RNA–Protein interactions for RNA: YNL209W

SSB2, Transcript of Cytoplasmic ATPase that is a ribosome-associated molecular chaperone, yeast

Gene SSB2, Length 1,842 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SSB2	YNL209W	LSO1	Q3E827	93 aa		4.99	□□□□□ -1.61
SSB2	YNL209W	TOM1	Q03280	3268 aa		4.98	□□□□□ -1.61
SSB2	YNL209W	SWI6	P09959	803 aa		4.98	□□□□□ -1.61
SSB2	YNL209W	PHO8	P11491	566 aa		4.98	□□□□□ -1.61
SSB2	YNL209W	CLB1	P24868	471 aa		4.98	□□□□□ -1.61
SSB2	YNL209W	CBF2	P32504	956 aa		4.98	□□□□□ -1.61
SSB2	YNL209W	OCT1	P35999	772 aa		4.98	□□□□□ -1.61
SSB2	YNL209W	KDX1	P36005	433 aa		4.98	□□□□□ -1.61
SSB2	YNL209W	UBP13	P38187	747 aa		4.98	□□□□□ -1.61
SSB2	YNL209W	MVP1	P40959	511 aa	Known RBP	4.98	□□□□□ -1.61
SSB2	YNL209W	UBP15	P50101	1230 aa		4.98	□□□□□ -1.61
SSB2	YNL209W	YNL058C	P53947	316 aa		4.98	□□□□□ -1.61
SSB2	YNL209W	TIM8	P57744	87 aa		4.98	□□□□□ -1.61
SSB2	YNL209W	YML119W	Q03208	357 aa		4.98	□□□□□ -1.61
SSB2	YNL209W	YDR278C	Q05612	105 aa		4.98	□□□□□ -1.61
SSB2	YNL209W	SFH1	Q06168	426 aa		4.98	□□□□□ -1.61
SSB2	YNL209W	CSR1	Q06705	408 aa	Known RBP	4.98	□□□□□ -1.61
SSB2	YNL209W	NOC3	Q07896	663 aa	Predicted RBP	4.98	□□□□□ -1.61
SSB2	YNL209W	RMP1	Q12530	201 aa		4.98	□□□□□ -1.61
SSB2	YNL209W	RAD1	P06777	1100 aa		4.97	□□□□□ -1.61
SSB2	YNL209W	SSD1	P24276	1250 aa	Known RBP RIP-Chip data	4.97	□□□□□ -1.61	not detected
SSB2	YNL209W	YSC83	P32792	385 aa		4.97	□□□□□ -1.61
SSB2	YNL209W	ATG19	P35193	415 aa		4.97	□□□□□ -1.61
SSB2	YNL209W	YKL050C	P35736	922 aa		4.97	□□□□□ -1.61
SSB2	YNL209W	RPL17B	P46990	184 aa	Known RBP	4.97	□□□□□ -1.61
SSB2	YNL209W	KAP114	P53067	1004 aa		4.97	□□□□□ -1.61
SSB2	YNL209W	TAM41	P53230	385 aa		4.97	□□□□□ -1.61
SSB2	YNL209W	BTN2	P53286	410 aa		4.97	□□□□□ -1.61
SSB2	YNL209W	ZPR1	P53303	486 aa	Known RBP	4.97	□□□□□ -1.61
SSB2	YNL209W	POB3	Q04636	552 aa	Known RBP	4.97	□□□□□ -1.61
SSB2	YNL209W	DUS4	Q06063	367 aa		4.97	□□□□□ -1.61
SSB2	YNL209W	GUD1	Q07729	489 aa		4.97	□□□□□ -1.61
SSB2	YNL209W	TFB4	Q12004	338 aa		4.97	□□□□□ -1.61
SSB2	YNL209W	SGT2	Q12118	346 aa	Known RBP	4.97	□□□□□ -1.61
SSB2	YNL209W	RUD3	Q12234	484 aa	Known RBP	4.97	□□□□□ -1.61
SSB2	YNL209W	CDC31	P06704	161 aa	Known RBP	4.97	□□□□□ -1.61
SSB2	YNL209W	NAM7	P30771	971 aa	Known RBP	4.97	□□□□□ -1.61
SSB2	YNL209W	PSE1	P32337	1089 aa	Known RBP	4.97	□□□□□ -1.61
SSB2	YNL209W	MUD1	P32605	298 aa	Known RBP	4.97	□□□□□ -1.61
SSB2	YNL209W	STE5	P32917	917 aa		4.97	□□□□□ -1.61
SSB2	YNL209W	NUF2	P33895	451 aa		4.97	□□□□□ -1.61
SSB2	YNL209W	SWH1	P35845	1188 aa		4.97	□□□□□ -1.61
SSB2	YNL209W	TRZ1	P36159	838 aa	Predicted RBP	4.97	□□□□□ -1.61
SSB2	YNL209W	REG2	P38232	338 aa		4.97	□□□□□ -1.61
SSB2	YNL209W	GDT1	P38301	280 aa	Predicted RBP	4.97	□□□□□ -1.61
SSB2	YNL209W	RGD1	P38339	666 aa		4.97	□□□□□ -1.61
SSB2	YNL209W	PMC1	P38929	1173 aa	Predicted RBP	4.97	□□□□□ -1.61
SSB2	YNL209W	VPS53	P47061	822 aa		4.97	□□□□□ -1.61
SSB2	YNL209W	MSH6	Q03834	1242 aa		4.97	□□□□□ -1.61
SSB2	YNL209W	YDR338C	Q05497	695 aa		4.97	□□□□□ -1.61
SSB2	YNL209W	PUS5	Q06244	254 aa		4.97	□□□□□ -1.61
SSB2	YNL209W	CDC8	P00572	216 aa		4.96	□□□□□ -1.62
SSB2	YNL209W	TCP1	P12612	559 aa	Known RBP	4.96	□□□□□ -1.62
SSB2	YNL209W	VMA2	P16140	517 aa	Known RBP	4.96	□□□□□ -1.62
SSB2	YNL209W	RRN6	P32786	894 aa		4.96	□□□□□ -1.62
SSB2	YNL209W	NFU1	P32860	256 aa		4.96	□□□□□ -1.62
SSB2	YNL209W	RAD54	P32863	898 aa		4.96	□□□□□ -1.62
SSB2	YNL209W	CNS1	P33313	385 aa		4.96	□□□□□ -1.62
SSB2	YNL209W	EXO5	P38289	585 aa		4.96	□□□□□ -1.62
SSB2	YNL209W	VPS41	P38959	992 aa		4.96	□□□□□ -1.62
SSB2	YNL209W	SDS3	P40505	327 aa		4.96	□□□□□ -1.62
SSB2	YNL209W	IAH1	P41734	238 aa		4.96	□□□□□ -1.62
SSB2	YNL209W	BFA1	P47113	574 aa		4.96	□□□□□ -1.62
SSB2	YNL209W	BRO1	P48582	844 aa		4.96	□□□□□ -1.62
SSB2	YNL209W	YGR021W	P53212	290 aa		4.96	□□□□□ -1.62
SSB2	YNL209W	YNL247W	P53852	767 aa	Known RBP	4.96	□□□□□ -1.62
SSB2	YNL209W	SLD5	Q03406	294 aa		4.96	□□□□□ -1.62
SSB2	YNL209W	CWC15	Q03772	175 aa	Known RBP	4.96	□□□□□ -1.62
SSB2	YNL209W	VTI1	Q04338	217 aa		4.96	□□□□□ -1.62
SSB2	YNL209W	GPI13	Q07830	1017 aa		4.96	□□□□□ -1.62
SSB2	YNL209W	NUR1	Q12066	484 aa		4.96	□□□□□ -1.62
SSB2	YNL209W	ERP3	Q12403	225 aa		4.96	□□□□□ -1.62
SSB2	YNL209W	ZRT2	Q12436	422 aa		4.96	□□□□□ -1.62
SSB2	YNL209W	DED1	P06634	604 aa	Known RBP	4.95	□□□□□ -1.62
SSB2	YNL209W	RAD3	P06839	778 aa		4.95	□□□□□ -1.62
SSB2	YNL209W	IME1	P21190	360 aa		4.95	□□□□□ -1.62
SSB2	YNL209W	TKL1	P23254	680 aa	Known RBP	4.95	□□□□□ -1.62
SSB2	YNL209W	PER1	P25625	357 aa		4.95	□□□□□ -1.62
SSB2	YNL209W	RAD16	P31244	790 aa		4.95	□□□□□ -1.62
SSB2	YNL209W	BCH2	P36122	765 aa		4.95	□□□□□ -1.62
SSB2	YNL209W	MAD1	P40957	749 aa		4.95	□□□□□ -1.62
SSB2	YNL209W	FIG4	P42837	879 aa		4.95	□□□□□ -1.62
SSB2	YNL209W	CTK3	P46963	296 aa	Predicted RBP	4.95	□□□□□ -1.62
SSB2	YNL209W	COS5	P47187	383 aa		4.95	□□□□□ -1.62
SSB2	YNL209W	CLA4	P48562	842 aa		4.95	□□□□□ -1.62
SSB2	YNL209W	HSH155	P49955	971 aa	Known RBP	4.95	□□□□□ -1.62
SSB2	YNL209W	TIM11	P81449	96 aa	Predicted RBP	4.95	□□□□□ -1.62
SSB2	YNL209W	HEH2	Q03281	663 aa		4.95	□□□□□ -1.62
SSB2	YNL209W	TSR1	Q07381	788 aa	Known RBP	4.95	□□□□□ -1.62
SSB2	YNL209W	NOP6	Q07623	225 aa	Known RBP	4.95	□□□□□ -1.62
SSB2	YNL209W	ISA1	Q07821	250 aa	Predicted RBP	4.95	□□□□□ -1.62
SSB2	YNL209W	APC5	Q08683	685 aa		4.95	□□□□□ -1.62
SSB2	YNL209W	YOR223W	Q12015	292 aa		4.95	□□□□□ -1.62
SSB2	YNL209W	YDL206W	Q12424	762 aa		4.95	□□□□□ -1.62
SSB2	YNL209W	CDC33	P07260	213 aa	Known RBP	4.95	□□□□□ -1.62
SSB2	YNL209W	MSH1	P25846	959 aa		4.95	□□□□□ -1.62
SSB2	YNL209W	KIP1	P28742	1111 aa		4.95	□□□□□ -1.62
SSB2	YNL209W	GCG1	P32656	232 aa	Known RBP	4.95	□□□□□ -1.62
SSB2	YNL209W	IXR1	P33417	597 aa		4.95	□□□□□ -1.62
SSB2	YNL209W	PEX5	P35056	612 aa		4.95	□□□□□ -1.62

Retrieved 100 of 5,963 RNA–protein pairs in 96.6 ms