RNA–Protein interactions for RNA: YNL054W-B

YNL054W-B, Transcript of TyB Gag-Pol protein, yeastyeast

Gene YNL054W-B, Length 5,250 nt, Biotype pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YNL054W-BYNL054W-B SEA4P38164 1038 aa0.83□□□□□ -2.28
YNL054W-BYNL054W-B YBP2P53169 641 aa0.83□□□□□ -2.28
YNL054W-BYNL054W-B PEX19Q07418 342 aa0.83□□□□□ -2.28
YNL054W-BYNL054W-B GPI13Q07830 1017 aa0.83□□□□□ -2.28
YNL054W-BYNL054W-B MSL5Q12186 476 aaKnown RBP RIP-Chip data0.83□□□□□ -2.28not detected
YNL054W-BYNL054W-B DYN1P36022 4092 aa0.83□□□□□ -2.28
YNL054W-BYNL054W-B YOR1P53049 1477 aa0.83□□□□□ -2.28
YNL054W-BYNL054W-B FLP1P03870 423 aa0.82□□□□□ -2.28
YNL054W-BYNL054W-B SRD1P09007 221 aa0.82□□□□□ -2.28
YNL054W-BYNL054W-B MLS1P30952 554 aa0.82□□□□□ -2.28
YNL054W-BYNL054W-B YNL011CP53980 444 aa0.82□□□□□ -2.28
YNL054W-BYNL054W-B RSC4Q02206 625 aa0.82□□□□□ -2.28
YNL054W-BYNL054W-B EAR1Q03212 550 aa0.82□□□□□ -2.28
YNL054W-BYNL054W-B TMA46Q12000 345 aaKnown RBP0.82□□□□□ -2.28
YNL054W-BYNL054W-B CMR1Q12510 522 aaKnown RBP0.82□□□□□ -2.28
YNL054W-BYNL054W-B SNQ2P32568 1501 aaKnown RBP0.82□□□□□ -2.28
YNL054W-BYNL054W-B YMR084WA2P2R3 262 aa0.82□□□□□ -2.28
YNL054W-BYNL054W-B SRP40P32583 406 aaPredicted RBP0.82□□□□□ -2.28
YNL054W-BYNL054W-B ERT1P38140 529 aa0.82□□□□□ -2.28
YNL054W-BYNL054W-B MGE1P38523 228 aa0.82□□□□□ -2.28
YNL054W-BYNL054W-B CHA4P43634 648 aa0.82□□□□□ -2.28
YNL054W-BYNL054W-B ACF4P47129 309 aa0.82□□□□□ -2.28
YNL054W-BYNL054W-B GDE1Q02979 1223 aa0.82□□□□□ -2.28
YNL054W-BYNL054W-B MSC2Q03455 724 aa0.82□□□□□ -2.28
YNL054W-BYNL054W-B GFD1Q04839 188 aaKnown RBP0.82□□□□□ -2.28
YNL054W-BYNL054W-B BUD7Q08754 746 aa0.82□□□□□ -2.28
YNL054W-BYNL054W-B APC11Q12157 165 aa0.82□□□□□ -2.28
YNL054W-BYNL054W-B MCD1Q12158 566 aa0.82□□□□□ -2.28
YNL054W-BYNL054W-B MUP3P38734 546 aa0.82□□□□□ -2.28
YNL054W-BYNL054W-B SLS1P42900 643 aa0.82□□□□□ -2.28
YNL054W-BYNL054W-B BPL1P48445 690 aaPredicted RBP0.82□□□□□ -2.28
YNL054W-BYNL054W-B SPO20Q04359 397 aa0.82□□□□□ -2.28
YNL054W-BYNL054W-B FRT1Q99332 602 aa0.82□□□□□ -2.28
YNL054W-BYNL054W-B MYO4P32492 1471 aa0.82□□□□□ -2.28
YNL054W-BYNL054W-B TY4B-HP0C2J7 1802 aa0.82□□□□□ -2.28
YNL054W-BYNL054W-B RFA1P22336 621 aaKnown RBP0.82□□□□□ -2.28
YNL054W-BYNL054W-B OPT1P40897 799 aa0.82□□□□□ -2.28
YNL054W-BYNL054W-B SHE10P53075 577 aa0.82□□□□□ -2.28
YNL054W-BYNL054W-B NUT2Q06213 157 aa0.82□□□□□ -2.28
YNL054W-BYNL054W-B GDB1Q06625 1536 aa0.82□□□□□ -2.28
YNL054W-BYNL054W-B SEC8P32855 1065 aa0.81□□□□□ -2.28
YNL054W-BYNL054W-B UBX5Q06682 500 aa0.81□□□□□ -2.28
YNL054W-BYNL054W-B UTP10P42945 1769 aaKnown RBP0.81□□□□□ -2.28
YNL054W-BYNL054W-B NEM1P38757 446 aa0.81□□□□□ -2.28
YNL054W-BYNL054W-B THI6P41835 540 aa0.81□□□□□ -2.28
YNL054W-BYNL054W-B RGD2P43556 714 aa0.81□□□□□ -2.28
YNL054W-BYNL054W-B PKH1Q03407 766 aa0.81□□□□□ -2.28
YNL054W-BYNL054W-B YPR071WQ12346 211 aa0.81□□□□□ -2.28
YNL054W-BYNL054W-B ADE5,7P07244 802 aaKnown RBP0.81□□□□□ -2.28
YNL054W-BYNL054W-B SUV3P32580 737 aa0.81□□□□□ -2.28
YNL054W-BYNL054W-B PEX28P38848 579 aa0.81□□□□□ -2.28
YNL054W-BYNL054W-B ROK1P45818 564 aaPredicted RBP0.81□□□□□ -2.28
YNL054W-BYNL054W-B TEL2P53038 688 aa0.81□□□□□ -2.28
YNL054W-BYNL054W-B RAT1Q02792 1006 aaKnown RBP0.81□□□□□ -2.28
YNL054W-BYNL054W-B DNF1P32660 1571 aa0.81□□□□□ -2.28
YNL054W-BYNL054W-B SNF2P22082 1703 aa0.81□□□□□ -2.28
YNL054W-BYNL054W-B MET30P39014 640 aa0.81□□□□□ -2.28
YNL054W-BYNL054W-B MXR1P40029 184 aa0.81□□□□□ -2.28
YNL054W-BYNL054W-B YIL092WP40497 633 aa0.81□□□□□ -2.28
YNL054W-BYNL054W-B FMP30Q02883 468 aa0.81□□□□□ -2.28
YNL054W-BYNL054W-B TY4B-JP47024 1803 aa0.81□□□□□ -2.28
YNL054W-BYNL054W-B SDS24P38314 527 aa0.8□□□□□ -2.28
YNL054W-BYNL054W-B FAA3P39002 694 aa0.8□□□□□ -2.28
YNL054W-BYNL054W-B KCS1Q12494 1050 aa0.8□□□□□ -2.28
YNL054W-BYNL054W-B VMR1P38735 1592 aa0.8□□□□□ -2.28
YNL054W-BYNL054W-B TUB3P09734 445 aaKnown RBP0.8□□□□□ -2.28
YNL054W-BYNL054W-B GCS1P35197 352 aa0.8□□□□□ -2.28
YNL054W-BYNL054W-B YRO2P38079 344 aa0.8□□□□□ -2.28
YNL054W-BYNL054W-B YBR139WP38109 508 aa0.8□□□□□ -2.28
YNL054W-BYNL054W-B DED81P38707 554 aaKnown RBP0.8□□□□□ -2.28
YNL054W-BYNL054W-B SAD1P43589 448 aa0.8□□□□□ -2.28
YNL054W-BYNL054W-B CNN1P43618 361 aa0.8□□□□□ -2.28
YNL054W-BYNL054W-B YLR040CQ07988 224 aa0.8□□□□□ -2.28
YNL054W-BYNL054W-B NDD1Q08887 554 aa0.8□□□□□ -2.28
YNL054W-BYNL054W-B APC1P53886 1748 aa0.8□□□□□ -2.28
YNL054W-BYNL054W-B FKS3Q04952 1785 aa0.8□□□□□ -2.28
YNL054W-BYNL054W-B NUP1P20676 1076 aa0.8□□□□□ -2.28
YNL054W-BYNL054W-B SEC15P22224 910 aa0.8□□□□□ -2.28
YNL054W-BYNL054W-B PER1P25625 357 aa0.8□□□□□ -2.28
YNL054W-BYNL054W-B DUN1P39009 513 aa0.8□□□□□ -2.28
YNL054W-BYNL054W-B PZF1P39933 429 aa0.8□□□□□ -2.28
YNL054W-BYNL054W-B PAC2P39937 518 aa0.8□□□□□ -2.28
YNL054W-BYNL054W-B NOG1Q02892 647 aaKnown RBP0.8□□□□□ -2.28
YNL054W-BYNL054W-B ECM16Q04217 1267 aaKnown RBP0.8□□□□□ -2.28
YNL054W-BYNL054W-B SKI3P17883 1432 aaKnown RBP0.8□□□□□ -2.28
YNL054W-BYNL054W-B SNT2P53127 1403 aa0.8□□□□□ -2.28
YNL054W-BYNL054W-B PIH1P38768 344 aa0.8□□□□□ -2.28
YNL054W-BYNL054W-B MAM1P40065 302 aa0.8□□□□□ -2.28
YNL054W-BYNL054W-B GIS2P53849 153 aaKnown RBP RIP-Chip data0.8□□□□□ -2.28not detected
YNL054W-BYNL054W-B BOP3P53958 396 aa0.8□□□□□ -2.28
YNL054W-BYNL054W-B CRZ1P53968 678 aa0.8□□□□□ -2.28
YNL054W-BYNL054W-B SNF5P18480 905 aa0.8□□□□□ -2.28
YNL054W-BYNL054W-B ARE1P25628 610 aa0.8□□□□□ -2.28
YNL054W-BYNL054W-B AAR2P32357 355 aaPredicted RBP0.8□□□□□ -2.28
YNL054W-BYNL054W-B RAI1P53063 387 aaKnown RBP0.8□□□□□ -2.28
YNL054W-BYNL054W-B ROD1Q02805 837 aa0.8□□□□□ -2.28
YNL054W-BYNL054W-B BUD4P47136 1447 aa0.79□□□□□ -2.28
YNL054W-BYNL054W-B MSH3P25336 1018 aa0.79□□□□□ -2.28
YNL054W-BYNL054W-B YKR078WP36158 585 aaKnown RBP0.79□□□□□ -2.28
YNL054W-BYNL054W-B EXO5P38289 585 aa0.79□□□□□ -2.28
Retrieved 100 of 5,963 RNA–protein pairs in 32.4 ms