 639 aa2.51□□□□□ -2.01
SCD5YOR329C CUL3P53202 744 aa2.51□□□□□ -2.01
SCD5YOR329C RTT102P53330 157 aa2.51□□□□□ -2.01
SCD5YOR329C CUS1Q02554 436 aaPredicted RBP2.51□□□□□ -2.01
SCD5YOR329C ATG16Q03818 150 aa2.51□□□□□ -2.01
SCD5YOR329C NOP6Q07623 225 aaKnown RBP2.51□□□□□ -2.01
SCD5YOR329C MSC6Q08818 692 aaKnown RBP2.51□□□□□ -2.01
SCD5YOR329C FAL1Q12099 399 aaKnown RBP2.51□□□□□ -2.01
SCD5YOR329C PHR1P05066 565 aaKnown RBP RIP-Chip data2.51□□□□□ -2.01not detected
SCD5YOR329C ADE3P07245 946 aaKnown RBP2.51□□□□□ -2.01
SCD5YOR329C SAM1P10659 382 aaKnown RBP2.51□□□□□ -2.01
SCD5YOR329C KRS1P15180 591 aaKnown RBP2.51□□□□□ -2.01
SCD5YOR329C PRE10P21242 288 aaKnown RBP RIP-Chip data2.51□□□□□ -2.01not detected
SCD5YOR329C NAM7P30771 971 aaKnown RBP2.51□□□□□ -2.01
SCD5YOR329C BIO2P32451 375 aa2.51□□□□□ -2.01
SCD5YOR329C SWI3P32591 825 aa2.51□□□□□ -2.01
SCD5YOR329C MUD1P32605 298 aaKnown RBP2.51□□□□□ -2.01
SCD5YOR329C SMC1P32908 1225 aa2.51□□□□□ -2.01
SCD5YOR329C XRS2P33301 854 aa2.51□□□□□ -2.01
SCD5YOR329C UBP11P36026 717 aa2.51□□□□□ -2.01
SCD5YOR329C RPC37P36121 282 aa2.51□□□□□ -2.01
SCD5YOR329C YTA12P40341 825 aa2.51□□□□□ -2.01
SCD5YOR329C RPC17P47076 161 aa2.51□□□□□ -2.01
SCD5YOR329C PSP2P50109 593 aaKnown RBP2.51□□□□□ -2.01
SCD5YOR329C SSL2Q00578 843 aa2.51□□□□□ -2.01
SCD5YOR329C NGL3Q03210 505 aa2.51□□□□□ -2.01
SCD5YOR329C STE20Q03497 939 aaKnown RBP2.51□□□□□ -2.01
SCD5YOR329C VTI1Q04338 217 aa2.51□□□□□ -2.01
SCD5YOR329C DUS3Q06053 668 aaKnown RBP2.51□□□□□ -2.01
SCD5YOR329C MLH2Q07980 695 aa2.51□□□□□ -2.01
SCD5YOR329C MPC54Q08550 464 aa2.51□□□□□ -2.01
SCD5YOR329C IES4Q08561 116 aa2.51□□□□□ -2.01
SCD5YOR329C CDC33P07260 213 aaKnown RBP2.5□□□□□ -2.01
SCD5YOR329C RPS6AP0CX37 236 aaKnown RBP2.5□□□□□ -2.01
SCD5YOR329C RPS6BP0CX38 236 aaPredicted RBP2.5□□□□□ -2.01
SCD5YOR329C YER152CP10356 443 aa2.5□□□□□ -2.01
SCD5YOR329C SUP45P12385 437 aaKnown RBP2.5□□□□□ -2.01
SCD5YOR329C PET123P17558 318 aa2.5□□□□□ -2.01
SCD5YOR329C PDC6P26263 563 aaKnown RBP2.5□□□□□ -2.01
SCD5YOR329C TRM2P33753 639 aa2.5□□□□□ -2.01
SCD5YOR329C SQT1P35184 431 aa2.5□□□□□ -2.01
SCD5YOR329C UIP5P36137 443 aa2.5□□□□□ -2.01
SCD5YOR329C NOP4P37838 685 aaKnown RBP2.5□□□□□ -2.01
SCD5YOR329C MMS21P38632 267 aa2.5□□□□□ -2.01
SCD5YOR329C EAF5P39995 279 aa2.5□□□□□ -2.01
SCD5YOR329C ATG3P40344 310 aa2.5□□□□□ -2.01
SCD5YOR329C MID1P41821 548 aa2.5□□□□□ -2.01
SCD5YOR329C BRE2P43132 505 aa2.5□□□□□ -2.01
SCD5YOR329C YJR039WP47107 1121 aa2.5□□□□□ -2.01
SCD5YOR329C KAP114P53067 1004 aa2.5□□□□□ -2.01
SCD5YOR329C BOP3P53958 396 aa2.5□□□□□ -2.01
SCD5YOR329C YML119WQ03208 357 aa2.5□□□□□ -2.01
SCD5YOR329C SUE1Q06524 206 aa2.5□□□□□ -2.01
SCD5YOR329C APL5Q08951 932 aaKnown RBP2.5□□□□□ -2.01
SCD5YOR329C SSD1P24276 1250 aaKnown RBP RIP-Chip data2.5□□□□□ -2.01not detected
SCD5YOR329C MSS51P32335 436 aa2.5□□□□□ -2.01
SCD5YOR329C GCG1P32656 232 aaKnown RBP2.5□□□□□ -2.01
Retrieved 100 of 5,963 RNA–protein pairs in 39.2 ms