RNA–Protein interactions for RNA: YLR220W

CCC1, Transcript of Vacuolar Fe2+/Mn2+ transporter, yeastyeast

Gene CCC1, Length 969 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CCC1YLR220W ASP3-2P0CX77 362 aa16.75■□□□□ 0.27
CCC1YLR220W ASP3-3P0CX78 362 aa16.75■□□□□ 0.27
CCC1YLR220W ASP3-4P0CX79 362 aa16.75■□□□□ 0.27
CCC1YLR220W ASP3-1P0CZ17 362 aa16.75■□□□□ 0.27
CCC1YLR220W RPL4AP10664 362 aaKnown RBP16.75■□□□□ 0.27
CCC1YLR220W TUP1P16649 713 aa16.75■□□□□ 0.27
CCC1YLR220W CDC42P19073 191 aa16.75■□□□□ 0.27
CCC1YLR220W PRR1P28708 518 aa16.75■□□□□ 0.27
CCC1YLR220W TRM2P33753 639 aa16.75■□□□□ 0.27
CCC1YLR220W RPL4BP49626 362 aaKnown RBP16.75■□□□□ 0.27
CCC1YLR220W MAG2Q06436 670 aaKnown RBP16.75■□□□□ 0.27
CCC1YLR220W IWR1Q07532 353 aaPredicted RBP16.75■□□□□ 0.27
CCC1YLR220W IME1P21190 360 aa16.74■□□□□ 0.27
CCC1YLR220W KIP1P28742 1111 aa16.74■□□□□ 0.27
CCC1YLR220W SLX1P38324 304 aa16.74■□□□□ 0.27
CCC1YLR220W ESBP6P53918 673 aa16.74■□□□□ 0.27
CCC1YLR220W ALG11P53954 548 aaKnown RBP16.74■□□□□ 0.27
CCC1YLR220W BIO2P32451 375 aa16.73■□□□□ 0.27
CCC1YLR220W PTC4P38089 393 aa16.73■□□□□ 0.27
CCC1YLR220W TBF1Q02457 562 aa16.73■□□□□ 0.27
CCC1YLR220W UME1Q03010 460 aa16.73■□□□□ 0.27
CCC1YLR220W PPM1Q04081 328 aa16.73■□□□□ 0.27
CCC1YLR220W NEW1Q08972 1196 aaKnown RBP16.73■□□□□ 0.27
CCC1YLR220W ATG9Q12142 997 aa16.73■□□□□ 0.27
CCC1YLR220W PPR1P07272 904 aaPredicted RBP16.72■□□□□ 0.27
CCC1YLR220W RAD54P32863 898 aa16.72■□□□□ 0.27
CCC1YLR220W LEO1P38439 464 aa16.72■□□□□ 0.27
CCC1YLR220W YHR054CP38780 354 aa16.72■□□□□ 0.27
CCC1YLR220W ALT2P52892 507 aa16.72■□□□□ 0.27
CCC1YLR220W TAD1P53065 400 aa16.72■□□□□ 0.27
CCC1YLR220W RGA2Q06407 1009 aa16.72■□□□□ 0.27
CCC1YLR220W YPR078CQ06813 372 aa16.72■□□□□ 0.27
CCC1YLR220W YOR022CQ12204 715 aa16.72■□□□□ 0.27
CCC1YLR220W RSA4P25382 515 aaKnown RBP16.71■□□□□ 0.27
CCC1YLR220W CYS3P31373 394 aaKnown RBP16.71■□□□□ 0.27
CCC1YLR220W SPC110P32380 944 aa16.71■□□□□ 0.27
CCC1YLR220W ESL1P40456 1118 aa16.71■□□□□ 0.27
CCC1YLR220W CPR7P47103 393 aa16.71■□□□□ 0.27
CCC1YLR220W VPS70P47161 811 aa16.71■□□□□ 0.27
CCC1YLR220W SKY1Q03656 742 aa16.71■□□□□ 0.27
CCC1YLR220W RRP6Q12149 733 aaKnown RBP16.71■□□□□ 0.27
CCC1YLR220W CYC8P14922 966 aa16.7■□□□□ 0.26
CCC1YLR220W CAD1P24813 409 aaKnown RBP16.7■□□□□ 0.26
CCC1YLR220W XRS2P33301 854 aa16.7■□□□□ 0.26
CCC1YLR220W PUS1Q12211 544 aaKnown RBP16.7■□□□□ 0.26
CCC1YLR220W OSH2Q12451 1283 aa16.7■□□□□ 0.26
CCC1YLR220W COX11P19516 300 aaKnown RBP16.69■□□□□ 0.26
CCC1YLR220W CDC11P32458 415 aa16.69■□□□□ 0.26
CCC1YLR220W SMC1P32908 1225 aa16.69■□□□□ 0.26
CCC1YLR220W NIP100P33420 868 aa16.69■□□□□ 0.26
CCC1YLR220W YAP5P40574 245 aa16.69■□□□□ 0.26
CCC1YLR220W APL4Q12028 832 aa16.69■□□□□ 0.26
CCC1YLR220W SPO12P17123 173 aa16.68■□□□□ 0.26
CCC1YLR220W KIC1P38692 1080 aa16.68■□□□□ 0.26
CCC1YLR220W ERG5P54781 538 aa16.68■□□□□ 0.26
CCC1YLR220W DNL4Q08387 944 aaPredicted RBP16.68■□□□□ 0.26
CCC1YLR220W CTF3Q12748 733 aa16.68■□□□□ 0.26
CCC1YLR220W OPT1P40897 799 aa16.67■□□□□ 0.26
CCC1YLR220W SMC3P47037 1230 aa16.67■□□□□ 0.26
CCC1YLR220W CTR9P89105 1077 aa16.67■□□□□ 0.26
CCC1YLR220W STE20Q03497 939 aaKnown RBP16.67■□□□□ 0.26
CCC1YLR220W YLR455WQ06188 304 aa16.67■□□□□ 0.26
CCC1YLR220W PDC6P26263 563 aaKnown RBP16.66■□□□□ 0.26
CCC1YLR220W CSE2P33308 149 aa16.66■□□□□ 0.26
CCC1YLR220W SMC2P38989 1170 aaKnown RBP16.66■□□□□ 0.26
CCC1YLR220W EEB1Q02891 456 aa16.66■□□□□ 0.26
CCC1YLR220W CWC21Q03375 135 aaKnown RBP16.66■□□□□ 0.26
CCC1YLR220W YCG1Q06680 1035 aa16.66■□□□□ 0.26
CCC1YLR220W ABP140Q08641 628 aaKnown RBP16.66■□□□□ 0.26
CCC1YLR220W LAA1P39526 2014 aa16.65■□□□□ 0.26
CCC1YLR220W CSG2P35206 410 aa16.65■□□□□ 0.26
CCC1YLR220W MRPL7P36519 292 aa16.65■□□□□ 0.26
CCC1YLR220W MSC7P38694 644 aa16.65■□□□□ 0.26
CCC1YLR220W SAH1P39954 449 aaKnown RBP16.65■□□□□ 0.26
CCC1YLR220W BUD16P39988 312 aa16.65■□□□□ 0.26
CCC1YLR220W SHQ1P40486 507 aaPredicted RBP16.65■□□□□ 0.26
CCC1YLR220W HXT8P40886 569 aa16.65■□□□□ 0.26
CCC1YLR220W IES1P43579 692 aa16.65■□□□□ 0.26
CCC1YLR220W ALF1P53904 254 aa16.65■□□□□ 0.26
CCC1YLR220W SNU56Q03782 492 aaKnown RBP16.65■□□□□ 0.26
CCC1YLR220W CDD1Q06549 142 aa16.65■□□□□ 0.26
CCC1YLR220W AI5_BETAQ9ZZX0 354 aa16.65■□□□□ 0.26
CCC1YLR220W HIP1P06775 603 aa16.64■□□□□ 0.25
CCC1YLR220W RRT12P25381 491 aa16.64■□□□□ 0.25
CCC1YLR220W JHD1P40034 492 aa16.64■□□□□ 0.25
CCC1YLR220W KAP123P40069 1113 aaKnown RBP16.64■□□□□ 0.25
CCC1YLR220W ATG3P40344 310 aa16.64■□□□□ 0.25
CCC1YLR220W YML082WQ04533 649 aaKnown RBP16.64■□□□□ 0.25
CCC1YLR220W TRP2P00899 507 aaKnown RBP16.63■□□□□ 0.25
CCC1YLR220W MSD1P15179 658 aaKnown RBP16.63■□□□□ 0.25
CCC1YLR220W TRZ1P36159 838 aaPredicted RBP16.63■□□□□ 0.25
CCC1YLR220W MMM1P41800 426 aa16.63■□□□□ 0.25
CCC1YLR220W VPS38Q05919 439 aa16.63■□□□□ 0.25
CCC1YLR220W DAL2P25335 343 aa16.62■□□□□ 0.25
CCC1YLR220W CCC2P38995 1004 aa16.62■□□□□ 0.25
CCC1YLR220W ZAP1P47043 880 aa16.62■□□□□ 0.25
CCC1YLR220W STB4P50104 949 aa16.62■□□□□ 0.25
CCC1YLR220W NOP13P53883 403 aaKnown RBP RIP-Chip data16.62■□□□□ 0.25not detected
CCC1YLR220W CEF1Q03654 590 aaPredicted RBP16.62■□□□□ 0.25
CCC1YLR220W TSR1Q07381 788 aaKnown RBP16.62■□□□□ 0.25
Retrieved 100 of 5,963 RNA–protein pairs in 62.4 ms