RNA–Protein interactions for RNA: YJL178C

ATG27, Transcript of Type I membrane protein involved in autophagy and the Cvt pathway, yeastyeast

Gene ATG27, Length 816 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ATG27YJL178C KIN4Q01919 800 aa4.53□□□□□ -1.68
ATG27YJL178C MET6P05694 767 aaKnown RBP4.52□□□□□ -1.69
ATG27YJL178C PFK1P16861 987 aaKnown RBP4.52□□□□□ -1.69
ATG27YJL178C DAL7P21826 554 aa4.52□□□□□ -1.69
ATG27YJL178C CHS7P38843 316 aa4.52□□□□□ -1.69
ATG27YJL178C PUS2P53167 370 aa4.52□□□□□ -1.69
ATG27YJL178C LRS4Q04087 347 aaKnown RBP4.52□□□□□ -1.69
ATG27YJL178C REH1Q06709 432 aa4.52□□□□□ -1.69
ATG27YJL178C MET7Q08645 548 aa4.52□□□□□ -1.69
ATG27YJL178C PER1P25625 357 aa4.51□□□□□ -1.69
ATG27YJL178C SPC29P33419 253 aa4.51□□□□□ -1.69
ATG27YJL178C TAD1P53065 400 aa4.51□□□□□ -1.69
ATG27YJL178C ATP25Q03153 612 aa4.51□□□□□ -1.69
ATG27YJL178C PNS1Q12412 539 aa4.51□□□□□ -1.69
ATG27YJL178C PEP1P32319 1579 aa4.5□□□□□ -1.69
ATG27YJL178C MEF1P25039 761 aa4.5□□□□□ -1.69
ATG27YJL178C MSH2P25847 964 aa4.5□□□□□ -1.69
ATG27YJL178C CYS3P31373 394 aaKnown RBP4.5□□□□□ -1.69
ATG27YJL178C AIM21P40563 679 aa4.5□□□□□ -1.69
ATG27YJL178C YDR514CQ04408 483 aa4.5□□□□□ -1.69
ATG27YJL178C SKI3P17883 1432 aaKnown RBP4.49□□□□□ -1.69
ATG27YJL178C CAD1P24813 409 aaKnown RBP4.49□□□□□ -1.69
ATG27YJL178C HRR25P29295 494 aaKnown RBP4.49□□□□□ -1.69
ATG27YJL178C SEC21P32074 935 aaKnown RBP4.49□□□□□ -1.69
ATG27YJL178C RRP14P36080 434 aaKnown RBP4.49□□□□□ -1.69
ATG27YJL178C YHR078WP38799 552 aa4.49□□□□□ -1.69
ATG27YJL178C DSS1P39112 969 aa4.49□□□□□ -1.69
ATG27YJL178C ERG5P54781 538 aa4.49□□□□□ -1.69
ATG27YJL178C NTG2Q08214 380 aa4.49□□□□□ -1.69
ATG27YJL178C AIM39Q08223 395 aa4.49□□□□□ -1.69
ATG27YJL178C MDS3P53094 1487 aa4.49□□□□□ -1.69
ATG27YJL178C MYO2P19524 1574 aaKnown RBP4.48□□□□□ -1.69
ATG27YJL178C CDC9P04819 755 aa4.48□□□□□ -1.69
ATG27YJL178C TUB3P09734 445 aaKnown RBP4.48□□□□□ -1.69
ATG27YJL178C PEX6P33760 1030 aa4.48□□□□□ -1.69
ATG27YJL178C NMD2P38798 1089 aaKnown RBP4.48□□□□□ -1.69
ATG27YJL178C DUS1P53759 423 aaKnown RBP4.48□□□□□ -1.69
ATG27YJL178C RSC3Q06639 885 aa4.48□□□□□ -1.69
ATG27YJL178C PEX19Q07418 342 aa4.48□□□□□ -1.69
ATG27YJL178C HAL9Q12180 1030 aa4.48□□□□□ -1.69
ATG27YJL178C YOR022CQ12204 715 aa4.48□□□□□ -1.69
ATG27YJL178C SWM1Q12379 170 aa4.48□□□□□ -1.69
ATG27YJL178C MDM12Q92328 271 aa4.48□□□□□ -1.69
ATG27YJL178C TRP4P07285 380 aaPredicted RBP4.47□□□□□ -1.69
ATG27YJL178C VBA3P25594 458 aa4.47□□□□□ -1.69
ATG27YJL178C POB3Q04636 552 aaKnown RBP4.47□□□□□ -1.69
ATG27YJL178C TRM11Q12463 433 aa4.47□□□□□ -1.69
ATG27YJL178C YPK9Q12697 1472 aa4.46□□□□□ -1.7
ATG27YJL178C PRC1P00729 532 aa4.46□□□□□ -1.7
ATG27YJL178C PRP4P20053 465 aaKnown RBP4.46□□□□□ -1.7
ATG27YJL178C EFT1P32324 842 aaKnown RBP4.46□□□□□ -1.7
ATG27YJL178C MTC2P34246 357 aa4.46□□□□□ -1.7
ATG27YJL178C SAP190P36123 1033 aa4.46□□□□□ -1.7
ATG27YJL178C SET5P38890 526 aaKnown RBP4.46□□□□□ -1.7
ATG27YJL178C HXT16P47185 567 aa4.46□□□□□ -1.7
ATG27YJL178C ZDS1P50111 915 aaKnown RBP4.46□□□□□ -1.7
ATG27YJL178C CTF4Q01454 927 aa4.46□□□□□ -1.7
ATG27YJL178C YLR040CQ07988 224 aa4.46□□□□□ -1.7
ATG27YJL178C TRM13Q12383 476 aa4.46□□□□□ -1.7
ATG27YJL178C KTR4P38131 464 aa4.45□□□□□ -1.7
ATG27YJL178C MNN1P39106 762 aa4.45□□□□□ -1.7
ATG27YJL178C UGO1Q03327 502 aa4.45□□□□□ -1.7
ATG27YJL178C THI21Q08975 551 aa4.45□□□□□ -1.7
ATG27YJL178C YBR182C-AQ8TGU6 64 aa4.45□□□□□ -1.7
ATG27YJL178C POL1P13382 1468 aa4.44□□□□□ -1.7
ATG27YJL178C NGG1P32494 702 aa4.44□□□□□ -1.7
ATG27YJL178C CTF13P35203 478 aa4.44□□□□□ -1.7
ATG27YJL178C MCD4P36051 919 aa4.44□□□□□ -1.7
ATG27YJL178C PZF1P39933 429 aa4.44□□□□□ -1.7
ATG27YJL178C RLP7P40693 322 aaKnown RBP4.44□□□□□ -1.7
ATG27YJL178C ALY2P47029 1046 aa4.44□□□□□ -1.7
ATG27YJL178C ASI2P53895 289 aa4.44□□□□□ -1.7
ATG27YJL178C YDR338CQ05497 695 aa4.44□□□□□ -1.7
ATG27YJL178C STU1P38198 1513 aa4.44□□□□□ -1.7
ATG27YJL178C BPT1P14772 1559 aa4.44□□□□□ -1.7
ATG27YJL178C SCC2Q04002 1493 aa4.43□□□□□ -1.7
ATG27YJL178C DIF1O13577 133 aa4.43□□□□□ -1.7
ATG27YJL178C RAD18P10862 487 aa4.43□□□□□ -1.7
ATG27YJL178C GSY1P23337 708 aa4.43□□□□□ -1.7
ATG27YJL178C VHR1P40522 640 aa4.43□□□□□ -1.7
ATG27YJL178C SHR5P41912 237 aa4.43□□□□□ -1.7
ATG27YJL178C SSY5P47002 699 aa4.43□□□□□ -1.7
ATG27YJL178C MRPS35P53292 345 aa4.43□□□□□ -1.7
ATG27YJL178C TFB2Q02939 513 aa4.43□□□□□ -1.7
ATG27YJL178C PKH1Q03407 766 aa4.43□□□□□ -1.7
ATG27YJL178C CRR1Q05790 422 aa4.43□□□□□ -1.7
ATG27YJL178C YOL073CQ08232 322 aa4.43□□□□□ -1.7
ATG27YJL178C SRD1P09007 221 aa4.42□□□□□ -1.7
ATG27YJL178C ERG4P25340 473 aa4.42□□□□□ -1.7
ATG27YJL178C STO1P34160 861 aaKnown RBP4.42□□□□□ -1.7
ATG27YJL178C RPP1P38786 293 aa4.42□□□□□ -1.7
ATG27YJL178C CAF16P43569 289 aa4.42□□□□□ -1.7
ATG27YJL178C DNM1P54861 757 aa4.42□□□□□ -1.7
ATG27YJL178C GIS1Q03833 894 aa4.42□□□□□ -1.7
ATG27YJL178C MUS81Q04149 632 aaPredicted RBP4.42□□□□□ -1.7
ATG27YJL178C ASM4Q05166 528 aa4.42□□□□□ -1.7
ATG27YJL178C NOP14Q99207 810 aaKnown RBP4.42□□□□□ -1.7
ATG27YJL178C RKR1Q04781 1562 aa4.41□□□□□ -1.7
ATG27YJL178C MET3P08536 511 aa4.41□□□□□ -1.7
ATG27YJL178C SAK1P38990 1142 aa4.41□□□□□ -1.7
Retrieved 100 of 5,963 RNA–protein pairs in 10.1 ms