RNA–Protein interactions for RNA: YLR250W

SSP120, Transcript of Protein of unknown function, yeastyeast

Gene SSP120, Length 705 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSP120YLR250W TRM2P33753 639 aa6.21□□□□□ -1.42
SSP120YLR250W YBR056WP38081 501 aa6.21□□□□□ -1.42
SSP120YLR250W MAL33P38157 468 aa6.21□□□□□ -1.42
SSP120YLR250W UBP13P38187 747 aa6.21□□□□□ -1.42
SSP120YLR250W RPS14BP39516 138 aaKnown RBP6.21□□□□□ -1.42
SSP120YLR250W SIP5P40210 489 aaKnown RBP6.21□□□□□ -1.42
SSP120YLR250W SCD6P45978 349 aaKnown RBP RIP-Chip data6.21□□□□□ -1.42not detected
SSP120YLR250W RTC4P53850 401 aa6.21□□□□□ -1.42
SSP120YLR250W YHM2Q04013 314 aa6.21□□□□□ -1.42
SSP120YLR250W UTP14Q04500 899 aaKnown RBP6.21□□□□□ -1.42
SSP120YLR250W COG8Q04632 607 aa6.21□□□□□ -1.42
SSP120YLR250W CDC53Q12018 815 aaKnown RBP6.21□□□□□ -1.42
SSP120YLR250W CTF3Q12748 733 aa6.21□□□□□ -1.42
SSP120YLR250W LAA1P39526 2014 aa6.21□□□□□ -1.42
SSP120YLR250W GAL80P04387 435 aa6.2□□□□□ -1.42
SSP120YLR250W PEP7P32609 515 aa6.2□□□□□ -1.42
SSP120YLR250W VPS35P34110 944 aa6.2□□□□□ -1.42
SSP120YLR250W DAK2P43550 591 aa6.2□□□□□ -1.42
SSP120YLR250W POL31P46957 487 aa6.2□□□□□ -1.42
SSP120YLR250W NBP1P52919 319 aaPredicted RBP6.2□□□□□ -1.42
SSP120YLR250W ADA2Q02336 434 aa6.2□□□□□ -1.42
SSP120YLR250W YPL216WQ08964 1102 aa6.2□□□□□ -1.42
SSP120YLR250W YPL277CQ08989 487 aa6.2□□□□□ -1.42
SSP120YLR250W HIS5P07172 385 aa6.19□□□□□ -1.42
SSP120YLR250W ASP3-2P0CX77 362 aa6.19□□□□□ -1.42
SSP120YLR250W ASP3-3P0CX78 362 aa6.19□□□□□ -1.42
SSP120YLR250W ASP3-4P0CX79 362 aa6.19□□□□□ -1.42
SSP120YLR250W ASP3-1P0CZ17 362 aa6.19□□□□□ -1.42
SSP120YLR250W SIR1P21691 654 aa6.19□□□□□ -1.42
SSP120YLR250W TRK2P28584 889 aa6.19□□□□□ -1.42
SSP120YLR250W VPH1P32563 840 aaKnown RBP6.19□□□□□ -1.42
SSP120YLR250W AGP2P38090 596 aa6.19□□□□□ -1.42
SSP120YLR250W DUG2P38149 878 aa6.19□□□□□ -1.42
SSP120YLR250W TGL3P40308 642 aa6.19□□□□□ -1.42
SSP120YLR250W NPA3P47122 385 aa6.19□□□□□ -1.42
SSP120YLR250W FAA4P47912 694 aaKnown RBP6.19□□□□□ -1.42
SSP120YLR250W HSH155P49955 971 aaKnown RBP6.19□□□□□ -1.42
SSP120YLR250W YGR130CP53278 816 aa6.19□□□□□ -1.42
SSP120YLR250W SFB2P53953 876 aa6.19□□□□□ -1.42
SSP120YLR250W LEE1Q02799 301 aaKnown RBP6.19□□□□□ -1.42
SSP120YLR250W LEA1Q08963 238 aaPredicted RBP6.19□□□□□ -1.42
SSP120YLR250W HRT3Q12347 344 aa6.19□□□□□ -1.42
SSP120YLR250W ACC1Q00955 2233 aaKnown RBP6.19□□□□□ -1.42
SSP120YLR250W FOB1O13329 566 aa6.18□□□□□ -1.42
SSP120YLR250W TRP2P00899 507 aaKnown RBP6.18□□□□□ -1.42
SSP120YLR250W PCK1P10963 549 aa6.18□□□□□ -1.42
SSP120YLR250W HCM1P25364 564 aa6.18□□□□□ -1.42
SSP120YLR250W RDS1P25611 832 aa6.18□□□□□ -1.42
SSP120YLR250W PRX1P34227 261 aaKnown RBP6.18□□□□□ -1.42
SSP120YLR250W MED6P38782 295 aa6.18□□□□□ -1.42
SSP120YLR250W BIM1P40013 344 aa6.18□□□□□ -1.42
SSP120YLR250W VTC2P43585 828 aa6.18□□□□□ -1.42
SSP120YLR250W HER2Q03557 464 aa6.18□□□□□ -1.42
SSP120YLR250W NSE5Q03718 556 aa6.18□□□□□ -1.42
SSP120YLR250W CUR1Q06469 252 aa6.18□□□□□ -1.42
SSP120YLR250W PHO8P11491 566 aa6.17□□□□□ -1.42
SSP120YLR250W PGI1P12709 554 aaKnown RBP6.17□□□□□ -1.42
SSP120YLR250W RPC31P17890 251 aa6.17□□□□□ -1.42
SSP120YLR250W KGD2P19262 463 aaPredicted RBP6.17□□□□□ -1.42
SSP120YLR250W VPS3P23643 1011 aa6.17□□□□□ -1.42
SSP120YLR250W MCM3P24279 971 aaKnown RBP6.17□□□□□ -1.42
SSP120YLR250W MUD1P32605 298 aaKnown RBP6.17□□□□□ -1.42
SSP120YLR250W ECM32P32644 1121 aaKnown RBP6.17□□□□□ -1.42
SSP120YLR250W SLA2P33338 968 aa6.17□□□□□ -1.42
SSP120YLR250W TBS1P38114 1094 aa6.17□□□□□ -1.42
SSP120YLR250W POL12P38121 705 aaPredicted RBP6.17□□□□□ -1.42
SSP120YLR250W KTR4P38131 464 aa6.17□□□□□ -1.42
SSP120YLR250W YHR054CP38780 354 aa6.17□□□□□ -1.42
SSP120YLR250W YFL034WP43564 1073 aa6.17□□□□□ -1.42
SSP120YLR250W FYV8P46949 817 aaKnown RBP6.17□□□□□ -1.42
SSP120YLR250W SHE10P53075 577 aa6.17□□□□□ -1.42
SSP120YLR250W CUE3P53137 624 aaKnown RBP6.17□□□□□ -1.42
SSP120YLR250W YNR061CP53747 219 aa6.17□□□□□ -1.42
SSP120YLR250W PEX19Q07418 342 aa6.17□□□□□ -1.42
SSP120YLR250W SDH5Q08230 162 aa6.17□□□□□ -1.42
SSP120YLR250W SAM3Q08986 587 aa6.17□□□□□ -1.42
SSP120YLR250W MEX67Q99257 599 aaKnown RBP6.17□□□□□ -1.42
SSP120YLR250W TPK1P06244 397 aa6.16□□□□□ -1.42
SSP120YLR250W IME1P21190 360 aa6.16□□□□□ -1.42
SSP120YLR250W CDC15P27636 974 aa6.16□□□□□ -1.42
SSP120YLR250W KIP1P28742 1111 aa6.16□□□□□ -1.42
SSP120YLR250W TTI1P36097 1038 aa6.16□□□□□ -1.42
SSP120YLR250W SFB3P38810 929 aa6.16□□□□□ -1.42
SSP120YLR250W LCB2P40970 561 aa6.16□□□□□ -1.42
SSP120YLR250W CCM1P48237 864 aaPredicted RBP6.16□□□□□ -1.42
SSP120YLR250W TMN2Q04562 672 aa6.16□□□□□ -1.42
SSP120YLR250W NSE1Q07913 336 aa6.16□□□□□ -1.42
SSP120YLR250W YPQ1Q12010 308 aa6.16□□□□□ -1.42
SSP120YLR250W PDH1Q12428 516 aaKnown RBP6.16□□□□□ -1.42
SSP120YLR250W RPL40AP0CH08 128 aaKnown RBP6.15□□□□□ -1.42
SSP120YLR250W RPL40BP0CH09 128 aaKnown RBP6.15□□□□□ -1.42
SSP120YLR250W SSB1P11484 613 aaKnown RBP6.15□□□□□ -1.42
SSP120YLR250W VMA1P17255 1071 aaKnown RBP6.15□□□□□ -1.42
SSP120YLR250W STE11P23561 717 aa6.15□□□□□ -1.42
SSP120YLR250W PIN4P34217 668 aaKnown RBP RIP-Chip data6.15□□□□□ -1.42not detected
SSP120YLR250W NPP2P39997 493 aa6.15□□□□□ -1.42
SSP120YLR250W SSB2P40150 613 aaKnown RBP6.15□□□□□ -1.42
SSP120YLR250W LSB6P42951 607 aa6.15□□□□□ -1.42
SSP120YLR250W CWC24P53769 259 aa6.15□□□□□ -1.42
SSP120YLR250W SEC5P89102 971 aa6.15□□□□□ -1.42
Retrieved 100 of 5,963 RNA–protein pairs in 14.7 ms