RNA–Protein interactions for RNA: YKR092C

SRP40, Transcript of Nucleolar serine-rich protein, yeast

Gene SRP40, Length 1,221 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SRP40	YKR092C	RAI1	P53063	387 aa	Known RBP	4.63	□□□□□ -1.67
SRP40	YKR092C	RIM8	P53179	542 aa		4.63	□□□□□ -1.67
SRP40	YKR092C	NNF2	P53253	936 aa		4.63	□□□□□ -1.67
SRP40	YKR092C	DAM1	P53267	343 aa		4.63	□□□□□ -1.67
SRP40	YKR092C	YGR283C	P53336	341 aa	Predicted RBP	4.63	□□□□□ -1.67
SRP40	YKR092C	RCF1	Q03713	159 aa		4.63	□□□□□ -1.67
SRP40	YKR092C	NOP58	Q12499	511 aa	Known RBP	4.63	□□□□□ -1.67
SRP40	YKR092C	MDS3	P53094	1487 aa		4.62	□□□□□ -1.67
SRP40	YKR092C	MPH2	P0CD99	609 aa		4.62	□□□□□ -1.67
SRP40	YKR092C	SPC110	P32380	944 aa		4.62	□□□□□ -1.67
SRP40	YKR092C	POA1	P38218	177 aa		4.62	□□□□□ -1.67
SRP40	YKR092C	CEP3	P40969	608 aa		4.62	□□□□□ -1.67
SRP40	YKR092C	GCV2	P49095	1034 aa		4.62	□□□□□ -1.67
SRP40	YKR092C	MAL11	P53048	616 aa		4.62	□□□□□ -1.67
SRP40	YKR092C	ESF2	P53743	316 aa	Known RBP	4.62	□□□□□ -1.67
SRP40	YKR092C	YDR514C	Q04408	483 aa		4.62	□□□□□ -1.67
SRP40	YKR092C	TMA64	Q04600	565 aa	Known RBP	4.62	□□□□□ -1.67
SRP40	YKR092C	TPO1	Q07824	586 aa		4.62	□□□□□ -1.67
SRP40	YKR092C	MLP2	P40457	1679 aa		4.61	□□□□□ -1.67
SRP40	YKR092C	RPS13	P05756	151 aa	Known RBP	4.61	□□□□□ -1.67
SRP40	YKR092C	SPC29	P33419	253 aa		4.61	□□□□□ -1.67
SRP40	YKR092C	PEX6	P33760	1030 aa		4.61	□□□□□ -1.67
SRP40	YKR092C	STE13	P33894	931 aa		4.61	□□□□□ -1.67
SRP40	YKR092C	TOD6	P34219	525 aa		4.61	□□□□□ -1.67
SRP40	YKR092C	MNN1	P39106	762 aa		4.61	□□□□□ -1.67
SRP40	YKR092C	NOC2	P39744	710 aa	Known RBP	4.61	□□□□□ -1.67
SRP40	YKR092C	PEA2	P40091	420 aa		4.61	□□□□□ -1.67
SRP40	YKR092C	VPS27	P40343	622 aa	Known RBP	4.61	□□□□□ -1.67
SRP40	YKR092C	DJP1	P40564	432 aa		4.61	□□□□□ -1.67
SRP40	YKR092C	IES1	P43579	692 aa		4.61	□□□□□ -1.67
SRP40	YKR092C	MEH1	Q02205	184 aa		4.61	□□□□□ -1.67
SRP40	YKR092C	UGO1	Q03327	502 aa		4.61	□□□□□ -1.67
SRP40	YKR092C	GCN5	Q03330	439 aa		4.61	□□□□□ -1.67
SRP40	YKR092C	PKH1	Q03407	766 aa		4.61	□□□□□ -1.67
SRP40	YKR092C	DUS4	Q06063	367 aa		4.61	□□□□□ -1.67
SRP40	YKR092C	RXT3	Q07458	294 aa		4.61	□□□□□ -1.67
SRP40	YKR092C	GPB1	Q08886	897 aa		4.61	□□□□□ -1.67
SRP40	YKR092C	YPL277C	Q08989	487 aa		4.61	□□□□□ -1.67
SRP40	YKR092C	RPS9A	O13516	197 aa	Known RBP	4.6	□□□□□ -1.67
SRP40	YKR092C	SPE1	P08432	466 aa		4.6	□□□□□ -1.67
SRP40	YKR092C	URA1	P28272	314 aa	Predicted RBP	4.6	□□□□□ -1.67
SRP40	YKR092C	CYS3	P31373	394 aa	Known RBP	4.6	□□□□□ -1.67
SRP40	YKR092C	BLI1	P35727	113 aa		4.6	□□□□□ -1.67
SRP40	YKR092C	DSS1	P39112	969 aa		4.6	□□□□□ -1.67
SRP40	YKR092C	SPT20	P50875	604 aa		4.6	□□□□□ -1.67
SRP40	YKR092C	NOG2	P53742	486 aa	Known RBP	4.6	□□□□□ -1.67
SRP40	YKR092C	YDR341C	Q05506	607 aa	Known RBP	4.6	□□□□□ -1.67
SRP40	YKR092C	IMH1	Q06704	911 aa	Known RBP	4.6	□□□□□ -1.67
SRP40	YKR092C	ADY3	Q07732	790 aa		4.6	□□□□□ -1.67
SRP40	YKR092C	MET7	Q08645	548 aa		4.6	□□□□□ -1.67
SRP40	YKR092C	APL5	Q08951	932 aa	Known RBP	4.6	□□□□□ -1.67
SRP40	YKR092C	NOP56	Q12460	504 aa	Known RBP RIP-Chip data	4.6	□□□□□ -1.67	not detected
SRP40	YKR092C	MDM12	Q92328	271 aa		4.6	□□□□□ -1.67
SRP40	YKR092C	SOD2	P00447	233 aa		4.59	□□□□□ -1.67
SRP40	YKR092C	RPP2A	P05319	106 aa	Known RBP	4.59	□□□□□ -1.67
SRP40	YKR092C	DAL7	P21826	554 aa		4.59	□□□□□ -1.67
SRP40	YKR092C	GSY1	P23337	708 aa		4.59	□□□□□ -1.67
SRP40	YKR092C	RPD3	P32561	433 aa		4.59	□□□□□ -1.67
SRP40	YKR092C	TYE7	P33122	291 aa	Predicted RBP	4.59	□□□□□ -1.67
SRP40	YKR092C	TOM20	P35180	183 aa		4.59	□□□□□ -1.67
SRP40	YKR092C	ATG19	P35193	415 aa		4.59	□□□□□ -1.67
SRP40	YKR092C	YMR124W	P39523	943 aa	Known RBP	4.59	□□□□□ -1.67
SRP40	YKR092C	MET12	P46151	657 aa		4.59	□□□□□ -1.67
SRP40	YKR092C	HDA1	P53973	706 aa		4.59	□□□□□ -1.67
SRP40	YKR092C	YKR011C	Q02209	353 aa		4.59	□□□□□ -1.67
SRP40	YKR092C	ATP25	Q03153	612 aa		4.59	□□□□□ -1.67
SRP40	YKR092C	SSL1	Q04673	461 aa	Predicted RBP	4.59	□□□□□ -1.67
SRP40	YKR092C	REH1	Q06709	432 aa		4.59	□□□□□ -1.67
SRP40	YKR092C	ACK1	Q07622	623 aa	Predicted RBP	4.59	□□□□□ -1.67
SRP40	YKR092C	NTG2	Q08214	380 aa		4.59	□□□□□ -1.67
SRP40	YKR092C	PSK2	Q08217	1101 aa		4.59	□□□□□ -1.67
SRP40	YKR092C	ULS1	Q08562	1619 aa		4.59	□□□□□ -1.67
SRP40	YKR092C	CFT2	Q12102	859 aa	Predicted RBP	4.59	□□□□□ -1.67
SRP40	YKR092C	EMC1	P25574	760 aa		4.58	□□□□□ -1.68
SRP40	YKR092C	VBA3	P25594	458 aa		4.58	□□□□□ -1.68
SRP40	YKR092C	SEC9	P40357	651 aa		4.58	□□□□□ -1.68
SRP40	YKR092C	YIL108W	P40483	696 aa	Known RBP	4.58	□□□□□ -1.68
SRP40	YKR092C	AIM21	P40563	679 aa		4.58	□□□□□ -1.68
SRP40	YKR092C	CEF1	Q03654	590 aa	Predicted RBP	4.58	□□□□□ -1.68
SRP40	YKR092C	YDR132C	Q03900	495 aa		4.58	□□□□□ -1.68
SRP40	YKR092C	HMI1	Q12039	706 aa		4.58	□□□□□ -1.68
SRP40	YKR092C	VPS15	P22219	1454 aa		4.57	□□□□□ -1.68
SRP40	YKR092C	HIS5	P07172	385 aa		4.57	□□□□□ -1.68
SRP40	YKR092C	CDC6	P09119	513 aa		4.57	□□□□□ -1.68
SRP40	YKR092C	MEF1	P25039	761 aa		4.57	□□□□□ -1.68
SRP40	YKR092C	CDC20	P26309	610 aa		4.57	□□□□□ -1.68
SRP40	YKR092C	NPR3	P38742	1146 aa		4.57	□□□□□ -1.68
SRP40	YKR092C	VPS4	P52917	437 aa		4.57	□□□□□ -1.68
SRP40	YKR092C	TAD1	P53065	400 aa		4.57	□□□□□ -1.68
SRP40	YKR092C	PUS2	P53167	370 aa		4.57	□□□□□ -1.68
SRP40	YKR092C	VPS62	P53285	467 aa		4.57	□□□□□ -1.68
SRP40	YKR092C	UTP14	Q04500	899 aa	Known RBP	4.57	□□□□□ -1.68
SRP40	YKR092C	RSC3	Q06639	885 aa		4.57	□□□□□ -1.68
SRP40	YKR092C	NOP14	Q99207	810 aa	Known RBP	4.57	□□□□□ -1.68
SRP40	YKR092C	TY3B-G	Q99315	1547 aa		4.56	□□□□□ -1.68
SRP40	YKR092C	TY1B-DR3	Q99231	1755 aa		4.56	□□□□□ -1.68
SRP40	YKR092C	CDC9	P04819	755 aa		4.56	□□□□□ -1.68
SRP40	YKR092C	YCL002C	P25565	263 aa		4.56	□□□□□ -1.68
SRP40	YKR092C	PER1	P25625	357 aa		4.56	□□□□□ -1.68
SRP40	YKR092C	PWP2	P25635	923 aa	Known RBP	4.56	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 65.2 ms