RNA–Protein interactions for RNA: YNR015W

SMM1, Transcript of Dihydrouridine synthase, yeastyeast

Gene SMM1, Length 1,155 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SMM1YNR015W ASP3-4P0CX79 362 aa10.1□□□□□ -0.79
SMM1YNR015W ASP3-1P0CZ17 362 aa10.1□□□□□ -0.79
SMM1YNR015W SSB1P11484 613 aaKnown RBP10.1□□□□□ -0.79
SMM1YNR015W BIO2P32451 375 aa10.1□□□□□ -0.79
SMM1YNR015W TRM2P33753 639 aa10.1□□□□□ -0.79
SMM1YNR015W RPC25P35718 212 aa10.1□□□□□ -0.79
SMM1YNR015W MRPL7P36519 292 aa10.1□□□□□ -0.79
SMM1YNR015W SSB2P40150 613 aaKnown RBP10.1□□□□□ -0.79
SMM1YNR015W DAS1P47005 663 aa10.1□□□□□ -0.79
SMM1YNR015W YMR1P47147 688 aaKnown RBP RIP-Chip data10.1□□□□□ -0.79not detected
SMM1YNR015W SPO75Q07798 868 aa10.1□□□□□ -0.79
SMM1YNR015W OSH2Q12451 1283 aa10.1□□□□□ -0.79
SMM1YNR015W IME1P21190 360 aa10.09□□□□□ -0.79
SMM1YNR015W APL1P27351 700 aa10.09□□□□□ -0.79
SMM1YNR015W APN2P38207 520 aa10.09□□□□□ -0.79
SMM1YNR015W EFM2P38347 419 aa10.09□□□□□ -0.79
SMM1YNR015W CTM1P38818 585 aa10.09□□□□□ -0.79
SMM1YNR015W FTR1P40088 404 aa10.09□□□□□ -0.79
SMM1YNR015W TFG2P41896 400 aaPredicted RBP10.09□□□□□ -0.79
SMM1YNR015W PNG1Q02890 363 aa10.09□□□□□ -0.79
SMM1YNR015W EEB1Q02891 456 aa10.09□□□□□ -0.79
SMM1YNR015W SLX4Q12098 748 aa10.09□□□□□ -0.79
SMM1YNR015W NAT1P12945 854 aaKnown RBP10.08□□□□□ -0.8
SMM1YNR015W ADK2P26364 225 aa10.08□□□□□ -0.8
SMM1YNR015W CYS3P31373 394 aaKnown RBP10.08□□□□□ -0.8
SMM1YNR015W MRPL10P36520 322 aa10.08□□□□□ -0.8
SMM1YNR015W PTC4P38089 393 aa10.08□□□□□ -0.8
SMM1YNR015W RFS1P38234 210 aaKnown RBP10.08□□□□□ -0.8
SMM1YNR015W MIP6P38760 659 aaKnown RBP10.08□□□□□ -0.8
SMM1YNR015W FMP10P40098 244 aa10.08□□□□□ -0.8
SMM1YNR015W STB4P50104 949 aa10.08□□□□□ -0.8
SMM1YNR015W TBF1Q02457 562 aa10.08□□□□□ -0.8
SMM1YNR015W CWC21Q03375 135 aaKnown RBP10.08□□□□□ -0.8
SMM1YNR015W DNL4Q08387 944 aaPredicted RBP10.08□□□□□ -0.8
SMM1YNR015W CTF3Q12748 733 aa10.08□□□□□ -0.8
SMM1YNR015W SCJ1P25303 377 aa10.07□□□□□ -0.8
SMM1YNR015W SWI3P32591 825 aa10.07□□□□□ -0.8
SMM1YNR015W YKL023WP36103 277 aaKnown RBP10.07□□□□□ -0.8
SMM1YNR015W HEL1P36113 551 aa10.07□□□□□ -0.8
SMM1YNR015W SAP190P36123 1033 aa10.07□□□□□ -0.8
SMM1YNR015W SHM1P37292 490 aaPredicted RBP10.07□□□□□ -0.8
SMM1YNR015W YHR202WP38887 602 aa10.07□□□□□ -0.8
SMM1YNR015W COS5P47187 383 aa10.07□□□□□ -0.8
SMM1YNR015W MET13P53128 600 aa10.07□□□□□ -0.8
SMM1YNR015W UBP3Q01477 912 aaKnown RBP RIP-Chip data10.07□□□□□ -0.8not detected
SMM1YNR015W SNU56Q03782 492 aaKnown RBP10.07□□□□□ -0.8
SMM1YNR015W YLR297WQ05899 129 aa10.07□□□□□ -0.8
SMM1YNR015W RGA2Q06407 1009 aa10.07□□□□□ -0.8
SMM1YNR015W PUS1Q12211 544 aaKnown RBP10.07□□□□□ -0.8
SMM1YNR015W PKH2Q12236 1081 aaKnown RBP10.07□□□□□ -0.8
SMM1YNR015W GIS3Q12418 502 aa10.07□□□□□ -0.8
SMM1YNR015W PRC1P00729 532 aa10.06□□□□□ -0.8
SMM1YNR015W RPS6AP0CX37 236 aaKnown RBP10.06□□□□□ -0.8
SMM1YNR015W RPS6BP0CX38 236 aaPredicted RBP10.06□□□□□ -0.8
SMM1YNR015W CDC42P19073 191 aa10.06□□□□□ -0.8
SMM1YNR015W RAD54P32863 898 aa10.06□□□□□ -0.8
SMM1YNR015W YHR054CP38780 354 aa10.06□□□□□ -0.8
SMM1YNR015W SPT8P38915 602 aa10.06□□□□□ -0.8
SMM1YNR015W XDJ1P39102 459 aa10.06□□□□□ -0.8
SMM1YNR015W YFL052WP43551 465 aa10.06□□□□□ -0.8
SMM1YNR015W RPA49Q01080 415 aaPredicted RBP10.06□□□□□ -0.8
SMM1YNR015W LCD1Q04377 747 aa10.06□□□□□ -0.8
SMM1YNR015W CDD1Q06549 142 aa10.06□□□□□ -0.8
SMM1YNR015W IWR1Q07532 353 aaPredicted RBP10.06□□□□□ -0.8
SMM1YNR015W ESC8Q08119 714 aa10.06□□□□□ -0.8
SMM1YNR015W CWC2Q12046 339 aaPredicted RBP10.06□□□□□ -0.8
SMM1YNR015W YDL206WQ12424 762 aa10.06□□□□□ -0.8
SMM1YNR015W SPT2P06843 333 aaPredicted RBP10.05□□□□□ -0.8
SMM1YNR015W SPO11P23179 398 aa10.05□□□□□ -0.8
SMM1YNR015W MSH3P25336 1018 aa10.05□□□□□ -0.8
SMM1YNR015W STS1P38637 319 aa10.05□□□□□ -0.8
SMM1YNR015W SPP1Q03012 353 aa10.05□□□□□ -0.8
SMM1YNR015W HEH2Q03281 663 aa10.05□□□□□ -0.8
SMM1YNR015W RCR2Q03446 210 aaKnown RBP10.05□□□□□ -0.8
SMM1YNR015W YPR148CQ06523 435 aa10.05□□□□□ -0.8
SMM1YNR015W CSR1Q06705 408 aaKnown RBP10.05□□□□□ -0.8
SMM1YNR015W IDI1P15496 288 aa10.04□□□□□ -0.8
SMM1YNR015W SEC21P32074 935 aaKnown RBP10.04□□□□□ -0.8
SMM1YNR015W PXL1P36166 706 aa10.04□□□□□ -0.8
SMM1YNR015W CCL1P37366 393 aa10.04□□□□□ -0.8
SMM1YNR015W FYV8P46949 817 aaKnown RBP10.04□□□□□ -0.8
SMM1YNR015W INP52P50942 1183 aa10.04□□□□□ -0.8
SMM1YNR015W REC8Q12188 680 aa10.04□□□□□ -0.8
SMM1YNR015W YDR034W-BQ6Q5X2 51 aa10.04□□□□□ -0.8
SMM1YNR015W YPR117WQ06116 2489 aa10.04□□□□□ -0.8
SMM1YNR015W HAP2P06774 265 aa10.03□□□□□ -0.8
SMM1YNR015W CIT2P08679 460 aa10.03□□□□□ -0.8
SMM1YNR015W POL3P15436 1097 aa10.03□□□□□ -0.8
SMM1YNR015W URK1P27515 501 aa10.03□□□□□ -0.8
SMM1YNR015W SEC65P29478 273 aa10.03□□□□□ -0.8
SMM1YNR015W CDC11P32458 415 aa10.03□□□□□ -0.8
SMM1YNR015W GCS1P35197 352 aa10.03□□□□□ -0.8
SMM1YNR015W KIC1P38692 1080 aa10.03□□□□□ -0.8
SMM1YNR015W STB5P38699 743 aa10.03□□□□□ -0.8
SMM1YNR015W YEL023CP39992 682 aa10.03□□□□□ -0.8
SMM1YNR015W FAF1P40546 346 aaPredicted RBP10.03□□□□□ -0.8
SMM1YNR015W POL31P46957 487 aa10.03□□□□□ -0.8
SMM1YNR015W CPR7P47103 393 aa10.03□□□□□ -0.8
SMM1YNR015W HFM1P51979 1187 aa10.03□□□□□ -0.8
SMM1YNR015W STP1Q00947 519 aa10.03□□□□□ -0.8
Retrieved 100 of 5,963 RNA–protein pairs in 34.4 ms