RNA–Protein interactions for RNA: YJR060W

CBF1, Transcript of Basic helix-loop-helix (bHLH) protein, yeastyeast

Gene CBF1, Length 1,056 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CBF1YJR060W PIB2P53191 635 aa6.14□□□□□ -1.43
CBF1YJR060W EEB1Q02891 456 aa6.14□□□□□ -1.43
CBF1YJR060W MRD1Q06106 887 aaKnown RBP6.14□□□□□ -1.43
CBF1YJR060W EST2Q06163 884 aa6.14□□□□□ -1.43
CBF1YJR060W SPO75Q07798 868 aa6.14□□□□□ -1.43
CBF1YJR060W KEL3Q08979 651 aaPredicted RBP6.14□□□□□ -1.43
CBF1YJR060W DED1P06634 604 aaKnown RBP6.13□□□□□ -1.43
CBF1YJR060W TAF13P11747 167 aa6.13□□□□□ -1.43
CBF1YJR060W NFS1P25374 497 aa6.13□□□□□ -1.43
CBF1YJR060W SMY2P32909 740 aaKnown RBP6.13□□□□□ -1.43
CBF1YJR060W CST26P38226 397 aa6.13□□□□□ -1.43
CBF1YJR060W HSE1P38753 452 aa6.13□□□□□ -1.43
CBF1YJR060W KEL1P38853 1164 aaKnown RBP6.13□□□□□ -1.43
CBF1YJR060W MMM1P41800 426 aa6.13□□□□□ -1.43
CBF1YJR060W UTP14Q04500 899 aaKnown RBP6.13□□□□□ -1.43
CBF1YJR060W HDA2Q06629 674 aa6.13□□□□□ -1.43
CBF1YJR060W PPM2Q08282 695 aa6.13□□□□□ -1.43
CBF1YJR060W FLC1Q08967 793 aa6.13□□□□□ -1.43
CBF1YJR060W YLR125WQ12138 136 aa6.13□□□□□ -1.43
CBF1YJR060W OSH2Q12451 1283 aa6.13□□□□□ -1.43
CBF1YJR060W MYO1P08964 1928 aa6.13□□□□□ -1.43
CBF1YJR060W TOM1Q03280 3268 aa6.12□□□□□ -1.43
CBF1YJR060W MSB1P21339 1137 aaKnown RBP6.12□□□□□ -1.43
CBF1YJR060W YBR184WP38299 523 aa6.12□□□□□ -1.43
CBF1YJR060W YHR020WP38708 688 aaKnown RBP6.12□□□□□ -1.43
CBF1YJR060W YGR125WP53273 1036 aa6.12□□□□□ -1.43
CBF1YJR060W YGR130CP53278 816 aa6.12□□□□□ -1.43
CBF1YJR060W RKM2Q03942 479 aa6.12□□□□□ -1.43
CBF1YJR060W SPO20Q04359 397 aa6.12□□□□□ -1.43
CBF1YJR060W YDL124WQ07551 312 aaKnown RBP6.12□□□□□ -1.43
CBF1YJR060W RAD61Q99359 647 aa6.12□□□□□ -1.43
CBF1YJR060W PFK2P16862 959 aaKnown RBP RIP-Chip data6.11□□□□□ -1.43not detected
CBF1YJR060W SRM1P21827 482 aa6.11□□□□□ -1.43
CBF1YJR060W PRE8P23639 250 aa6.11□□□□□ -1.43
CBF1YJR060W WHI3P34761 661 aaKnown RBP6.11□□□□□ -1.43
CBF1YJR060W YBL028CP38202 106 aa6.11□□□□□ -1.43
CBF1YJR060W RSP5P39940 809 aaKnown RBP6.11□□□□□ -1.43
CBF1YJR060W CIT3P43635 486 aa6.11□□□□□ -1.43
CBF1YJR060W TUB2P02557 457 aaKnown RBP6.1□□□□□ -1.43
CBF1YJR060W COQ1P18900 473 aa6.1□□□□□ -1.43
CBF1YJR060W GAL11P19659 1081 aa6.1□□□□□ -1.43
CBF1YJR060W THI4P32318 326 aa6.1□□□□□ -1.43
CBF1YJR060W TOM20P35180 183 aa6.1□□□□□ -1.43
CBF1YJR060W OCT1P35999 772 aa6.1□□□□□ -1.43
CBF1YJR060W CRG1P38892 291 aaRIP-Chip data6.1□□□□□ -1.43not detected
CBF1YJR060W VID27P40157 782 aa6.1□□□□□ -1.43
CBF1YJR060W SPO22P40511 975 aa6.1□□□□□ -1.43
CBF1YJR060W GNP1P48813 663 aa6.1□□□□□ -1.43
CBF1YJR060W ALT1P52893 592 aa6.1□□□□□ -1.43
CBF1YJR060W ROD1Q02805 837 aa6.1□□□□□ -1.43
CBF1YJR060W RBA50Q04418 439 aa6.1□□□□□ -1.43
CBF1YJR060W SKG3Q06315 1026 aa6.1□□□□□ -1.43
CBF1YJR060W SPN1Q06505 410 aaPredicted RBP6.1□□□□□ -1.43
CBF1YJR060W MED7Q08278 222 aa6.1□□□□□ -1.43
CBF1YJR060W FKS1P38631 1876 aaKnown RBP6.09□□□□□ -1.43
CBF1YJR060W TRP2P00899 507 aaKnown RBP6.09□□□□□ -1.43
CBF1YJR060W TRP3P00937 484 aa6.09□□□□□ -1.43
CBF1YJR060W AGP1P25376 633 aa6.09□□□□□ -1.43
CBF1YJR060W GGA2P38817 585 aaKnown RBP6.09□□□□□ -1.43
CBF1YJR060W VPS8P39702 1274 aa6.09□□□□□ -1.43
CBF1YJR060W TIF4631P39935 952 aaKnown RBP6.09□□□□□ -1.43
CBF1YJR060W ACA1P39970 489 aa6.09□□□□□ -1.43
CBF1YJR060W VAB2P40003 282 aa6.09□□□□□ -1.43
CBF1YJR060W LYS14P40971 790 aa6.09□□□□□ -1.43
CBF1YJR060W YJR142WP47173 342 aa6.09□□□□□ -1.43
CBF1YJR060W YGL081WP53156 320 aa6.09□□□□□ -1.43
CBF1YJR060W DUS1P53759 423 aaKnown RBP6.09□□□□□ -1.43
CBF1YJR060W SIW14P53965 281 aa6.09□□□□□ -1.43
CBF1YJR060W RPS15Q01855 142 aaKnown RBP6.09□□□□□ -1.43
CBF1YJR060W EAR1Q03212 550 aa6.09□□□□□ -1.43
CBF1YJR060W RSA3Q05942 220 aaKnown RBP6.09□□□□□ -1.43
CBF1YJR060W YLR257WQ06146 321 aaKnown RBP6.09□□□□□ -1.43
CBF1YJR060W YOR059CQ08448 450 aaKnown RBP6.09□□□□□ -1.43
CBF1YJR060W CLF1Q12309 687 aaPredicted RBP6.09□□□□□ -1.43
CBF1YJR060W TUS1Q06412 1307 aa6.08□□□□□ -1.44
CBF1YJR060W CYC7P00045 113 aa6.08□□□□□ -1.44
CBF1YJR060W HSP60P19882 572 aaKnown RBP6.08□□□□□ -1.44
CBF1YJR060W PEP3P27801 918 aa6.08□□□□□ -1.44
CBF1YJR060W RPL8BP29453 256 aaKnown RBP6.08□□□□□ -1.44
CBF1YJR060W LYP1P32487 611 aa6.08□□□□□ -1.44
CBF1YJR060W ABD1P32783 436 aaPredicted RBP6.08□□□□□ -1.44
CBF1YJR060W STE5P32917 917 aa6.08□□□□□ -1.44
CBF1YJR060W MRP8P35719 219 aa6.08□□□□□ -1.44
CBF1YJR060W APE3P37302 537 aaKnown RBP6.08□□□□□ -1.44
CBF1YJR060W NMD3P38861 518 aaKnown RBP6.08□□□□□ -1.44
CBF1YJR060W PNT1P38969 423 aa6.08□□□□□ -1.44
CBF1YJR060W IRR1P40541 1150 aa6.08□□□□□ -1.44
CBF1YJR060W ALG2P43636 503 aa6.08□□□□□ -1.44
CBF1YJR060W NET1P47035 1189 aa6.08□□□□□ -1.44
CBF1YJR060W VPS53P47061 822 aa6.08□□□□□ -1.44
CBF1YJR060W TPP1Q03796 238 aa6.08□□□□□ -1.44
CBF1YJR060W SHE9Q04172 456 aa6.08□□□□□ -1.44
CBF1YJR060W NSI1Q12457 570 aa6.08□□□□□ -1.44
CBF1YJR060W ECM29P38737 1868 aa6.08□□□□□ -1.44
CBF1YJR060W SSB1P11484 613 aaKnown RBP6.07□□□□□ -1.44
CBF1YJR060W RIT1P23796 513 aa6.07□□□□□ -1.44
CBF1YJR060W SBA1P28707 216 aaKnown RBP6.07□□□□□ -1.44
CBF1YJR060W RER2P35196 286 aa6.07□□□□□ -1.44
CBF1YJR060W MYO3P36006 1272 aa6.07□□□□□ -1.44
CBF1YJR060W VBA5P36172 582 aa6.07□□□□□ -1.44
Retrieved 100 of 5,963 RNA–protein pairs in 14.2 ms