RNA–Protein interactions for RNA: YMR135C

GID8, Transcript of Subunit of GID Complex, binds strongly to central component Vid30p, yeastyeast

Gene GID8, Length 1,368 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
GID8YMR135C MPC54Q08550 464 aa9.38□□□□□ -0.91
GID8YMR135C PHR1P05066 565 aaKnown RBP RIP-Chip data9.37□□□□□ -0.91not detected
GID8YMR135C CLN3P13365 580 aa9.37□□□□□ -0.91
GID8YMR135C CHS2P14180 963 aa9.37□□□□□ -0.91
GID8YMR135C POL3P15436 1097 aa9.37□□□□□ -0.91
GID8YMR135C KAR3P17119 729 aa9.37□□□□□ -0.91
GID8YMR135C ESS1P22696 170 aa9.37□□□□□ -0.91
GID8YMR135C SUV3P32580 737 aa9.37□□□□□ -0.91
GID8YMR135C RAD5P32849 1169 aaPredicted RBP9.37□□□□□ -0.91
GID8YMR135C TFC4P33339 1025 aa9.37□□□□□ -0.91
GID8YMR135C TIF4631P39935 952 aaKnown RBP9.37□□□□□ -0.91
GID8YMR135C ILM1P47155 203 aa9.37□□□□□ -0.91
GID8YMR135C VPS4P52917 437 aa9.37□□□□□ -0.91
GID8YMR135C ALD6P54115 500 aaKnown RBP9.37□□□□□ -0.91
GID8YMR135C TIM8P57744 87 aa9.37□□□□□ -0.91
GID8YMR135C HOT1Q03213 719 aa9.37□□□□□ -0.91
GID8YMR135C ACM1Q08981 209 aa9.37□□□□□ -0.91
GID8YMR135C PUS1Q12211 544 aaKnown RBP9.37□□□□□ -0.91
GID8YMR135C RIB2Q12362 591 aaKnown RBP9.37□□□□□ -0.91
GID8YMR135C YDL206WQ12424 762 aa9.37□□□□□ -0.91
GID8YMR135C TUB2P02557 457 aaKnown RBP9.37□□□□□ -0.91
GID8YMR135C YKL222CP35995 705 aa9.37□□□□□ -0.91
GID8YMR135C UBP11P36026 717 aa9.37□□□□□ -0.91
GID8YMR135C PBP2P38151 413 aaKnown RBP RIP-Chip data9.37□□□□□ -0.91not detected
GID8YMR135C ATG36P46983 293 aa9.37□□□□□ -0.91
GID8YMR135C ATG1P53104 897 aa9.37□□□□□ -0.91
GID8YMR135C YPL109CQ02981 657 aa9.37□□□□□ -0.91
GID8YMR135C TMA64Q04600 565 aaKnown RBP9.37□□□□□ -0.91
GID8YMR135C PMA1P05030 918 aaKnown RBP9.36□□□□□ -0.91
GID8YMR135C SPT2P06843 333 aaPredicted RBP9.36□□□□□ -0.91
GID8YMR135C PRP4P20053 465 aaKnown RBP9.36□□□□□ -0.91
GID8YMR135C PUF4P25339 888 aaKnown RBP RIP-Chip data9.36□□□□□ -0.91not detected
GID8YMR135C ICL1P28240 557 aaPredicted RBP9.36□□□□□ -0.91
GID8YMR135C GLN1P32288 370 aaKnown RBP9.36□□□□□ -0.91
GID8YMR135C UBP13P38187 747 aa9.36□□□□□ -0.91
GID8YMR135C NCL1P38205 684 aaKnown RBP9.36□□□□□ -0.91
GID8YMR135C MSG5P38590 489 aa9.36□□□□□ -0.91
GID8YMR135C RPN3P40016 523 aaKnown RBP9.36□□□□□ -0.91
GID8YMR135C VHR2P40041 505 aa9.36□□□□□ -0.91
GID8YMR135C YJR142WP47173 342 aa9.36□□□□□ -0.91
GID8YMR135C MDR1P53258 950 aa9.36□□□□□ -0.91
GID8YMR135C SOL4P53315 255 aa9.36□□□□□ -0.91
GID8YMR135C CNM67P53865 581 aaKnown RBP9.36□□□□□ -0.91
GID8YMR135C GTR1Q00582 310 aa9.36□□□□□ -0.91
GID8YMR135C SHR3Q02774 210 aa9.36□□□□□ -0.91
GID8YMR135C TFB2Q02939 513 aa9.36□□□□□ -0.91
GID8YMR135C PRP3Q03338 469 aaPredicted RBP9.36□□□□□ -0.91
GID8YMR135C ATG16Q03818 150 aa9.36□□□□□ -0.91
GID8YMR135C DON1Q05610 365 aa9.36□□□□□ -0.91
GID8YMR135C YLR326WQ06170 240 aaKnown RBP9.36□□□□□ -0.91
GID8YMR135C RKM4Q12504 494 aa9.36□□□□□ -0.91
GID8YMR135C BAS1P22035 811 aa9.35□□□□□ -0.91
GID8YMR135C GPI10P30777 616 aa9.35□□□□□ -0.91
GID8YMR135C SWI3P32591 825 aa9.35□□□□□ -0.91
GID8YMR135C YSC83P32792 385 aa9.35□□□□□ -0.91
GID8YMR135C PTC3P34221 468 aaKnown RBP9.35□□□□□ -0.91
GID8YMR135C RPC37P36121 282 aa9.35□□□□□ -0.91
GID8YMR135C FIS1P40515 155 aa9.35□□□□□ -0.91
GID8YMR135C TDA5Q06417 326 aaKnown RBP9.35□□□□□ -0.91
GID8YMR135C CDC33P07260 213 aaKnown RBP9.34□□□□□ -0.91
GID8YMR135C ILV2P07342 687 aaKnown RBP9.34□□□□□ -0.91
GID8YMR135C YML002WP0CF17 737 aa9.34□□□□□ -0.91
GID8YMR135C HEM15P16622 393 aa9.34□□□□□ -0.91
GID8YMR135C MVD1P32377 396 aaKnown RBP9.34□□□□□ -0.91
GID8YMR135C CDC11P32458 415 aa9.34□□□□□ -0.91
GID8YMR135C YBL055CP34220 418 aaPredicted RBP9.34□□□□□ -0.91
GID8YMR135C YBL086CP38177 466 aa9.34□□□□□ -0.91
GID8YMR135C YBR032WP38223 100 aa9.34□□□□□ -0.91
GID8YMR135C VHC1P38329 1120 aa9.34□□□□□ -0.91
GID8YMR135C YTA12P40341 825 aa9.34□□□□□ -0.91
GID8YMR135C ASG1P40467 964 aa9.34□□□□□ -0.91
GID8YMR135C YDR222WQ04925 415 aa9.34□□□□□ -0.91
GID8YMR135C PHM6Q05637 104 aa9.34□□□□□ -0.91
GID8YMR135C PUF3Q07807 879 aaKnown RBP RIP-Chip data9.34□□□□□ -0.91not detected
GID8YMR135C LDB19Q12502 818 aa9.34□□□□□ -0.91
GID8YMR135C TCP1P12612 559 aaKnown RBP9.33□□□□□ -0.92
GID8YMR135C CBF1P17106 351 aa9.33□□□□□ -0.92
GID8YMR135C SPO16P17122 198 aa9.33□□□□□ -0.92
GID8YMR135C DBF4P32325 704 aa9.33□□□□□ -0.92
GID8YMR135C KEL1P38853 1164 aaKnown RBP9.33□□□□□ -0.92
GID8YMR135C SSP1P38871 571 aa9.33□□□□□ -0.92
GID8YMR135C YGR111WP53265 400 aa9.33□□□□□ -0.92
GID8YMR135C YNL040WP53960 456 aaPredicted RBP9.33□□□□□ -0.92
GID8YMR135C KIN4Q01919 800 aa9.33□□□□□ -0.92
GID8YMR135C SLX4Q12098 748 aa9.33□□□□□ -0.92
GID8YMR135C PGK1P00560 416 aaKnown RBP9.32□□□□□ -0.92
GID8YMR135C GCR1P07261 785 aa9.32□□□□□ -0.92
GID8YMR135C SFL1P20134 766 aa9.32□□□□□ -0.92
GID8YMR135C IME1P21190 360 aa9.32□□□□□ -0.92
GID8YMR135C VAN1P23642 535 aa9.32□□□□□ -0.92
GID8YMR135C CLA4P48562 842 aa9.32□□□□□ -0.92
GID8YMR135C LIF1P53150 421 aa9.32□□□□□ -0.92
GID8YMR135C SHE9Q04172 456 aa9.32□□□□□ -0.92
GID8YMR135C ALR1Q08269 859 aa9.32□□□□□ -0.92
GID8YMR135C OSW1Q08692 278 aa9.32□□□□□ -0.92
GID8YMR135C SEC14P24280 304 aaKnown RBP9.31□□□□□ -0.92
GID8YMR135C RRN6P32786 894 aa9.31□□□□□ -0.92
GID8YMR135C TRM2P33753 639 aa9.31□□□□□ -0.92
GID8YMR135C PHO88P38264 188 aaPredicted RBP9.31□□□□□ -0.92
GID8YMR135C ZIP2P53061 704 aa9.31□□□□□ -0.92
Retrieved 100 of 5,963 RNA–protein pairs in 43.1 ms